Solanum lycopersicum mRNA Solyc04g055000.2.1

mRNA details  
Name
Solyc04g055000.2.1
Type
mRNA
Length
1,906
Organism
Solanum lycopersicum
Description
Tetratricopeptide repeat protein 4 homolog (AHRD V1 *--- TTC4_DICDI); contains Interpro domain(s) IPR015609 Molecular chaperone, heat shock protein, Hsp40, DnaJ
Location(s)
SL2.50ch04:53530227..53533608
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005488
Length
3382
Nb exon
5
Sifter term
GO:0030544
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g055000.2.1 Tetratricopeptide repeat protein 4 homolog (AHRD V1 *--- TTC4_DICDI); contains Interpro domain(s) IPR015609 Molecular chaperone, heat shock protein, Hsp40, DnaJ

ATGGGTGATGAAAGGAAAACAGGTTGTGGCCTGTTGAACGCTGTTTTTGGAAGGAAAACTATGTGGACAAAAAGATCGACATCAACAGGTTCGCTTCCAACTCCAAATTCCAGCAATGGTAACAATTTAACGCGATCATCTAGTACTCAAAATTCTAAAAAGCATCGGAATGGATCCAACGAGGCTTTTTTAGACAACGAGAAACAAGCTGATAGGATCATACCAAGACCTAATCCAAATCAATCCAAAGTAGCTGCGAATAAGGGTAATGTGCAAGGTGCTGCTGCTGCACCTGTTTATAATCAGCAGAAAACTAATGGTCAAGGGTATAATAATCAAGGAAGAAAAGTAGTTCCGCCATCAACCGGGATATCAGGGGAGCTTGAAAACATGATACAAGATCATCAAAGATCAAATGGTGCTAATACATTAGTTCGTGCATCGTCTAGCAATGTGATGTTGTTTGGTAATTTGGGTAACATAAGGCAGCAAGGTGGGGGCAATGCTACAACAACTTCAACAGCGAATCATGTTCTTGATTATTTACCAAGAACGGCTAAAGAAGAACCACAACAACAACCATCTCAGAATGGGAAATACCCGACGAGTGTTATGGGTAATGTAGTAAAGAAAAAGGGTGATCAAGAACAGGGGAAAACAGGGGGCTCTGTTTCCCTTTGTCGCGCTTTATCCACTAGAATGGACCCTGAGCAATTGAAGATTCTTGGAAATGAAGATTACAAGAATGGAAGATTTGCTGAGGCTTTAGCTTTGTATGATGCTGCAATTTCAATTGATCCAAATAAGGCTTCTTATCGAAGCAACAAATCCGCTGCTTTGACTGCTTTAGGAAGGCTTCTAGAAGCTGTTTTTGAGTGCAGAGAAGCTATATCAATTGATCCTCATTATCAAAGAGCTCATAATCGTTTGGCCACTCTATGTGTCAGATTAGGAGATACAGAGAAAGCTATGTACCATTACAAACTAGCTGCATCAGAAGCTGATCCTGATGTTGTGACAAAGTCTAAATCTATTCAAATGCATCTTAGCAAGTGTACTGAAGCGAAGAGGCAAAGAGATTGGAACACTCTTCTTAAAGAATCTGCCCTCGCCATATCGGCTGGTGCAGATTCTGCACCACAGATATTTGCTTTGAAAGCGGAGGCATTGGTGAAGCTCCATAGATACCATGAAGCAGATCAAACTCTGAAGCATGGTCCGAATTTTGATATCGATGAATGTATAAAGTTCTTTGGCCCTATTGGCAACGCAGGCTTGTTAGTCATTCAAGCTCAAGTTGACATGGCTGCTGGCAGGATTGACGATGCCCTAGCAGCGGCTCAACGAGCATCGCAACTAGATGGGAATAACAAGGAAGTGAACATGATAGTTAGGAGGACAAGGGGAGTAGCAAGTGCTAGAACAAAGGGAAATGAGTTGTTTAAAGGTGGAAAATATGGAGATGCTAGTGTTGCTTATGGTGAAGGACTAGAGCATGATCCACACAACTCAGTTTTATTGTGCAACAGAGCAGCTTGCAGATCAAAACTTGGCCAATTTGAGAAAGCACTTGAGGATTGCAATACTGCCCTTAATGTTAGACCATCTTTCACCAAAGCTAGGTTGAGGAAGGCTGATTGTTACTTTAAGATGGGAAAATGGGAAGCATGCGTACAAGAATGTGAAGTGTTGATAAAGGAGACACCAGAAAATGAGGATGTGGGACAAATGATTAAGGATGCCCAACAACAACTCAAAAAATGAGGAATTTGTCAAAGACATGAAGAGCATGAACACCACACAATGACATTTATGGTTGTCCATAACAAAGTAATTTGAATTGTATCATCACTTGTTTGTTCAATTCCAATCCCTCCATAAAAGGAAACAAAAGGGTCAAATATAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g055000.2.1SL2.50ch04:53530368..53533608588-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g055000.2SL2.50ch04:53530227..535336083,382-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g055000.2.1.1SL2.50ch04:53532662..53533608947-1
exonexon:Solyc04g055000.2.1.2SL2.50ch04:53532376..53532571196-n/a
exonexon:Solyc04g055000.2.1.3SL2.50ch04:53532099..53532271173-1
exonexon:Solyc04g055000.2.1.4SL2.50ch04:53531201..53531534334-n/a
exonexon:Solyc04g055000.2.1.5SL2.50ch04:53530227..53530482256-n/a
intronintron:Solyc04g055000.2.1.2SL2.50ch04:53532572..53532661n/a-n/a
intronintron:Solyc04g055000.2.1.3SL2.50ch04:53532272..53532375n/a-n/a
intronintron:Solyc04g055000.2.1.4SL2.50ch04:53531535..53532098n/a-n/a
intronintron:Solyc04g055000.2.1.5SL2.50ch04:53530483..53531200n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17798192%2Fdetails feature 17798192
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