Solanum lycopersicum mRNA Solyc04g076300.2.1

mRNA details  
Name
Solyc04g076300.2.1
Type
mRNA
Length
2,600
Organism
Solanum lycopersicum
Description
Transporter small conductance mechanosensitive ion channel (MscS) family (AHRD V1 *-** A7ZLG1_ECO24); contains Interpro domain(s) IPR006685 Mechanosensitive ion channel MscS
Location(s)
SL2.50ch04:61214967..61222963
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016020
Length
7997
Nb exon
14
Sifter term
GO:0005216
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g076300.2.1 Transporter small conductance mechanosensitive ion channel (MscS) family (AHRD V1 *-** A7ZLG1_ECO24); contains Interpro domain(s) IPR006685 Mechanosensitive ion channel MscS

TTTCAGTTTTTTTCACGCAACTGTAGCCGTCGGTGTTTTCCGTGTTGCCCAGCATCTTCCTCCGCCATTCCATTGATAAACGAAGATCTACTACCATTTTTTCAAGTGAAGTTGCTTCACTAATATCATCGATTGTATTGGTTTTCAGGTTCAGAAGATATAAAGGTTCTTACCATATGCAATTTAACATTGTGACTTTTGGGTGTCATTTCTTTAAGCATATTAGAAAATGGCAGTTTCTGTGTCACTGCTGCTGCCCCGTGAATTGGGTATTCACGGAAAATGTGGACTAAGCGGTCAGTCTAAGGGCAAGATGAGCAGGAGTCAGACAGATTCTTGCAGCATATTTCTGTCGTCACATTCTATGCGGCAGGATCCTTGGAGCATCTACCTTCTGAATACTGTACACAGGCCTTTGTTTTCCCATCCTTCACCAACTAGATGTAATGTATTACTATGCCGCTCCTTGCTAAAGCCAGGTGGAGGATATGAGAGTCAAGTTCTGGAAACAGCAACACTGATTTGGAAAAGGTCATTAAGTACTATACATGGAAGCCCACTTGTGCTTCAGCTGATTCCGGCCATTGGTGTTCTTGTTTTTGCTGCATGGGGTCTCACTCCACTGATGCGCTTTGGAAGAAAGCTTTTCCTTCATGAAAGTGATAGCAATTGGAAACAGAGTAGCTGGCATTATGTTACAGCTTCCTATCTTAAACCTGTGCTTTTATGGACTGGAGCAATACTTATATGCAGAGCAATAGATCCACTGGTTCTACCTACAGTTTCTAGCCAGGCAGTCAAGCAAAGATTTCTTAATTTTATACGATCATTATCGACAGTGATGGCACTTGCCTACTGTTTATCTAGCTTGATTCAGCAAACACAAAAATTCCTCGTGGAGACAAAAGACCCTGCTGATGCAAGAAATATGGGGTTCGAATTTGCAGGGAAAGCTATATATACTGCAGTATGGGTTGCTGCCGTTTCATTGTTCATGGAATTGCTTGGTTTTTCTACACAGAAGTGGCTGACAGCTGGGGGTCTTGGGACAGTATTGCTCACTCTTGCTGGTCGTGAGATACTTACAAACTTCCTCTCGAGCATAATGATCCATGCAACAAGGCCCTTTGTTCTAAATGACTGGATACAGACTAAGATACAGGGATATGATGTCTCTGGCACAGTGGAGCACGTAGGTTGGTGGTCACCTACAGTCATAAGAGGTGATGATCGTGAAGCAATTCATATACCAAATCACAAATTTTCAGTGAATATCGTCAGGAATCTTACTCAGAGGACTCACTGGCGGATCAAGACTCATCTTGCCATCAGCCACTTGGATGTGAATAAGATCAACAACATTGTTGCGGATATGCGGAAGGTTTTGTCAAAACATCCTATGGTGGAACAGCAACGATTACATAGACGAGTTTTTCTGGATAACGTTGATCCAGAGAATCAGGCTCTTAAGATACTGATTTCTTGCTTTGTGAAGACTCCTCGTTTTGAAGAGTACCTCCGAGTGAAGGAAGTTATATTGCTGGATCTACTTCGAGTAATTAGCCATCATCGTGCTCGACTTGCTACACCTATTCGTACTGTGCAGAAAACATCTCGCGAGATTGATGCAGATGATGTACCATTTGCTGATTCCATTTTTTCTCGTAACCGGCCTAACCGCCAAGTCCTCCTCATCGAGCCTTCTTATAAGATCAGTAGTGATGATAAAGCCAAAGCTTCTGCTCGTTCAGTACAATCTGATGAAGAAAAAGACCAAAAGGTTGAAGCAACAATTACATCACGGACCGCTGATGACACAAATGGCAAGCCATCAACTCTCGTTGAAAAGGAAGTCGATAAGGCCTCATCAGCATCAAATGCGAATGGTGATTTAAAAGCAGCAACTTCACCATCAGATGGAAAATCACTAAAACAAGGATCTACCAGTCCAGTTAAAAGCAACTCTGAGAAAAACCAAGTTGCTGGAGACCCCCCGGGGTTGACATCAGATACCAACATTGAGAAGACAGATGCAGCGTCTTCTGCTTCACAGGCACAACAAGATACCGAAAGATCAATTTCTTCTCCACCTTCTTCAGTTGGAAGGCCCATGTTAGAAGACAACATTGTTCTTGGTGTTGCACTGGAAGGGTCAAAACTAACACTTCCAATTGAGGAGGACGAAACGACTCCACCTTCTCCCTCGGAATCAAAAGAGTTAGCTGCCTGCCGGAATGGTAATAGCTCAACCAACTCAAACAAAGATAAGACGGACGATAAGATGCCAGGAGCTCCAAGCACACAAAGTACATCAAATGAACAAAAAGAACGCGAAAGGTGATTATTTGAAGGTTGAGCAATGTGCAATAATGCGCTAAGGCTATTTTTTTAGAGCTTGCATTGTGCACACTGTAAATGTTTTTCTCATGAAATTTATTTTATTATATATAATTGTGGAGCATTAGTTGGCTTGTATTTAGCATTTGGTAATGATCAATGTAGACACAATAATACCACTAACTTTTAGCTTAAGGCTTGGTCTAACCATCCACCATCTTTAGCTTGCAATTCAATTGTACTGTTCTACCATAACTTTTGGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g076300.2.1SL2.50ch04:61215225..61222008704-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g076300.2SL2.50ch04:61214967..612229637,997-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g076300.2.1.1SL2.50ch04:61222816..61222963148-n/a
exonexon:Solyc04g076300.2.1.10SL2.50ch04:61218459..61218569111-n/a
exonexon:Solyc04g076300.2.1.11SL2.50ch04:61217815..61217982168-n/a
exonexon:Solyc04g076300.2.1.12SL2.50ch04:61217600..61217713114-n/a
exonexon:Solyc04g076300.2.1.13SL2.50ch04:61216662..6121671857-n/a
exonexon:Solyc04g076300.2.1.14SL2.50ch04:61214967..612160381,072-n/a
exonexon:Solyc04g076300.2.1.2SL2.50ch04:61221931..61222089159-n/a
exonexon:Solyc04g076300.2.1.3SL2.50ch04:61221749..6122180860-n/a
exonexon:Solyc04g076300.2.1.4SL2.50ch04:61220552..61220715164-1
exonexon:Solyc04g076300.2.1.5SL2.50ch04:61220056..61220179124-n/a
exonexon:Solyc04g076300.2.1.6SL2.50ch04:61219857..6121995498-1
exonexon:Solyc04g076300.2.1.7SL2.50ch04:61219652..61219765114-1
exonexon:Solyc04g076300.2.1.8SL2.50ch04:61219406..6121946661-n/a
exonexon:Solyc04g076300.2.1.9SL2.50ch04:61218765..61218914150-n/a
intronintron:Solyc04g076300.2.1.10SL2.50ch04:61218570..61218764n/a-n/a
intronintron:Solyc04g076300.2.1.11SL2.50ch04:61217983..61218458n/a-n/a
intronintron:Solyc04g076300.2.1.12SL2.50ch04:61217714..61217814n/a-n/a
intronintron:Solyc04g076300.2.1.13SL2.50ch04:61216719..61217599n/a-n/a
intronintron:Solyc04g076300.2.1.14SL2.50ch04:61216039..61216661n/a-n/a
intronintron:Solyc04g076300.2.1.2SL2.50ch04:61222090..61222815n/a-n/a
intronintron:Solyc04g076300.2.1.3SL2.50ch04:61221809..61221930n/a-n/a
intronintron:Solyc04g076300.2.1.4SL2.50ch04:61220716..61221748n/a-n/a
intronintron:Solyc04g076300.2.1.5SL2.50ch04:61220180..61220551n/a-n/a
intronintron:Solyc04g076300.2.1.6SL2.50ch04:61219955..61220055n/a-n/a
intronintron:Solyc04g076300.2.1.7SL2.50ch04:61219766..61219856n/a-n/a
intronintron:Solyc04g076300.2.1.8SL2.50ch04:61219467..61219651n/a-n/a
intronintron:Solyc04g076300.2.1.9SL2.50ch04:61218915..61219405n/a-n/a
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http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17803925%2Fdetails feature 17803925
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