Solanum lycopersicum mRNA Solyc04g077480.2.1

mRNA details  
Name
Solyc04g077480.2.1
Type
mRNA
Length
1,675
Organism
Solanum lycopersicum
Description
Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch04:62396553..62400329
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3777
Nb exon
8
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g077480.2.1 Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

GTTGTGTGTCTATAGGATGCTGCATTGAGAGATTTCTTTTGCTTTAAAGCTGCCAAGTTATTTTGTTCTTTGTTGAGTCTTGCAAGATATTACTACTTCTTTTTGGTCAAACCCCACTTTACCTTTTCTTTTTTATTTTTCTTGCACAGAGTTCCTTTCTGTCAAATAACAATCAAGTTCTTGGCTTTGGTTAAAAACATTGCATTGGTGTTGTTGCCTTTTTGAAGGTTGCACGAATTGAGTTCAGAACTAAATTTGTGGATCCTGAGCTATCTGCCTTTGTATTTTCTTGATAATGGGTACTAAGGAAAATGGTTCTTTCAATTGCCCTTCTACTGGGATGAATAGAGCAGATTCAATGCCTAATGTTGACCCTTTTAGTGGTTCTGGTTGGGATCCACTTCTTTCACTGAATCAGAAGGGGGGATTTAAAGGATCTTCAGTTGTTGGTCACAATGAGTTTGTCAATTTGCCCTATCAATCATCTCAGTTTGTTCACTATCCATCTGATTCAAATCTAGCTGAAATGGTCCCAAAGATTCCAGCTTTTGGAAATGAAAGTTACTCAGAATTGGTCAATACTTTTCCTTTACAAGAACAGCTTAGAGGGGCAAATTGTTATGCTAACTATGTTAAGAACAGAGGGATTTCCACTGAAGGAGAGTGCCAAATTTCTGGTGAAGGTGCTGTGGAGGTTTCACCTAATGGGAAGAGGAAAATATCAGAAAACCATTCTTTATCCAATGCCAACAAGAATGTTGAAGGAGAGCTGCAGAAGGCTCCATCAAGAGATAGTTCAGACTGTTCAAAAGAACAAGATGGTGGAAAAAGACACAAAACAGACCAAAACGTTAGCTCTAACTTAAGGAACAAGCAAGCAGGGAAACAAGTTAAGGATGACTCTGATGGTGGAGAACCTCCTAAGGATAATTATGTTCACGTTAGGGCTAAAAGAGGGCAAGCCACAAACAGCCACAGCCTTGCAGAAAGGGTGAGGAGAGAAAGGATCAGTGAGAGGATGAGATTGCTTCAAGAATTAGTTCCGGGCTGCAATAAGATAACTGGAAAAGCTGTGATGCTTGATGAGATTATCAACTACGTGCAATCGCTGCAACAGCAAGTTGAGTTCCTGTCAATGAAACTTGCTACTGTAAATCCGGAACTGAACTTCGATATTGATCGTATTTTATCAAAAGAGATGCTCCATCAGCAAACTAGCAATGCAGCTCTTCTTGGTCTTGGTCCAGGGCTAAGTTCCTCTCTTCCTTTTCCTGGAATTTCTCATGGAAGTTTTGCTGGTATCCCCGCAACGACACCACCCTTCCATCCCTTGCCTCAGAATGTATGGGACAATGAGCTTCAAAGCCTTCTTCAAATGGGATTTGATTCAACTTCATCTATGAACAATATGGGACCAAATGGACGGTCAAAGTTGGATCTGTAGATTCTTTTTCGGGACAGATGTTTGCGTTGTTTTACTATGATCAGACGATTCTATTTACCCCAATTGACTGCAAAATGTGTTTTGCATACTTGGACAGAAGATATAGTGAAAATTTACTTTTACTTTTTTCTGGAGTTGTATAGGATATTAGCTCCTAACTCATTTTGTGTTCTTCGAGTTTTAGCAGAAGAGATTATTTTAGATTGGTAAGAAATGAACTGTACATTGAAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g077480.2.1SL2.50ch04:62396783..62400034383-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g077480.2SL2.50ch04:62396553..624003293,777-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g077480.2.1.1SL2.50ch04:62399576..62400329754-n/a
exonexon:Solyc04g077480.2.1.2SL2.50ch04:62398751..62398987237-n/a
exonexon:Solyc04g077480.2.1.3SL2.50ch04:62398576..6239864166-n/a
exonexon:Solyc04g077480.2.1.4SL2.50ch04:62398424..6239849269-n/a
exonexon:Solyc04g077480.2.1.5SL2.50ch04:62397888..6239795972-n/a
exonexon:Solyc04g077480.2.1.6SL2.50ch04:62397669..62397809141-n/a
exonexon:Solyc04g077480.2.1.7SL2.50ch04:62396907..6239698882-2
exonexon:Solyc04g077480.2.1.8SL2.50ch04:62396553..62396806254-n/a
intronintron:Solyc04g077480.2.1.2SL2.50ch04:62398988..62399575n/a-n/a
intronintron:Solyc04g077480.2.1.3SL2.50ch04:62398642..62398750n/a-n/a
intronintron:Solyc04g077480.2.1.4SL2.50ch04:62398493..62398575n/a-n/a
intronintron:Solyc04g077480.2.1.5SL2.50ch04:62397960..62398423n/a-n/a
intronintron:Solyc04g077480.2.1.6SL2.50ch04:62397810..62397887n/a-n/a
intronintron:Solyc04g077480.2.1.7SL2.50ch04:62396989..62397668n/a-n/a
intronintron:Solyc04g077480.2.1.8SL2.50ch04:62396807..62396906n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17805545%2Fdetails feature 17805545
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