Solanum lycopersicum mRNA Solyc04g076810.2.1
 mRNA details
|
| Name | Type |
Length
1,860
|
Organism |
|
Description
CBL-interacting protein kinase 17 (AHRD V1 **** C4P7W6_VITVI); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
|
|
Location(s)
SL2.50ch04:61680112..61685904
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0006468
- GO:0007165
- Length
- 5793
- Nb exon
- 14
- Sifter term
- GO:0004679
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc04g076810.2.1 CBL-interacting protein kinase 17 (AHRD V1 **** C4P7W6_VITVI); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
GTATAGCTTCCTTTTTCATTTTCAACTCCTTCACAGTTCATATTCCTTTTCCTCTCAACAATTCCCATCCCCTTTTGCTTTATTAGTTTAAAAATAGTACAGATTGGAGAAAAGCCAAAATCTTGCTCGTCAAGCCCTATATTTTTTCTTGAAATAGCAAAAAAAAATGGGTTGAGGTAACAGGAACTTGAAGAAGAAGAAAAAGGGTGTTGATTCGTGTTGTTGTTGAAGAAAAAGAAGCAAAAATGGTGGTAAGGAAAGTTGGTAAGTATGAAGTTGGAAGGACAATTGGAGAAGGAACATTTGCTAAGGTTAAATTTGCTCAGAATACTGAGACAGGTGAAAGTGTCGCCATGAAAGTCCTCGATCGAAGCACTATCATCAAGCACAAGATGGTTGACCAGATAAAGCAGGAGATATCCATAATGAAGCTTGTTAGACATCCATATGTAGTTCGATTACATGAGGTTATAGCAACTCGCACGAAGATCTATATTATCTTGGAATTTATCACAGGCGGGGAACTTTTTGATAAGATAGTCCACCATGGACGATTAAGTGAGGCCGAGTCTCGAAGATACTTTCAACAATTGATTGATGGAGTTGATTATTGTCACATCAAGGGAGTTTATCACAGAGACCTAAAGCCTGAAAATCTTCTGCTAGATTCCCAAGCAAATCTGAAAATATCAGATTTTGGACTTAGTGCATCACCTGGCGAAGGAGTCAACATTCTTAAGACTACATGTGGAACTCCCAACTATGTTGCACCAGAGGTTCTTAGTCACAAAGGTTATGATGGTGCTGTGGCTGATATCTGGTCCTGTGGTGTCATCCTTTATGTTCTGATGGCAGGTTATCTCCCTTTTGATGAGGTTGATCTCACTACACTGTACGCAAAGATTGACAAAGCAGATTTTTCCTGCCCATCTTGGTTTCCTGTTGGAGCAAAATCTCTGATACATCGAATTTTAGACCCAAATCCTCAAACTCGTATTCGGATTGAAGAGATCCGTAATGATGAGTGGTTTAAAAAAAATTATGATCCTGTCAAAGTCATGGAGTATGAAGATGTCAATTTAGATGATATTAATGCAGCTTTTGATGATACTGAGGAGGAAGCATCCAACGAGCAATGTGACAATGCGGATGCTGGGCCTCTGGCTTTAAATGCCTTTGACCTAATTATTCTCTCTCAAGGATTGAACTTATCCATATTGTTTGACCGTGGGCAGGACTCAATGAAGCATCATCAAACACGCTTCCTAACACAGAAACCAGCAAAAGTTGTTTTATCAAGTATGGAAGTTGTGGCCCAGTCCATGGGTTTCAAGACCCATATCCGCAATTTTAAGATGAGGGTAGAAGGTCTCTCCACAAACAAGACTTCACATTTCTCTGTAATACTGGAGGTTTTCGAAGTTGCTCCTACATTTTTCATGGTAGACGTTCAGAAAGCAGCCGGTGATGCTAGTGAATTCCTCAAGTTTTACAAGAACTTTTGTGGCAATCTTGAGGACATTATCTGGAGGCCACCGGATGAATCATGCAAATCAAAAGTTACAAAAGCAAGGAGTAGAAAGAGATGATATTTTAGCATTAGAGAGTCTGTGTGTACTTTGTGTTTGTATAAAAGATTACAGTTTCTTGAACCCAATAGGCAGTGAGTACACTCTTTTATAGTCGAGCCAAGTGAGGGGTAATGTTTCCGCGCTTTCCCCAGGTTTTATATCAGTTATATCAATGTGGTGATGACAGTTATCATCTTAGAGCAGAGAGTAAAACATAACAAATACTTGCTATTTCTAGAGAAGAGTGATTATATTTTTACCAGCTTCAGTGAAACATTTCCAATTTTCT
GTATAGCTTCCTTTTTCATTTTCAACTCCTTCACAGTTCATATTCCTTTTCCTCTCAACAATTCCCATCCCCTTTTGCTTTATTAGTTTAAAAATAGTACAGATTGGAGAAAAGCCAAAATCTTGCTCGTCAAGCCCTATATTTTTTCTTGAAATAGCAAAAAAAAATGGGTTGAGGTAACAGGAACTTGAAGAAGAAGAAAAAGGGTGTTGATTCGTGTTGTTGTTGAAGAAAAAGAAGCAAAAATGGTGGTAAGGAAAGTTGGTAAGTATGAAGTTGGAAGGACAATTGGAGAAGGAACATTTGCTAAGGTTAAATTTGCTCAGAATACTGAGACAGGTGAAAGTGTCGCCATGAAAGTCCTCGATCGAAGCACTATCATCAAGCACAAGATGGTTGACCAGATAAAGCAGGAGATATCCATAATGAAGCTTGTTAGACATCCATATGTAGTTCGATTACATGAGGTTATAGCAACTCGCACGAAGATCTATATTATCTTGGAATTTATCACAGGCGGGGAACTTTTTGATAAGATAGTCCACCATGGACGATTAAGTGAGGCCGAGTCTCGAAGATACTTTCAACAATTGATTGATGGAGTTGATTATTGTCACATCAAGGGAGTTTATCACAGAGACCTAAAGCCTGAAAATCTTCTGCTAGATTCCCAAGCAAATCTGAAAATATCAGATTTTGGACTTAGTGCATCACCTGGCGAAGGAGTCAACATTCTTAAGACTACATGTGGAACTCCCAACTATGTTGCACCAGAGGTTCTTAGTCACAAAGGTTATGATGGTGCTGTGGCTGATATCTGGTCCTGTGGTGTCATCCTTTATGTTCTGATGGCAGGTTATCTCCCTTTTGATGAGGTTGATCTCACTACACTGTACGCAAAGATTGACAAAGCAGATTTTTCCTGCCCATCTTGGTTTCCTGTTGGAGCAAAATCTCTGATACATCGAATTTTAGACCCAAATCCTCAAACTCGTATTCGGATTGAAGAGATCCGTAATGATGAGTGGTTTAAAAAAAATTATGATCCTGTCAAAGTCATGGAGTATGAAGATGTCAATTTAGATGATATTAATGCAGCTTTTGATGATACTGAGGAGGAAGCATCCAACGAGCAATGTGACAATGCGGATGCTGGGCCTCTGGCTTTAAATGCCTTTGACCTAATTATTCTCTCTCAAGGATTGAACTTATCCATATTGTTTGACCGTGGGCAGGACTCAATGAAGCATCATCAAACACGCTTCCTAACACAGAAACCAGCAAAAGTTGTTTTATCAAGTATGGAAGTTGTGGCCCAGTCCATGGGTTTCAAGACCCATATCCGCAATTTTAAGATGAGGGTAGAAGGTCTCTCCACAAACAAGACTTCACATTTCTCTGTAATACTGGAGGTTTTCGAAGTTGCTCCTACATTTTTCATGGTAGACGTTCAGAAAGCAGCCGGTGATGCTAGTGAATTCCTCAAGTTTTACAAGAACTTTTGTGGCAATCTTGAGGACATTATCTGGAGGCCACCGGATGAATCATGCAAATCAAAAGTTACAAAAGCAAGGAGTAGAAAGAGATGATATTTTAGCATTAGAGAGTCTGTGTGTACTTTGTGTTTGTATAAAAGATTACAGTTTCTTGAACCCAATAGGCAGTGAGTACACTCTTTTATAGTCGAGCCAAGTGAGGGGTAATGTTTCCGCGCTTTCCCCAGGTTTTATATCAGTTATATCAATGTGGTGATGACAGTTATCATCTTAGAGCAGAGAGTAAAACATAACAAATACTTGCTATTTCTAGAGAAGAGTGATTATATTTTTACCAGCTTCAGTGAAACATTTCCAATTTTCT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc04g076810.2.1 | SL2.50ch04:61680382..61685659 | 448 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc04g076810.2 | SL2.50ch04:61680112..61685904 | 5,793 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc04g076810.2.1.1 | SL2.50ch04:61685501..61685904 | 404 | - | n/a |
| exon | exon:Solyc04g076810.2.1.10 | SL2.50ch04:61681307..61681426 | 120 | - | n/a |
| exon | exon:Solyc04g076810.2.1.11 | SL2.50ch04:61680941..61681060 | 120 | - | n/a |
| exon | exon:Solyc04g076810.2.1.12 | SL2.50ch04:61680730..61680786 | 57 | - | n/a |
| exon | exon:Solyc04g076810.2.1.13 | SL2.50ch04:61680577..61680651 | 75 | - | n/a |
| exon | exon:Solyc04g076810.2.1.14 | SL2.50ch04:61680112..61680484 | 373 | - | n/a |
| exon | exon:Solyc04g076810.2.1.2 | SL2.50ch04:61684685..61684747 | 63 | - | n/a |
| exon | exon:Solyc04g076810.2.1.3 | SL2.50ch04:61684480..61684551 | 72 | - | n/a |
| exon | exon:Solyc04g076810.2.1.4 | SL2.50ch04:61684265..61684372 | 108 | - | n/a |
| exon | exon:Solyc04g076810.2.1.5 | SL2.50ch04:61684100..61684174 | 75 | - | n/a |
| exon | exon:Solyc04g076810.2.1.6 | SL2.50ch04:61683943..61683996 | 54 | - | n/a |
| exon | exon:Solyc04g076810.2.1.7 | SL2.50ch04:61683676..61683801 | 126 | - | n/a |
| exon | exon:Solyc04g076810.2.1.8 | SL2.50ch04:61683440..61683529 | 90 | - | n/a |
| exon | exon:Solyc04g076810.2.1.9 | SL2.50ch04:61681883..61682005 | 123 | - | n/a |
| intron | intron:Solyc04g076810.2.1.10 | SL2.50ch04:61681427..61681882 | n/a | - | n/a |
| intron | intron:Solyc04g076810.2.1.11 | SL2.50ch04:61681061..61681306 | n/a | - | n/a |
| intron | intron:Solyc04g076810.2.1.12 | SL2.50ch04:61680787..61680940 | n/a | - | n/a |
| intron | intron:Solyc04g076810.2.1.13 | SL2.50ch04:61680652..61680729 | n/a | - | n/a |
| intron | intron:Solyc04g076810.2.1.14 | SL2.50ch04:61680485..61680576 | n/a | - | n/a |
| intron | intron:Solyc04g076810.2.1.2 | SL2.50ch04:61684748..61685500 | n/a | - | n/a |
| intron | intron:Solyc04g076810.2.1.3 | SL2.50ch04:61684552..61684684 | n/a | - | n/a |
| intron | intron:Solyc04g076810.2.1.4 | SL2.50ch04:61684373..61684479 | n/a | - | n/a |
| intron | intron:Solyc04g076810.2.1.5 | SL2.50ch04:61684175..61684264 | n/a | - | n/a |
| intron | intron:Solyc04g076810.2.1.6 | SL2.50ch04:61683997..61684099 | n/a | - | n/a |
| intron | intron:Solyc04g076810.2.1.7 | SL2.50ch04:61683802..61683942 | n/a | - | n/a |
| intron | intron:Solyc04g076810.2.1.8 | SL2.50ch04:61683530..61683675 | n/a | - | n/a |
| intron | intron:Solyc04g076810.2.1.9 | SL2.50ch04:61682006..61683439 | n/a | - | n/a |
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