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Solanum lycopersicum mRNA Solyc04g080820.2.1

mRNA details  
Name
Solyc04g080820.2.1
Type
mRNA
Length
2,072
Organism
Solanum lycopersicum
Description
Cytokinin oxidase/dehydrogenase (AHRD V1 **** C3VPM7_SOLTU); contains Interpro domain(s) IPR015345 Cytokinin dehydrogenase 1, FAD and cytokinin binding
Location(s)
SL2.50ch04:64891808..64897323
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0055114
  • GO:0050660
Length
5516
Nb exon
5
Sifter term
GO:0019139
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g080820.2.1 Cytokinin oxidase/dehydrogenase (AHRD V1 **** C3VPM7_SOLTU); contains Interpro domain(s) IPR015345 Cytokinin dehydrogenase 1, FAD and cytokinin binding

AGAAAATTTATTAACATTTCTTACACCTTCAAATATCTTTTGACGTTATAAATGATTTTCTCTTAAGAAAAAAAAAAGGATTTTTGAGAATCTTTTGCATGTTTTCGATTTTGGTAAATCTTTAAAGTGTAATCTGTCTTACGTTAGTCCCACGCTTCTGCTGACGATACTGGTACTTCTCTTCCTGTCACAAGATTTTGTTCCCTTTTCCCAAAGTCGCGGTATTTATTTCAAATTTTAAATCCGTCTCTCTATATACACGAATCCTTACTCTTTACAATTATGGCTACGAAATTATTGTTAACGCTAGCGATATGTCGCTTAATTGTTACCGTGGGATTTACTTTTAACCCAAATGACCTTTTACGGCTCGGGCTCGATGGTAAACTCAGCGCAGCTCCAGCCGATTTACAATCCGCTTCAGTGGATTTTGGCGGAGTGTATAGAGCCGAGCCGATGGCGGTTCTTCACCCGGCTACATCCGAGGATGTAGCGAGGCTTGTAAAGGCCGCGTACGACTCGGCTCGTGGGTTCACCGTGTCGGCTAGAGGTCATGGACATTCTATAAACGGTCAAGCCATGACGAGAAATGGCGTTGTGGTTCAAATGAGCGGCGGCTTGAAAAATAAGATGTTGACTGTTTCTGAGAAATTCATGTACGCTGATGTTTGGGGTGGAGAATTATGGATTGATGTGTTGACGTCCACGTTAGAATATGGTCTCGCACCGAAATCATGGACTGATTATTTGTACTTAACTGTGGGTGGTACTCTCTCTAATGCTGGAATTAGTGGTCAAGCTTTTAATCATGGCCCTCAAATAAGCAATGTCCATGAACTCGATGTTGTTACAGGTAAGGGTGAGCTATTGACATGTTCAGAAAAGGAAAATTCTGAGCTGTTTCAAGCCGTTCTTGGTGGATTAGGACAATTTGGGATCATAACAAGAGCAAGAATTGCACTTGAACAAGCTCCTCAAAGGGTGAGGTGGATTCGAGTACTATATTCAAATTTTTCAACATTCACACATGACCAAGAATATTTAATATCATTGCATGGAAAACCATCTTCACAAAAATTTGATTATGTTGAAGGATTTGTTATAGTTGATGAAGGGTTAATAAACAATTGGAGATCTTCAATTTTCTCACCAAGTAACCCTGTCAAAGTTTCTTCTCTTAAAGCTGAAGGAGGTGTTTTATATTGCTTGGAAATCACAAAAAATTATCACCTTACAAATGCTGATACCATTGATCAGGAGATTGAAATATTATTAAAAAAATTAAATTATATTCCAGCTTCGGAGTTCACAACGGACCTTCCTTACGTGGATTTTTTGGACCGGGTTCACAAGGCCGAGTTAAAACTCCGGTCTAAAGGTTTATGGGAAGTGCCACATCCATGGCTAAATTTATTTGTACCAAAATCAAGAATTGCTGAGTTTGATAAAGGAGTATTTAAGGGTATTTTGGGAAACAAAACTAGTGGTCCAATACTCATATACCCTATGAACAAAAACAAATGGGACGATAGAAGTTCGGTAGTTACACCAGAAGAAGATGTGTTTTACTTGGTCGCGTTTTTGAGGTCAGCATTGGAGAGTGGTGATGAGACGCAAACGTTGGATTACCTAAGTAATCAAAATAATGAAATATTGAAGTTTTGTGAGGATGAAAGTATAAATGTGAAACAATATTTGCCTCATTATGACAATCAAAGAGAATGGAGGGACCATTTTGGAGAAAAATATTGGACAAGATTTCAACAAAGAAAATTAGAGTTCGATCCAAGGCATATATTAGCAACCGGCCAAAGGATTTTTATGCCTTCTTTTAATCCTAATATTGCTAATTGGTGACGTTTGATTACCTATTAATTAATTGGTATTAGTAGTTATTAATTAGGATTTAGAGATTAGTTGAGATCAAAATTAGTTAGTAATAGATTTGATAGGATCGTGTTTAGTGTATTTTATGTAAATATCAAGTGGGAAAAAAGAGCAAAATATTATTAATTCACTTATTTATTTAGTAAAGAAGAAATTAATCTTCATCCCAATGATTGGGTTTCGAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g080820.2.1SL2.50ch04:64892022..64897041525-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g080820.2SL2.50ch04:64891808..648973235,516-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g080820.2.1.1SL2.50ch04:64896471..64897323853-2
exonexon:Solyc04g080820.2.1.2SL2.50ch04:64895937..64896064128-n/a
exonexon:Solyc04g080820.2.1.3SL2.50ch04:64895174..64895449276-n/a
exonexon:Solyc04g080820.2.1.4SL2.50ch04:64893735..64893997263-1
exonexon:Solyc04g080820.2.1.5SL2.50ch04:64891808..64892359552-n/a
intronintron:Solyc04g080820.2.1.2SL2.50ch04:64896065..64896470n/a-n/a
intronintron:Solyc04g080820.2.1.3SL2.50ch04:64895450..64895936n/a-n/a
intronintron:Solyc04g080820.2.1.4SL2.50ch04:64893998..64895173n/a-n/a
intronintron:Solyc04g080820.2.1.5SL2.50ch04:64892360..64893734n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17809140%2Fdetails feature 17809140
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