Solanum lycopersicum mRNA Solyc04g049090.2.1
 mRNA details
|
| Name | Type |
Length
1,878
|
Organism |
|
Description
MLO-like protein 17 (AHRD V1 ***- C6EWF0_VITVI); contains Interpro domain(s) IPR004326 Mlo-related protein
|
|
Location(s)
SL2.50ch04:39552675..39558181
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| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0016021
- Length
- 5507
- Nb exon
- 15
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc04g049090.2.1 MLO-like protein 17 (AHRD V1 ***- C6EWF0_VITVI); contains Interpro domain(s) IPR004326 Mlo-related protein
GACTTATTGTTTGAAACTTGCAACTACAATTCTTCTTTATCATCATTTGACATTTCCCCTTCTTCTTATTCCTATTTTTATTTAAATATAGGAATATTTCTTTCAAAGGAAGAAAATATATATTTCCTTCAACACCACTATATATAGACTTAATTCCATAATCCTGTTAATTTAATTGATGGCTAAAGAACGGTCTATGGAGGCAACCCCTACGTGGGCAATTGCTGTGGTTTGCTTCATCTTGCTCGCTATTTCTATTTTTATTGAACAAATTATTCATCACATTGGAGAGTGGTTACTGGAAAAGCGGAAAAAGTCTCTATATGAAGCACTTGAAAAGATCAAAGCTGAACTTATGCTGTTGGGATTCTTATCACTGTTGTTGACAGTGTTGCAAGATCCAGTTTCTAACTTATGTGTCCCCAAGAGTGTTGGTTATTCATGGCATCCTTGTATGGCAAAGGAAGATGCCAAGTCTGAGTATGATGACCCTTGTCTACCAAAGGGAAAAGTGCAATTTGCATCTTCATATGCAATACACCAGCTCCATATCTTCATCTTTGTATTGGCAGTTGCTCATGTATTGTACTGTATAGCAACTTTTGCTTTGGGCAGGCTAAAGATGAGAAAATGGAGGGCATGGGAGGATGAAACAAAAACAATGGAGTACCAATTCTACAACGACCCTGAGAGATTCAGATTTGCAAGGGAGACCTCGTTTGGACGTAGGCATTTGCATTTCTGGAGCAAGTCCCCCGTGTTGCTCTCGATAGTTTGTTTCTTTCGGCAATTCTTCTCATCAGTTGCAAAAGTTGACTATTTAACCCTTAGACATGGGTTCATGATGGCACATTTAACTCCACAAAATCAAAATAATTTTGATTTTCAATTATACATTAACAGAGCAGTTGACAAAGACTTCAAAGTTGTTGTTGGAATAAGTCCTGCATTATGGCTCTTCACGGTGCTATATTTTCTGACTACTACCGATCGATTGTACTCGTATCTTTGGGTGCCATTTATCCCACTTGTAATAATATTGCTAGTTGGCACAAAACTTCAAATGATCATAACAGAAATGGGAGTAAGGATTTCAGAAAGGGGAGACATAGTAAAAGGTGTACCTGTGGTGGAGACTGGTGACCATCTTTTCTGGTTTAATCGCCCTGCCCTTGTCCTATTCTTGATTAACTTTGTACTCTTTCAGAATGCGTTTCAAGTTGCTTTCTTTTTTTGGAGTTGGTGGAAATTTGGTTTCCCATCTTGCTTTCATAAGAATGCTGCAGACCTAGCCATAAGGCTAACCATGGGGGTGATCATACAGGTCCATTGCAGCTATGTGACTCTCCCTCTTTATGCCTTAGTTACACAGATGGGTTCATCAATGAAGCCTATCATCTTTGGTGATAATGTGGCAACAGCTCTTAGAAGCTGGCACCATACAGCGAAAAAACGGGTGAAACATGGGCTATCAGGACATACCACCCCTGCAAACAGCAGACCAACCACACCATTGCGTGGTACCTCCCCTGTTCACTTATTACGCGGTTATCCACAATATAATGAGGACAGTGTTCAAGCATCTCCTCGGACATCCAATGTCGAAAATGAAGGGTGGGCTAATGAAAATCAGGAGGGAGAGATCCTGCAGCATGCCTCCACTGATCATAACAAGCAAATTGAGATTACAATGTCAGATTTTACTTTTGGAAACAAATAAATGTAAAAACGAATTTTCTTCTTCATTGTTTTAAGTTCATTACTGTAGTTCAAATGGCAATGATTTTGTAAAATTTTATACAGAGGTACTCATGCATGGTGCTCTTCATTTCAAGGTAAGAACCTTCTTATATCGATTTATAGCTACTTTACATCTCA
GACTTATTGTTTGAAACTTGCAACTACAATTCTTCTTTATCATCATTTGACATTTCCCCTTCTTCTTATTCCTATTTTTATTTAAATATAGGAATATTTCTTTCAAAGGAAGAAAATATATATTTCCTTCAACACCACTATATATAGACTTAATTCCATAATCCTGTTAATTTAATTGATGGCTAAAGAACGGTCTATGGAGGCAACCCCTACGTGGGCAATTGCTGTGGTTTGCTTCATCTTGCTCGCTATTTCTATTTTTATTGAACAAATTATTCATCACATTGGAGAGTGGTTACTGGAAAAGCGGAAAAAGTCTCTATATGAAGCACTTGAAAAGATCAAAGCTGAACTTATGCTGTTGGGATTCTTATCACTGTTGTTGACAGTGTTGCAAGATCCAGTTTCTAACTTATGTGTCCCCAAGAGTGTTGGTTATTCATGGCATCCTTGTATGGCAAAGGAAGATGCCAAGTCTGAGTATGATGACCCTTGTCTACCAAAGGGAAAAGTGCAATTTGCATCTTCATATGCAATACACCAGCTCCATATCTTCATCTTTGTATTGGCAGTTGCTCATGTATTGTACTGTATAGCAACTTTTGCTTTGGGCAGGCTAAAGATGAGAAAATGGAGGGCATGGGAGGATGAAACAAAAACAATGGAGTACCAATTCTACAACGACCCTGAGAGATTCAGATTTGCAAGGGAGACCTCGTTTGGACGTAGGCATTTGCATTTCTGGAGCAAGTCCCCCGTGTTGCTCTCGATAGTTTGTTTCTTTCGGCAATTCTTCTCATCAGTTGCAAAAGTTGACTATTTAACCCTTAGACATGGGTTCATGATGGCACATTTAACTCCACAAAATCAAAATAATTTTGATTTTCAATTATACATTAACAGAGCAGTTGACAAAGACTTCAAAGTTGTTGTTGGAATAAGTCCTGCATTATGGCTCTTCACGGTGCTATATTTTCTGACTACTACCGATCGATTGTACTCGTATCTTTGGGTGCCATTTATCCCACTTGTAATAATATTGCTAGTTGGCACAAAACTTCAAATGATCATAACAGAAATGGGAGTAAGGATTTCAGAAAGGGGAGACATAGTAAAAGGTGTACCTGTGGTGGAGACTGGTGACCATCTTTTCTGGTTTAATCGCCCTGCCCTTGTCCTATTCTTGATTAACTTTGTACTCTTTCAGAATGCGTTTCAAGTTGCTTTCTTTTTTTGGAGTTGGTGGAAATTTGGTTTCCCATCTTGCTTTCATAAGAATGCTGCAGACCTAGCCATAAGGCTAACCATGGGGGTGATCATACAGGTCCATTGCAGCTATGTGACTCTCCCTCTTTATGCCTTAGTTACACAGATGGGTTCATCAATGAAGCCTATCATCTTTGGTGATAATGTGGCAACAGCTCTTAGAAGCTGGCACCATACAGCGAAAAAACGGGTGAAACATGGGCTATCAGGACATACCACCCCTGCAAACAGCAGACCAACCACACCATTGCGTGGTACCTCCCCTGTTCACTTATTACGCGGTTATCCACAATATAATGAGGACAGTGTTCAAGCATCTCCTCGGACATCCAATGTCGAAAATGAAGGGTGGGCTAATGAAAATCAGGAGGGAGAGATCCTGCAGCATGCCTCCACTGATCATAACAAGCAAATTGAGATTACAATGTCAGATTTTACTTTTGGAAACAAATAAATGTAAAAACGAATTTTCTTCTTCATTGTTTTAAGTTCATTACTGTAGTTCAAATGGCAATGATTTTGTAAAATTTTATACAGAGGTACTCATGCATGGTGCTCTTCATTTCAAGGTAAGAACCTTCTTATATCGATTTATAGCTACTTTACATCTCA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc04g049090.2.1 | SL2.50ch04:39552832..39557985 | 508 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc04g049090.2 | SL2.50ch04:39552675..39558181 | 5,507 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc04g049090.2.1.1 | SL2.50ch04:39557890..39558181 | 292 | - | n/a |
| exon | exon:Solyc04g049090.2.1.10 | SL2.50ch04:39554175..39554215 | 41 | - | n/a |
| exon | exon:Solyc04g049090.2.1.11 | SL2.50ch04:39553908..39554081 | 174 | - | n/a |
| exon | exon:Solyc04g049090.2.1.12 | SL2.50ch04:39553646..39553681 | 36 | - | n/a |
| exon | exon:Solyc04g049090.2.1.13 | SL2.50ch04:39553485..39553552 | 68 | - | 1 |
| exon | exon:Solyc04g049090.2.1.14 | SL2.50ch04:39553274..39553334 | 61 | - | n/a |
| exon | exon:Solyc04g049090.2.1.15 | SL2.50ch04:39552675..39553180 | 506 | - | n/a |
| exon | exon:Solyc04g049090.2.1.2 | SL2.50ch04:39557742..39557799 | 58 | - | 2 |
| exon | exon:Solyc04g049090.2.1.3 | SL2.50ch04:39557496..39557650 | 155 | - | n/a |
| exon | exon:Solyc04g049090.2.1.4 | SL2.50ch04:39557063..39557179 | 117 | - | n/a |
| exon | exon:Solyc04g049090.2.1.5 | SL2.50ch04:39556904..39556964 | 61 | - | 2 |
| exon | exon:Solyc04g049090.2.1.6 | SL2.50ch04:39555730..39555818 | 89 | - | n/a |
| exon | exon:Solyc04g049090.2.1.7 | SL2.50ch04:39555129..39555203 | 75 | - | n/a |
| exon | exon:Solyc04g049090.2.1.8 | SL2.50ch04:39554936..39555030 | 95 | - | 1 |
| exon | exon:Solyc04g049090.2.1.9 | SL2.50ch04:39554506..39554555 | 50 | - | 2 |
| intron | intron:Solyc04g049090.2.1.10 | SL2.50ch04:39554216..39554505 | n/a | - | n/a |
| intron | intron:Solyc04g049090.2.1.11 | SL2.50ch04:39554082..39554174 | n/a | - | n/a |
| intron | intron:Solyc04g049090.2.1.12 | SL2.50ch04:39553682..39553907 | n/a | - | n/a |
| intron | intron:Solyc04g049090.2.1.13 | SL2.50ch04:39553553..39553645 | n/a | - | n/a |
| intron | intron:Solyc04g049090.2.1.14 | SL2.50ch04:39553335..39553484 | n/a | - | n/a |
| intron | intron:Solyc04g049090.2.1.15 | SL2.50ch04:39553181..39553273 | n/a | - | n/a |
| intron | intron:Solyc04g049090.2.1.2 | SL2.50ch04:39557800..39557889 | n/a | - | n/a |
| intron | intron:Solyc04g049090.2.1.3 | SL2.50ch04:39557651..39557741 | n/a | - | n/a |
| intron | intron:Solyc04g049090.2.1.4 | SL2.50ch04:39557180..39557495 | n/a | - | n/a |
| intron | intron:Solyc04g049090.2.1.5 | SL2.50ch04:39556965..39557062 | n/a | - | n/a |
| intron | intron:Solyc04g049090.2.1.6 | SL2.50ch04:39555819..39556903 | n/a | - | n/a |
| intron | intron:Solyc04g049090.2.1.7 | SL2.50ch04:39555204..39555729 | n/a | - | n/a |
| intron | intron:Solyc04g049090.2.1.8 | SL2.50ch04:39555031..39555128 | n/a | - | n/a |
| intron | intron:Solyc04g049090.2.1.9 | SL2.50ch04:39554556..39554935 | n/a | - | n/a |
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