Solanum lycopersicum mRNA Solyc04g050960.2.1

mRNA details  
Name
Solyc04g050960.2.1
Type
mRNA
Length
2,820
Organism
Solanum lycopersicum
Description
Chromatin remodeling complex subunit (AHRD V1 *--- B9N3S4_POPTR); contains Interpro domain(s) IPR012287 Homeodomain-related
Location(s)
SL2.50ch04:49119343..49125671
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0045449
Length
6329
Nb exon
6
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g050960.2.1 Chromatin remodeling complex subunit (AHRD V1 *--- B9N3S4_POPTR); contains Interpro domain(s) IPR012287 Homeodomain-related

ATGATTCGGAAAAAAGTGTTCTTGACTTACAAGCGAAAGAGGCTACCAGGTTCTGATCTTTTTTTGGAAAATGGGACTCATAATACACCTACTGAGTGTATGAAATCAAAAGCTGTGGCCCCTTTGCTGGAGGAAGAGGAGAAGTATGACAACCCTAGCTTCAAGGATGGAAAGAAAGACTTTGAGGATAATTCTGAAGAAAATCAGTCCTCAAAGGGTTCCAAAGGGCCTCTCTCTGAAGGAGAACCAAGGAATTCACAGAAGAGATTATGTTCTTGCATTATTTCAGGCAGTATATGTGATAGTAAATGCACCCAGAAGTTTTCTCTTTCCCTGTTGACAGGATTGAATTCTTCGAGAGAACAGGATTTGGTCTCCCCAAGTTCTGGTGGTGATGAGAGGGGATGCGATCTTAAGGATTCTGATTCCTCTGATTTGGTTAAACTGAGTCTGGAAGAAGTTGCCACACCAAAAGACATCTCTCTGATCCCCTCTGTAAATGCAGTTAGTACAAGTAAATTGTCTTCCAGTCTGATTACTTTTCAGCGAAGAGCTAAGCGGGACAAGGATGCAGGCCGGGCATATGCCAAGGGCAATCTTGAAGCTGAAGATGTTGCTTGCTTATCAGTTGAAAATACTGCATGTCTTGTCGCTCCTCATGACTCTGATAAATCAGTTGCTAAGAGTTGCTCAGTGGATCTTTCAGCAGATTTTAAGCATCCAGAGACAACCAACGGAGGTGAGAATTATCAATGTGCTTGTGCTGGATCACCTGCACAGATGAAGATATTGTTAGATGTTAATGAACAGCCTATCTTAGTGAAGGAAGCTCAGCCAATCGATGAAGTAGCTGATCCAAATTCTGGAGTAGGCTTCTCTGGTTTGGACGACGGTGTTGCTTCAGATACTTTCAAGAAGTCATCATTTCATAGCCCTAAGGACCCTTCTTTTGATGGTTTGTCCAGAACTGAAGTGCCAATATCGTCTCCCTTAGAGGTTGCAAGTAACACTGGTTCCCAAGCTTTAGATATATCTATACCTTGTGATAGTGATGACACAATGGACTGCAATAGGTCGGAACAAGCATCTGATGAACGCCTCATCCCAACAGCACTGGAAGTTCAGCAGAACCCTCCTTGCTTCTTGAATGGAAATAATTCGACGGTTTTACATAGGGTGCCTTCGGACAAAAGTTTGGAATTACTTGACATCAAGCCCGAGAAGATAACTCCAATTCATGCAGAGTTGCCTGAAGCTGGTTGCTTATCTGAAAAAGCAATGGCTGATAGTGGTGAAAGCAGTTCTTCGAAAAATGATTTACTGCAGCTTTTGTCGGAAGATAGAACCTACAACTTTTTCCCATTAGCAAGCCTGCAGGAAAATGAGAGTGCTCATGTTAATTCTAAAGAAGGAAAAGCTTCCTCATTAGAAGAGAAGAGACATTGTGCATTTACTGTAGCAGAATCCTCAGATTTTCTTGGTTTGTCACTGCCAAGTCAAGCTTTAGCTTCGAGATCCTTACAGTTGGCTGACATATGGAATCAACCAAGCGAATCCATTCAAGGAGCAGCTTCTCAGGTTTCTGTTGATGCATCAATACTTCATCGACATCAAATGATCCTGGACAACATTCTTAACAGAGGAAGATCTCAAAACGGAAACAAGAGGAGATTTGCAGAAAAATTAGGGACTCCAAACATGTGGTCAGAAGAGGAGCTAGATTCTCTTTGGATTGGTGTGAGGCGGCATGGAAGAGGTAACTGGGATGTGATGTTGAGGGATCCAAGGCTGCGCTTTTTTTCGTGGAGGACGCCAACAGACTTGGCAGAACAGTGGATGGAGGAACAGTCGAAACTTTTACATGGAAAATCCATTTCCCCTGTGAGACAGTTACATAAAGCTGATGTTTCATCCCATGGTATGGATGATGTTAAACTTTCACTTGGGCATGCACATTCCCAGTCAGGAGACAACATCCGGAGCCAAATACCATTTCATTTTCCAGATGTTCAAAATACTTCGCAAAAATTACTTCACCTGGCTACAACAAATGTAGGGACCTTAGATTCTCTCTGTCTCAGGGGAAACCGCAAAAGAGCTAAGTTCAACCAATCCGAGAACTCTGCAGGTTCAGGTGTTGAATGTTCATTCAGTTCTCGAATTATGAGCAGAGTGTCTGAAGTAGGTAATTTGCCTCACTGGCTCAAGGAAGTGGTTGCAATCCCACCCAGGCCTCCTGGATTTGCCCCAGATTCTTCATGGTTTATCCATCCATGGATTGGTCCACCGTTTTCTGAACCTAAGCGAGCTCACTGTGAATCAAGGAACAGATTGAGCGACTTGTACACTACACCAAAAACTGAGCTGAATAATGGTAATGCTGATTGTGCTCATCTCCCTATAAGAGAAGGGAAGCAACATTGTAAGTCAGAAGCAGATAAAAAAGTTGAGCTGATTGTCATCAATAGCGACGCCTCATCAGAGGAGACAATATCAGATGATTGTAATGTAAGGCATTAGCTTAAGTTGGGATTTCATAGTTCAACAATGGTTAAACTTGTATAAAAGTAGTTTAAGTATCTCAGCTATTTCTCGAGGGTGAGATTAGTTGAATCAGGTAGTTTTTATTTTCCCAAATTCTTATTTTAGCTATTTGCTGGTAAGCTATGTTGTAAACTCACTTTAGGTCCTAATTAGGGATTGGATCAAAGCCAAGCAAATCCAAACTCCTTCATAAACTCAAGGCTGGTAAGCTTTCTACCTATGGAAAATGTGATAAAATCCCAGGCCGATAATCATTATAGTGAGAGTTTGGCATGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g050960.2.1SL2.50ch04:49119342..49125371840+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g050960.2SL2.50ch04:49119343..491256716,329+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g050960.2.1.1SL2.50ch04:49119343..49119528186+n/a
exonexon:Solyc04g050960.2.1.2SL2.50ch04:49121507..49122046540+n/a
exonexon:Solyc04g050960.2.1.3SL2.50ch04:49123206..4912326762+n/a
exonexon:Solyc04g050960.2.1.4SL2.50ch04:49123396..49123652257+1
exonexon:Solyc04g050960.2.1.5SL2.50ch04:49123772..49124052281+2
exonexon:Solyc04g050960.2.1.6SL2.50ch04:49124178..491256711,494+n/a
intronintron:Solyc04g050960.2.1.1SL2.50ch04:49119529..49121506n/a+n/a
intronintron:Solyc04g050960.2.1.2SL2.50ch04:49122047..49123205n/a+n/a
intronintron:Solyc04g050960.2.1.3SL2.50ch04:49123268..49123395n/a+n/a
intronintron:Solyc04g050960.2.1.4SL2.50ch04:49123653..49123771n/a+n/a
intronintron:Solyc04g050960.2.1.5SL2.50ch04:49124053..49124177n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17796318%2Fdetails feature 17796318
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