Solanum lycopersicum mRNA Solyc05g005910.2.1

mRNA details  
Name
Solyc05g005910.2.1
Type
mRNA
Length
2,620
Organism
Solanum lycopersicum
Description
Peptide transporter (AHRD V1 **-* A6YJX4_9MAGN); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region
Location(s)
SL2.50ch05:697948..703061
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016020
Length
5114
Nb exon
7
Sifter term
  • GO:0080054
  • GO:0042936
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g005910.2.1 Peptide transporter (AHRD V1 **-* A6YJX4_9MAGN); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region

CAAATCAATTAGTCTTCTTCCATAATTTTTTTTAATCCTAAATACACATTCTCCATTCCAGCTTCCTCTGTTTTAGTTGAATCTCCGATCTTAGTTAACGATTTTGAGTTAGAAGATGAGTTCTCTGATTATACTTTTCTTCTACTATGAACTACTCTTTTCGCTTTAAGTTATCTATCTTTCGTCGAATATTAAACGAAAGAGCAATGTGAAGAGGAAAAACAGAGAGAGTTAAAATGAGGACAGAAATTAGACAAGTAGAAGAGCAGCCAAGAAAGGGTGGTCTTAGAACTATGCCTTTCATCATTGTGAATGAATCATTTGAGATGATAGCAACATATGGATTACAAACAAATATGTTAATTTATTTGATGACATTTTATAACATGAGTGCTGCCACTGCTACTACCATTCTTGGACTATGGGCTGCACTTTCAAATGGAATGGCTATTGTTGGGGCAATTGTTGCTGATTCTTACTGCGGTCGGTTTAGAGCTGTTGCCTTTGGATCCATCTCAACTCTTATTGGAATGATTGTTCTTTGGCTCACAACTATGATTCCAGAACTCACGTCTTTATCCTGCTCTCACTTCCAACATGTTTGTAATGGAACAACACCAATCCAACTTGCTGTTCTGTTTTCGTCTTTTGGGTTTATGTCAATTGGAGCTGGTTTTGTTAGACCTTGTTCTATAATATTTGGTGCTGATCAATTGGAAGATAAAAAGAACCCCGAGAATCAGAGGCGTATTGCAAGCTATTTCAACTGGTACTATATGGAGAGAGAGACAGAATTAGCTGAAGAGAAGACAAGAAAGGGTGGTCTTAGAACCATGCCTTTCATAATCTTGAATGAATCATTTGAGAGAATAGCAAGTTATGGTTTAGTGATGAACATGATAATTTATTTGATGGCATATTATAATATGAGTGCTGCTACTGGTACTAGTATTCTTGCATTATGGGCTGCACTTTCAAATGGATTGGCCATTGTTGGTGCAATTGTTGCTGATTCTTACTGCGGTCGATTTAAAGCTGTTGCCTTTGGATCCATCTCCACTCTTATTGGAATGATTATACTATGGCTCACAGCTATGATTCCGCAACTCAAGTCTTTACCTTGCTCTCACTTCCAACATGTTTGTAATGGAACAACAACAATCCAGCTTGCTGTTCTATTTTCATCTTTTGTGTTTATGTCAATTGGAACTGGTTTTGTTAGACCTTGTTCTATAATATTTGGTGCTGATCAATTGGGGGAAAAAGAGAACCACGAGAACCAGAGGGTTCTCGATAGTTATTTTAATTGGTACTATGCTAGCACGGGGATTTCAACTATTCTTGCAGTTACAGTTATCGTTTATATTCAAGATCGTTATGGTTGGAAAGTTGGCTTTGGTATTCCTGTTATCCTAATGTTTTTGTCTGTCTCAATGTTCCTAATCGGTTCTCCTCTTTATGTCAAAGTGAAAGCTAAAGAAAACTTGCTCATAGGATTGCTTCAAGCAATTGTAGCAGTTTTTAGGAAAAGAAATACTCGTCTTACATTGACTGATTGTGATAACTACTATCATTCGCCACTTGAATCCGAGATCTTGACCCCATCAAATGACTTCAGGTGTTTGAATAGAGCTTGTGTGATTGAAGATCCTCGAAAAGATTTGAATCCTGATGGATCAGCTTCGAATCCATGGTCTCTTTGTAGTGTGGAACAAGTTGAATTACTGAAGGCTCTTATTAGAGTACTTCCTATGTGGTCCACTGGTTTTATGATTTTTGTGGCTTTAAGTCAATTTTCATCCGTACTTCAAGCAAAGACCATGGATAGACATATCTTCCCTCACTTTGAAATACCAGCAGCATCATTCAGTGTATTCATGATTATTGCTTTAACAATCTGGATTACCTTCTATGATCGTGTTTTGGTCCCTTTGCTATCAAAATATACTGGACAGCCAAGAGGGCTAAGTCCTGTCATCCGAATGGGTATTGGCTTAATAGTCACCTGTATGTCTATGGCGTTGTCAGCAATAACAGAAAGCATAAGACGACAATTGGCAATAGAGGAAGGACATGAGGACGACCCAAGTGCGTTAGTGAACATGTCTGCTATGTGGCTCGTACCACAGTATGCACTACTCGGAGTGGCTGAGGGTTCCCATTCTGTTGGACAGATTGAGTTCTTCTACTCTCTGTTACCCAAAAGCATGTCCAGCATGGCATCAGCTATGTACACTGTTGGGACTGCTGTGTCGAGTTTGGTTGTAAGTATTCTGGTGAGTGGTGTGGATTGGCTTTCATCAACTGGAGGCAAAACTAGCTGGCTTTCGAGCAACATTAATAGGGGTCACCTAGATTACTATTTCTGGCTACTTACTTTTTTGAGTTTGCTCAACTTCTTCTATTTTCTGCTCATCTGCCGGTTATATGAACCTGACAATGATGGGAGCATTAGGCTATCTGATGAGACAGAAGAAACGTTGATGCTTTTACCTGAATCTTGATGATATATTGTACTGTCTTGCTGAATAATATACTATTATGCTAGCTTAGGTTTCTGTATATGTTTAGATTTCTACATTTCGTTTGACGGAAATTTGTATTATGTTTTGTTATGCCA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g005910.2.1SL2.50ch05:698063..702825756-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g005910.2SL2.50ch05:697948..7030615,114-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g005910.2.1.1SL2.50ch05:702753..703061309-2
exonexon:Solyc05g005910.2.1.2SL2.50ch05:702450..702667218-n/a
exonexon:Solyc05g005910.2.1.3SL2.50ch05:702079..702327249-n/a
exonexon:Solyc05g005910.2.1.4SL2.50ch05:700074..70014673-2
exonexon:Solyc05g005910.2.1.5SL2.50ch05:699756..699973218-n/a
exonexon:Solyc05g005910.2.1.6SL2.50ch05:699114..699664551-1
exonexon:Solyc05g005910.2.1.7SL2.50ch05:697948..6989491,002-n/a
intronintron:Solyc05g005910.2.1.2SL2.50ch05:702668..702752n/a-n/a
intronintron:Solyc05g005910.2.1.3SL2.50ch05:702328..702449n/a-n/a
intronintron:Solyc05g005910.2.1.4SL2.50ch05:700147..702078n/a-n/a
intronintron:Solyc05g005910.2.1.5SL2.50ch05:699974..700073n/a-n/a
intronintron:Solyc05g005910.2.1.6SL2.50ch05:699665..699755n/a-n/a
intronintron:Solyc05g005910.2.1.7SL2.50ch05:698950..699113n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17813108%2Fdetails feature 17813108
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