Solanum lycopersicum mRNA Solyc04g078690.2.1

mRNA details  
Name
Solyc04g078690.2.1
Type
mRNA
Length
1,400
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-*- B6TXR4_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH
Location(s)
SL2.50ch04:63385143..63389952
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4810
Nb exon
6
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g078690.2.1 BHLH transcription factor (AHRD V1 *-*- B6TXR4_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH

CCAAATAAATCACGCAATTAAGGCGGGAGAAGATGAACTAATCACCCATCTCTACATAAAGTGTGTCCTCCGTAGTCCAACTTTTGTTGAAACTCAAAACTCAAAAACCCAAAGCAACACGCATACGATTCTTCTGAGTTTTCTGCAGATGATTGTTTTGTGATGGTGGTAATTGTCAATGGCGGATCCGTACAGAACGAACCCTCACGCTTCTTCATCTCTCGAATCCGAAGATATGTCTTCCTTTTTTCTTAATTTTCTTCAAGGAACGCCCGCTTCCTCTTCTGCGACTGCTGCGGCTGGTTTTTATAACCGATCGGGACCGGCGCCGGTGGCTGAGTCATCTTCTAGCCTCAATTTCTCCGATCCCGGCCGATTTTATGCTGCCGAGTTCAAGGAAGGCGTTGAGAATGTGTTTGCTTCTGCTGGCCTCGGGGAATGTGACGGTATGAATTCAGCTAATAGGAGAGAGTTTTTGGAAGATGATAAGGTTGATAACTTCGGTTTTAGTAGCGAGGAATGTGATGGACTTGACATGCCATCTGATCCGACTCATCCACGTTCTTCAAAGAGGAGTAGATCTGCTGAAGTTCATAATTTGTCCGAGAAGAGGAGGAGGAGTAGGATCAATGAGAAACTGAAAGCATTGCAGAACCTAATTCCGAATTCTAACAAAACTGACAAGGCATCTATGCTTGATGAAGCCATTGAATATCTGAAGCAACTTCAACTGCAAGTTCAGATTCTTACCTTGAGGAATGGGTTGAGTTTATACCCAGGATATGTTCCCGGGTCTTTGCAGTCGGTGCAACTTCCATCTGGTAATGAATTTGATGGGAGAAGTTTTATGCTGAGTGCAAATGGAGGAGCTACACTTCCTGTGAATCGAGAAATGCCACAAACTGCATTTGAAATTTCCAATCAGAATCCGTCAGGCAAACCAACAATAACCTCACATAACACAGAAAACGCTGTAGCTTTAGAAACTACAATTCAGAATCATTATGGACTTCTTAACCATTTAGCATCTTCTAAGGACATGTGCCGAGACAATACACTATCAAGATTGCATTTAGATATGAGTTGCTCTGGAAACAATTCATCATCAGGAGTGTCGTCTTAACCAAAATTTCACAGGATCAAATATTCGAGGAGTTGGTGTAGATGGAATTAACTACTGATACTGTGAAACTCCAATTGTTTGTACATCTCATAAGTCAAATATTTGCCTCATGGTCCTGAGATACACTGATCCTTGATTGTTATGCTCAATGAGCACGAACAGAACTATGCTTTTGTAACTGTTGAAACTTGGATTTGACAAAATAACTAGTGTTGAAAAAATAACTGTTCAAACTTTTAGGTACTTTTAGTGTATGACGTTTCGAGTTGTACTTGAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g078690.2.1SL2.50ch04:63385320..63389675315+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g078690.2SL2.50ch04:63385143..633899524,810+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g078690.2.1.1SL2.50ch04:63385143..63385659517+n/a
exonexon:Solyc04g078690.2.1.2SL2.50ch04:63385797..6338588993+n/a
exonexon:Solyc04g078690.2.1.3SL2.50ch04:63385980..6338604566+n/a
exonexon:Solyc04g078690.2.1.4SL2.50ch04:63386132..6338619766+n/a
exonexon:Solyc04g078690.2.1.5SL2.50ch04:63389224..63389517294+n/a
exonexon:Solyc04g078690.2.1.6SL2.50ch04:63389589..63389952364+n/a
intronintron:Solyc04g078690.2.1.1SL2.50ch04:63385660..63385796n/a+n/a
intronintron:Solyc04g078690.2.1.2SL2.50ch04:63385890..63385979n/a+n/a
intronintron:Solyc04g078690.2.1.3SL2.50ch04:63386046..63386131n/a+n/a
intronintron:Solyc04g078690.2.1.4SL2.50ch04:63386198..63389223n/a+n/a
intronintron:Solyc04g078690.2.1.5SL2.50ch04:63389518..63389588n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17806743%2Fdetails feature 17806743
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