Solanum lycopersicum mRNA Solyc04g077260.2.1
mRNA details
|
| Name | Type |
Length
1,005
|
Organism |
|
Description
MYB transcription factor (AHRD V1 *-** Q9T066_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factor
|
|
Location(s)
SL2.50ch04:62235761..62237526
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0003677
- GO:0045449
- Length
- 1766
- Sifter term
- GO:0003700
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc04g077260.2.1 MYB transcription factor (AHRD V1 *-** Q9T066_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factor
ATGGGGAGAGCTCCTTGTTGTGACAAAAATAATGTCAAGAGAGGGCCATGGTCACCTGAAGAAGATGCTAAGTTGAAGTCATATATTGAGCAAAATGGAACTGGGGGAAACTGGATTGCTTTGCCTCAAAAAATTGGTCTTAAGAGATGTGGAAAGAGTTGTAGGCTTAGATGGTTAAATTATTTGCGGCCAAACATCAAGCATGGAGGATTTTCAGAAGAAGAAGATAGGATCATTTGCAGCCTCTACATAAGTATTGGAAGCAGGTGGTCAATAATTGCAGCTCAACTCCCTGGAAGAACTGATAACGACATAAAAAACTACTGGAATACTAAGCTAAAGAAGAAGTTATTTGGGAAACAACGTCAAAAGCAAGGATCAAGAAAAGGAAAAGAAATCAACTCCATCTCATCAATTTCTAATAGCATCAACAACATGAACCAAAACCCTTGTTGGCCTGAGCCTCTCATCATGCAACAACCAATACAATTCTCAAATAATGACCATACATCCATCAGAAAGTTATTAATCAAGCTTGGAGGTAAATTCTCAGAAAATGACCAATTGACAAATGTTGTGTCACCAAATTCTCAACATCCTATCGATAATTCATCGATGCAACTAATGTATCAAAATCATATCAATTTAATCTCTTCGTCTCCAATAGACAATGTCTTCAACAACATGAGTACCGCGCCTCTATACAACATGGATGGGGAAGCTAGCAATTTTACAGCTGAATTTGAGCATATGATAAATAATCATCAACAAAAATTAGATGGTCTTGAATTTTTATACGAGGATAATGTATTTATCGATAAATCAGCGTCTACTTCTGGAGGAAATTTAGACTGGGAATCGATGAATCCTTATGTGCTTCCTTTTCCTCCTATTGTTGATGGAGGTAATTTTCAACAAGGTGTTATACTTCAAGAAGGTACACTTGATGATGAACTAAGATACCCCAGGGAACAATAATAATATTATTGTACGTACATTTTATTA
ATGGGGAGAGCTCCTTGTTGTGACAAAAATAATGTCAAGAGAGGGCCATGGTCACCTGAAGAAGATGCTAAGTTGAAGTCATATATTGAGCAAAATGGAACTGGGGGAAACTGGATTGCTTTGCCTCAAAAAATTGGTCTTAAGAGATGTGGAAAGAGTTGTAGGCTTAGATGGTTAAATTATTTGCGGCCAAACATCAAGCATGGAGGATTTTCAGAAGAAGAAGATAGGATCATTTGCAGCCTCTACATAAGTATTGGAAGCAGGTGGTCAATAATTGCAGCTCAACTCCCTGGAAGAACTGATAACGACATAAAAAACTACTGGAATACTAAGCTAAAGAAGAAGTTATTTGGGAAACAACGTCAAAAGCAAGGATCAAGAAAAGGAAAAGAAATCAACTCCATCTCATCAATTTCTAATAGCATCAACAACATGAACCAAAACCCTTGTTGGCCTGAGCCTCTCATCATGCAACAACCAATACAATTCTCAAATAATGACCATACATCCATCAGAAAGTTATTAATCAAGCTTGGAGGTAAATTCTCAGAAAATGACCAATTGACAAATGTTGTGTCACCAAATTCTCAACATCCTATCGATAATTCATCGATGCAACTAATGTATCAAAATCATATCAATTTAATCTCTTCGTCTCCAATAGACAATGTCTTCAACAACATGAGTACCGCGCCTCTATACAACATGGATGGGGAAGCTAGCAATTTTACAGCTGAATTTGAGCATATGATAAATAATCATCAACAAAAATTAGATGGTCTTGAATTTTTATACGAGGATAATGTATTTATCGATAAATCAGCGTCTACTTCTGGAGGAAATTTAGACTGGGAATCGATGAATCCTTATGTGCTTCCTTTTCCTCCTATTGTTGATGGAGGTAATTTTCAACAAGGTGTTATACTTCAAGAAGGTACACTTGATGATGAACTAAGATACCCCAGGGAACAATAATAATATTATTGTACGTACATTTTATTA
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc04g077260.2.1 | SL2.50ch04:62235760..62237499 | 326 | + | n/a |
Add items to a list:
| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc04g077260.2 | SL2.50ch04:62235761..62237526 | 1,766 | + | n/a |
Add items to a list:
| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc04g077260.2.1.1 | SL2.50ch04:62235761..62235896 | 136 | + | n/a |
| exon | exon:Solyc04g077260.2.1.2 | SL2.50ch04:62236259..62236388 | 130 | + | 2 |
| exon | exon:Solyc04g077260.2.1.3 | SL2.50ch04:62236788..62237526 | 739 | + | 1 |
| intron | intron:Solyc04g077260.2.1.1 | SL2.50ch04:62235897..62236258 | n/a | + | n/a |
| intron | intron:Solyc04g077260.2.1.2 | SL2.50ch04:62236389..62236787 | n/a | + | n/a |
Add items to a list:
| Related views |
| User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
mRNA details
mRNA details

