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Solanum lycopersicum mRNA Solyc04g079420.2.1

mRNA details  
Name
Solyc04g079420.2.1
Type
mRNA
Length
2,698
Organism
Solanum lycopersicum
Description
Nbs-lrr, resistance protein
Location(s)
SL2.50ch04:63928054..63931589
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006952
  • GO:0005515
  • GO:0006915
Length
3536
Nb exon
6
Sifter term
GO:0016301
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g079420.2.1 Nbs-lrr, resistance protein

CAAACAGAATGTGGAAAACAGTTTGAAGTCTCCAAACATGGCGGTGACGGACTTTTTCGCCGGCGAGATTACCACCGAACTCATAAAATACCTGCTGTTGATAGTTAAAAAATCCACTTTATGCCGTTCAAGCGCAGAGAATCTCATTGACAATATCAATGGTCTCCTTCCAATCATCCAAGAAATCAAACAAACCGGTGTTGAACTTCCACAGATACGGCAAACTCAGCTCGACGATTTCTCCAAACTTCTCCGAGATGGCTACGAACTCGCCGGAAAAGTTCTCCACTCCGGCCGTTGGAACATGTACAGGAACCTACAGTTGGCTAGGAAAATGGAGAGGTTAGAGAAAAGAGTAGCGAGGTTCATGCAAGTGACAATGCAAGCTCATGTACTAGCTGATGTTCATCATGTTAGGTTTAATATGGAGCAGAGATTTGATGTGCTTGAGCATAGGCTTAAAGCTATAAAAATCGGAGTTGATGATAGAAGTGGTGGAGGAGGAGGGTGTTTAGGGGAAGCTGTGAAAAGAATGGAAGAAGATGAGAAATGGTTTGAGGATAGTTTTGTAAATTTAGGTGCTGGGATTGAATTGGGGAAGAGGAAGGTGAAGGAGATGCTGATGGGTGAACAAGATAGGGGTGTGTTTGAGATTTGTGGAATTGGGGGTAGTGGCAAAACTACCTTGGCTAAAGAGATTTGTAAAGATGATCAAGTTAAAAGTTATTTCAAGGACAAGATTTTCTTTTTCACTGTCTCTCAATCTCCAAATGTGGAGCAATTAAGGAAAATGATTTGGGAAAAGATATCAGGGTGTAATCTCCATGGTTATGGATACGGGGAGATGTTTCCCCAGTGGAACCTACAGTACCAATGGAATACGAAATCTGCATCCCCGGTACTCTTGATTCTTGATGATGTGTGGTCTGCATCTGTTCTAGAGCCACTAGTTTTCAAGATCCCCGGATGCAAGATCCTAGTTGTATCGCGCATCAAGTTTCCTCCATCGATCATTGACTGTGTTTATGATTTAGAGCTGTTAAGGGAAGATGAAGCTATGTCCTTATTTTGCCATTTTGCTTTTGGACACAATTCCTTTCCGCGTGGTTTCAGCCAAAAGCTTGTCAAAGAGATTGTGGATGAATGTGAAGGGCTTCCTTTGGCTCTTAAGGTCATTGGATCTTCATTGAAGGGAAAACCTGAGATGTTATGGACAAGTGCAAAAAATAGATTATCACGATGCCAACCTGTCTGTGAGTCTCATGAACTGCAGTTGCTTGAGCGAATGAAATTGAGTATTGACTGTTTGCCTGAGAAGGTGCGAGAGTGTTTCCTGGACTTGGGTGCTTTCCCAGAAGACAAAAGGATTCCTCTCGATGTTCTAATTAACATGTGGGTGGAGCTACATGATATTGATGAGGAGGAGGCTTTTCACATTCTTGTTGAACTTTCAGACAAAAATCTCCTAAATCTAGTCAAAGATGCACGAGCTGGAGACATGTATACAAGTTACTATGAGATATCGGTGTTTCAGCATGATGTATTACGAGACCTAGCAATTCATATGAGCAACCGTGATGATATAAATAAGAGAAAGCGATTGGTTATGCCGCGAAGAGACACAAGCTTCCCAAGAGAATGGGAAAGAAATGTGGACGAACCTTTCCATGCACGAGTCATCTCTGTGCATACAGATGAAATGAGAGAAATGGACTGGTTCAGAATGGATTGCCCGAAAGTTGAAGTACTGATTCTCAACTTTGCCTCATCTGAATACTTCTTACCTCCTTTTCTGGAGAACATGCCAAAGCTAAGGGCATTGATAATCATAAACTATAGTGCTGGCAATGCCGTTCTTCATAACATGTCTGTATTCAGTCATTTAACCAACTTGAGAAGCCTTTGGTTCGAGAAGATATCCATCACTCACTTATCTGACTCCACAAATCCTCTCAATAACCTGCGAAAGATATCTCTAGTGCTTTGTGACATGAAAAACAGCTTAGATGAGTCAGATGTAGACCTCCCTGGTTTGTTCCCACAGCTCTCGGAGTTCACAATGGATCACTGCATCAACTTCAACAAGCTACCATCAAGCATTTGCCGGTTGCATAAGCTCAACAGCCTTAGCATCACTAATTGTGATAGTCTTTATGAACTTCCATCTGATTTAGGTGAATTACAAACTCTACAAGTTCTAAGGATATATGCCTGCCCACATCTGAAAAGGCTTCCCCCGGGAATTGGTCATTTGGTAAAGCTGAAGTACCTTGACATTTCACAATGTGTTGGTTTGAGATGTCTCCCTGAAGCAATTGGTTGCTGTAGAAACTTAGAGAAGATCGATATGAGGGAGTGCCCTCAAATCGACAGTTTGCCTAGCGCTCTATCCTTTCTTGAATCATTACGCTGTGTTATCTGTGACGATGAAATTTTTTGTCAATGGAAAGACGTTGAGAAGGCTGTACCAGGTCTCTGTGTACAGGTTGCCGAGGAGTGCCATACTCTTGACTGGCTATCTCAGTAATCAAAGTTTTCAATTCCCTCGCGTTGGGCTTCTTTTGTGTAAATATAGCAAGGCTCAGTTAATTTTCCAGTTCTGTATTTTCCCCTTTACATGGGGTTCCTTATATCTCTTGTAAATAATATATATAGCTACATGTAAATATATAGATGGATTACATCTCAATAGCTAATC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g079420.2.1SL2.50ch04:63928090..63931418830+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g079420.2SL2.50ch04:63928054..639315893,536+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g079420.2.1.1SL2.50ch04:63928054..63928365312+n/a
exonexon:Solyc04g079420.2.1.2SL2.50ch04:63928479..63928888410+n/a
exonexon:Solyc04g079420.2.1.3SL2.50ch04:63929318..63929727410+1
exonexon:Solyc04g079420.2.1.4SL2.50ch04:63929826..63930181356+2
exonexon:Solyc04g079420.2.1.5SL2.50ch04:63930295..63930500206+n/a
exonexon:Solyc04g079420.2.1.6SL2.50ch04:63930586..639315891,004+1
intronintron:Solyc04g079420.2.1.1SL2.50ch04:63928366..63928478n/a+n/a
intronintron:Solyc04g079420.2.1.2SL2.50ch04:63928889..63929317n/a+n/a
intronintron:Solyc04g079420.2.1.3SL2.50ch04:63929728..63929825n/a+n/a
intronintron:Solyc04g079420.2.1.4SL2.50ch04:63930182..63930294n/a+n/a
intronintron:Solyc04g079420.2.1.5SL2.50ch04:63930501..63930585n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17807636%2Fdetails feature 17807636
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