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Solanum lycopersicum mRNA Solyc04g074180.2.1

mRNA details  
Name
Solyc04g074180.2.1
Type
mRNA
Length
3,279
Organism
Solanum lycopersicum
Description
Cryptochrome 1a
Location(s)
SL2.50ch04:60179158..60184539
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006281
Length
5382
Nb exon
5
Sifter term
GO:0042803
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g074180.2.1 Cryptochrome 1a

TGGAGAGGTTTGTTTTTTTGGGTGGACAATGCCTATAGTAACTTCACAAGAATAGCATCTCATCATTCATCAAAGAATAACATTTGGGGTTTGTTAAAGTTAGGTTCTTTACTAGAATTTGCCTAAAAAAAATCATCTTTGTAATCTTTATCTCCTCAGTGAAAGCTACAGGGAACAGTCAAAGTATAGATAAGATTAACCCCAATATACTTCTGTCTAAGAAAGACTCAATAACATGGTGTTTACATAGTAAGAGAGAAAAATAGAGAGAAAAAGACTAGTCTTTGGTGTTGTTGAAGGAAGATGTCAGGTGGTGGTTGTAGCATAGTATGGTTTAGAAGGGATCTGAGAGTGGAAGATAACCCTGCTTTGGCTGCTGGAGTTAGAGCAGGGGCAGTTATTGCTGTGTTTATTTATGCTCCTGAAGAAGAAGGGCATTATTATCCTGGTAGAGTTTCAAGATGGTGGCTTAAGCAGAGTTTGGCTCATCTTGATTCATCTTTGAAGAGTCTTGGAACCTCCCTTATTACAAAGAGATCTACTGATAGTATTTCTTCTCTTCTTGAAGTTGTTAAATCTACTGGTGCTACTCAGCTCTTCTTCAATCATTTGTATGATCCTATTTCACTTGTGAGAGATCATCGCACAAAAGAAATCTTAACAGCTCAAGGTATATCAGTGCGTTCCTTTAATGCTGATTTGCTCTATGAACCATGGGAAGTTAATGACGATGAAGGTCGCCCGTTCACAACATTTTCTGCTTTTTGGGAGAAATGCCTTAGCATGCCTTATGATCCAGAAGCTCCACTTCTTCCTCCCAAAAGGATTATATCTGGTGATGCATCAAGATGCCCTTCAGACAACTTGGTATTTGAAGATGAATCAGAGAAAGGAAGCAATGCACTTCTTGCTCGGGCATGGTCACCTGGCTGGAGTAATGCTGATAAAGCACTAACTACTTTCGTTAATGGACCATTACTTGAGTACTCGCAGAACCGTCGGAAAGCTGATAGTGCAACAACATCCTTTCTATCTCCACATTTACATTTTGGGGAAGTCAGTGTTCGTAAGGTATTCCATTTTGTTCGCATCAAGCAAGTTCTCTGGGCCAATGAAGGAAATAAAGCTGGTGAAGAGAGTGTTAATTTGTTCCTTAAGTCCATTGGGCTGAGGGAGTACTCAAGATACATGAGTTTTAATCATCCTTATAGCCATGAAAGGCCCCTTCTTGGTCACCTAAGGTACTTCCCATGGGTAGTGGATGAAGGCTACTTTAAGGCATGGAGACAAGGTAGAACAGGTTATCCTTTGGTTGATGCTGGTATGAGAGAGTTATGGGCAACTGGTTGGCTTCATGATCGTATCCGAGTCGTGGTATCTAGTTTCTTTGTGAAGGTTCTGCAGCTTCCATGGAGGTGGGGGATGAAGTATTTTTGGGACACATTGTTAGATGCAGATCTTGAGAGTGATGCTCTTGGTTGGCAATATATCTCTGGTACCCTACCTGATGGTCGTGAGCTTGATCGGATTGATAATCCACAGTTTGTGGGATACAAGTGTGACCCTCATGGGGAATATGTCCGGCGGTGGCTTCCTGAACTTGCTAGGCTGCCCACCGAATGGATACACCATCCATGGAATGCACCAGAATCTGTGCTTGAAGCTGCTGGCATTGAGCTGGGTTCCAATTATCCTCTTCCTATAGTTGAAATTGATTCAGCAAAAGTTAGACTAGAACAAGCCCTATCACAAATGTGGCAGAATGATGCAGCTGCAAGAGCTGCGATTGAGAATGGTATGGAAGAAGGACATGGTGACTCTGCTGACTCCCCAATAGCATTTCCTCAGGCCATGCATATGGAAATGGACCATGAACCAGTCAGGAACAACCCTGTAATAGTTACTGTTCGACGCTATGAAGATCAAATGGTGCCAAGCATGACGTCATCTTTGTTCAGAGCTGAAGATGAAGAGAACTCCGTGGACATTAGGAATTCAGTTGTGGAAAGTAGGGCAGAAGTTCCAACAGACATCAATGTAGCTGAAGTTCATAGGAGAGACACGCGTGACCAAGCCGTCATGCAAACTGCTCGAACCAATGCTACCCCACATTTTAATTTTGCGGTAGGTAGGAGGAATTCTGAAGATTCAACAGCAGAATCTTCCAGTAGTACTAGAGAAAGGGATGGGGGTGTAGTGCCTACATGGTCTCCCTCAAGTAGTAACTATTCGGACCAATATGTTGGTGATGATAATGGTATTGGGACCAGTTCATCTTACTTGCAAAGGCATCCACAATCTCACCAGCTAATGAACTGGCAGCGGCTTTCTCAAACAGGGTAAGCTACGTGAGTTTCTTGAATAATCAGTAGAAGAAGACATTCATCCAAAAGAGATGAAAACTAGGAAATGGACAAATTTGAACATTCCAGTTTGAATATAAGCATTAGTGTTGCATCTAGCACAAACAAACATGACTACTCATGAATGGCACTAGTCACAGATTCACGGATAACATTTCTCATGTCCTTCATATTTCCTGTATGTCATGGTTAGCTGGTGAAAAAGCATTGCAAATTGCATAAAATTTTAGGCCAGTGAGAAGTCCTACATGAAAAGTCTGATTTAAACAAACGCAAGCAAATATGAATTGTGCTTCCTTTAAACTAACTGCAGACACATCTGTATACAAATATGGTGCATATTTCCATTTTTAAGGCCTTAGGCTCAAGACGACCACCTTGAAATTTCCAGGAAATGTCTTATCCTTTGGCTTGTTTAACTTGCTTACAGGTGATCATTTATGTGGAGTTACGATAGCAACAAGGCGGAGAAGCAAGTGGCTAATACAGACATTTGGCTCAGCACATTTAGTACAGCATTCATCTACTCTTTCTCTCATAGTCCTGACCTGATCAGCCATCTTTGTGTCTATATCTCTAATTGATCAGGTGGTTCGTCTGGATTTTCATCCTCATCTGTCGGGCATCCCCATTTACCTATTATACCATATATGTGTCTCTGCTGTATAGTATAGAAGTTTTTCATAAGGCCAAATAAGTGTTAGAAAGAGGTTGCAGTCCTCTGTCAAGCTCACACTTGTGCCTTTTGTTTTTCCTTCTCTTTTCTGCTACTTACATTTTGATGGCAATAACGATTATCTGAAGTCCTGGAACTAATTAGATTTTTGTGGATATCATAGTTTCAAACTCTGTTTGACGGATGTACATGTGGTTTAAGCAGCTTCATCTCATATTTTTGTTAAAAAGAAAAAAAAAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g074180.2.1SL2.50ch04:60179460..60183273680+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g074180.2SL2.50ch04:60179158..601845395,382+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g074180.2.1.1SL2.50ch04:60179158..60179773616+n/a
exonexon:Solyc04g074180.2.1.2SL2.50ch04:60180388..60180606219+n/a
exonexon:Solyc04g074180.2.1.3SL2.50ch04:60181168..60181874707+2
exonexon:Solyc04g074180.2.1.4SL2.50ch04:60182473..601841931,721+2
exonexon:Solyc04g074180.2.1.5SL2.50ch04:60184524..6018453916+n/a
intronintron:Solyc04g074180.2.1.1SL2.50ch04:60179774..60180387n/a+n/a
intronintron:Solyc04g074180.2.1.2SL2.50ch04:60180607..60181167n/a+n/a
intronintron:Solyc04g074180.2.1.3SL2.50ch04:60181875..60182472n/a+n/a
intronintron:Solyc04g074180.2.1.4SL2.50ch04:60184194..60184523n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17802736%2Fdetails feature 17802736
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