Notice: Due to a wide-spread power outage in the area, SGN was unavailable early on Sunday. We apologize for the inconvenience.

Solanum lycopersicum mRNA Solyc04g079400.2.1

mRNA details  
Name
Solyc04g079400.2.1
Type
mRNA
Length
2,485
Organism
Solanum lycopersicum
Description
Protein serine/threonine kinase (AHRD V1 *-** D3BP85_POLPA); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
Location(s)
SL2.50ch04:63910315..63915179
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006468
Length
4865
Nb exon
11
Sifter term
GO:0016301
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g079400.2.1 Protein serine/threonine kinase (AHRD V1 *-** D3BP85_POLPA); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

AAGAAATCGTGTTTCTGACTTGTAACAACAAATTATAATCATCCTTCTTTTTCACTTAAGAAACATTCAAACATTGACGAAAAGTTTTCTCTTTCAATGCATTAAAATCCCATTACTCATTCAGTTCTGTGTAATCTCATTTTCTTTTCTTTTTTTCTCTCTGTATTTGTTTGCCATGAAAAATGCCGTCTTTATGGAAAGCATTTTCACTATCTTCAAGCTCTCAACACTCTTCTTCTTCTTCCAGTAGCACTTCTTCTCCGGCCGATTCACCGAATACCCGGCGGATTTACGGCGGTGGAAGGAAGCTTACTAGGCAGAGGAAGTTGAGACATGTTAGTGATGATGATCTTGGTTTACGGAGACCTAATATTCAGGCACTGATTATTGATGAACGTTCAAAGTCTTTGCCGGGTTCTCCTGATTCTTACGCTGATTTCGGGTCGGGTTCTAGGTTGTCTCACCAGCTCCGTCACTGTTCTAATTCCTCTGCTGTGCCACTGCCGTTGCCGCTCCCGGAGCTCAATTCTCTGCCTAAACAGAACTCGGTTCACTCTAATTTGCCGGTTAGAGTTGACAGGGAGCTTTTAAGTCCTCCTCTTGCCAGGGAAACTTTTGATCGAACTCCAGCTGAGGTGAAAAGTTCTCAGCATCCAAGGTCATCTACTCCAACTTATCGGCGTAGGGGTTTCCCTCAGGATCTGAACGCCGAGGGTGTTGAATTCAGGTTGAACGTTCCTGCTAGAAGTGCCCCAAGTAGTGGTTTTACAAGCCCTGTCCGAAGCCCAAAAAGGTTTAGCACGCAGGACCTTTTTCATCATCCATTGCATCAGGCCTCATCATCACCTTCAGAGGCTTACGCTTTCCAACTTTCACCCACAAGGGTTATAAATAGCGCTGATCATTCTCCAGTGAGTAGCCCAATTTTACCAAGTTCAGCTAACAGAATCAGGAACAGCAAAAGTGTTGCTTTGCATTCACATCATAAATCTCTTCCGGAAAGTTCTCTAGGTTGGAATGAAGCTAACAACAACAATGTGCATCCACTACCCCTTCCACCAGGAGTTCCACGACAACCAGAATTATGTACCATGCACAGCAATATGGATAAACCTTGTGTATCACCAACAAAGGGTCAATGGCTAAAGGGGAAGCTTTTAGGTCGTGGTACATATGGAAGTGTATATGAAGCTACCAACCGTGAAACCGGTGCTTTATGTGCAATGAAAGAAGTTGATCTTACTCCTGATGATCCTAAATCTGCTGAATGTATAAAGCAGTTAGAACAGGAAATAAGAGTTCTCAGGCAGTTGAAGCACCAAAATATTGTTCAATATTATGGCAGTGAAATAATGGAAGACCGCTTTTGCATATATTTGGAATATGTGCACCCCGGTTCAATTAATAAGTACGTTCGGGAACATTGCGGAGCTATGACAGAGTCAATAGTTCGAAACTTTACTAGGCATATTGTATCAGGGTTGGCTTACTTGCATAGCACTAAAACAATACACAGGGACATTAAGGGAGCAAATTTGCTTGTAGATGCATCTGGTGTTGTCAAGCTTGCAGATTTTGGGTTAGCAAAACATCTTTCAAGCTGTGCGACTGATCTTTCTCTGAAAGGGAGCCCTCACTGGATGGCTCCAGAGGTAATGCAGGCTGTTTTGCGCAAAGATGCCAATCCAGAGCTTGCCTTAGCTGTTGATATATGGAGCCTGGGCTGTACTGTTATTGAGATGTTTACTGGACAGCCCCCTTGGGGCGAACTTAGTTGGGTGCAAGCAATGTTCGGTGTCTTGAACAAATCACCACCTATACCAGAAAAATTATCATCAGAAGGAAAGGATTTCCTTCAGTGCTGCTTTCGGAGGAAACCTGCAGATAGGCCATCAGCTATGACGCTACTTGAACATGCTTTTTTACGTAGTACTAGTTCCCTTGAGCATAGTATCAATGTTGCTGGTTGCTCAGAGGATTCTCCGGGGAAGAAATTCCATGATACCCTGAGTCCTAAGAACCCAATCAACCCCAAAAAGGAACAAAAACCACTGTTACCAGGAACATCTGGCAGGCAAGCAAAATCACCATGTAGCAGTGAAACTTGCCGGCAAACTCAACCTGAAACCTGTGAATATGGAGCAACTTCTCACCATTCTCCACGTTCTGCACTTGAAGTCTTTCCCTGTATTACTTCAATGGAGCTGAACTCGAGTTCACGTGCAGCCAGCCCCTCAAGCGTTCCTAGTAGCTTTCGCCTGGGACCTGAAAACAGAAGTCCTTATAGAATCATAGGGAAGGAAATTCCAAACCTCTGTATAAGATCATAAATGAATGGAGAGGAGGGAAATTCATGTACAGATCAGGAGAATTAGATACAGAAAACTTCAGTTGGATGATTAGTCAAAATGTTGCCATATGTAATATTCATGTTGTATTTGAAGGCATACATATCTTTATAACATATTCATGAAGAATTGAAGAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g079400.2.1SL2.50ch04:63910469..63914997716-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g079400.2SL2.50ch04:63910315..639151794,865-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g079400.2.1.1SL2.50ch04:63914573..63915179607-1
exonexon:Solyc04g079400.2.1.10SL2.50ch04:63910868..6391096598-1
exonexon:Solyc04g079400.2.1.11SL2.50ch04:63910315..63910701387-n/a
exonexon:Solyc04g079400.2.1.2SL2.50ch04:63913266..63913859594-1
exonexon:Solyc04g079400.2.1.3SL2.50ch04:63913100..6391318788-n/a
exonexon:Solyc04g079400.2.1.4SL2.50ch04:63912528..6391259063-n/a
exonexon:Solyc04g079400.2.1.5SL2.50ch04:63912284..63912447164-1
exonexon:Solyc04g079400.2.1.6SL2.50ch04:63912010..6391208576-n/a
exonexon:Solyc04g079400.2.1.7SL2.50ch04:63911774..6391183360-n/a
exonexon:Solyc04g079400.2.1.8SL2.50ch04:63911540..63911665126-n/a
exonexon:Solyc04g079400.2.1.9SL2.50ch04:63911093..63911314222-n/a
intronintron:Solyc04g079400.2.1.10SL2.50ch04:63910966..63911092n/a-n/a
intronintron:Solyc04g079400.2.1.11SL2.50ch04:63910702..63910867n/a-n/a
intronintron:Solyc04g079400.2.1.2SL2.50ch04:63913860..63914572n/a-n/a
intronintron:Solyc04g079400.2.1.3SL2.50ch04:63913188..63913265n/a-n/a
intronintron:Solyc04g079400.2.1.4SL2.50ch04:63912591..63913099n/a-n/a
intronintron:Solyc04g079400.2.1.5SL2.50ch04:63912448..63912527n/a-n/a
intronintron:Solyc04g079400.2.1.6SL2.50ch04:63912086..63912283n/a-n/a
intronintron:Solyc04g079400.2.1.7SL2.50ch04:63911834..63912009n/a-n/a
intronintron:Solyc04g079400.2.1.8SL2.50ch04:63911666..63911773n/a-n/a
intronintron:Solyc04g079400.2.1.9SL2.50ch04:63911315..63911539n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17807604%2Fdetails feature 17807604
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)