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Solanum lycopersicum mRNA Solyc05g005950.2.1

mRNA details  
Name
Solyc05g005950.2.1
Type
mRNA
Length
2,098
Organism
Solanum lycopersicum
Description
Solute carrier family 15 member 4 (AHRD V1 **-- S15A4_XENLA); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region
Location(s)
SL2.50ch05:717668..720026
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016020
Length
2359
Nb exon
4
Sifter term
  • GO:0080054
  • GO:0042936
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g005950.2.1 Solute carrier family 15 member 4 (AHRD V1 **-- S15A4_XENLA); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region

TGAATCTCAAAATTTATAATGCGTTTGACAGAGGATTACAGGGTAACTCTGTCACGTCTCGTTCTCAGTCAATATTTTGGAAGCAATAAATTTAAGGCCATAAACATGGTCCTGGGGTTTAGTGTTTTTTTCTCTCTCTCTTTTTGTGTCTGCTAATCATATATTAAAGCAAAGAAGAGAAGTGAAGAGGAAACAGAAAATAGCAGTGGAAATGGGCACAGAATCACAAGCTGAAATAAACACAAGAAAGGGTGGTCTTAGGACCATGCCATTCATCATTTTGAATGAATCATTTGAAAGGATAGCAAGTTATGGTTCACAAACAAACATGATAATTTATTTGATGACATATTATAACATGAGTGCTGCTACTGGCACTAGTATTATTGGTATATGGGGTGCACTTTCAAGTGGATTGGCTATTGTTGGGGCGATTATTGCTGATTGTTATTGGGGTCGATATAATGCTGTTGCCTATGGAACCATCTTCACTTTTATTGGAATGGTTATTCTCTGGCTTACATCAATGATTCCGCAACTCACAACTTTGGCATGTTCTCATTTTCAACATGTTTGTAATGGACCAACAGCATTCCAGCTTGCTGTTCTGTTTACATCTTTTGTGTTTACGTCTATCGGAGCTGGTTTTGTTAGACCTTGTTCTATAATGTTTGGTGCTGATCAATTGGAACAAAAAGGCAACCCTGAAAACAAGAAGATTGTTGAGAGCTATTTCAATTGGTACTATGCTAGCACAGGGGTTGCAACTATGATTGCAGTTACCGTTATTATTTATATTCAAGATCGTTATGGTTGGCAAATTGGCTTTGGTATCCCTGTTATACTCATGGTTTTGTCTGTCTCAACGTTCCTAATCGGTTCTTCTCTTTATATCAAAGTGAAACCCGATACAAACAACTTGCTATTAGGATTGTTCCAAGCAGGTGCAGCTGCTTTTAGAAAAAGGAAAACCCCTCTTTCATTGACTGGTTGTGATGACTACTATCATTCGCCATATGAAACAGAGGTCTTAACGCCATCAAAAGACTTCAGGTGCTTAAATAGAGCTTGTATGATTGAAGATCCTGAAAGAGATTTGAATGCTGATGGATCAGCTTCAAATCCATGGAATCTGTGTAGTGTGGAACGAGTTGAATCACTCAAGGCTCTTATTAGAATAATTCCTATGTGGTCAGCCGGTTTTATGATGTTTGTAGACATGAATGTATTCGCATTTTCTGTACTTCAAACAAAGACAATGGATAGACATATCTTGCCACACTTTGAAGTACCAGCAGCATCATTCAGCGTGTTCTTGATTATTGCTTTAACAATCTGGATTACTTTCTATGATCGTGTTTTGGTCCCTTTGCTATCAAAATATACTGGAAGGCCAAGAGGGCTAAGTCCTGTTACCCGAATGGGAATTGGGTTAACAGTCTCTTGTATGTCTATGGCATTGTCAGCAATAACAGAAAGCATAAGACGAAAAAGGGCAATCACAGAAGGGCATGAGGACGACCCAAATGCTTTAGTAAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTCGGGATAGCTGAGGCTACCCATGGAGTTGGACAGATTGAATTCTTCTACACTCTATTACCGAAAAGCATGGCCAGCATCGCGTCAGCTATGTACACTGTTGGAACTGCTGTGTCGAGTTTGATTGGAAGTATTCTGGTGAGTAGTGAGGATTGGCTTACATCAAGGGGAGGTAAAACGAGCTGGCTTTCTAGCAACATTAATAAGGGTCACCTGGATTACCATTTCTGGTTGCTTGCTTTAATGAGTTTTCTCAACTTGTTATATTTTCTATGGGTCTGCCGGTTTTATGAGACTGGGAATGATGAATTACCTCATGTGGCTGATGAGGAAGAGTGTGATTATAGACTCTTACATGAATCTTGATGATATGTTGTACTGCATTCTTGACAGTTAATTAAGTTAGATAATAAAGTGTTCTTATATGTTAAGACCTTTACAATCTTCATATAGTTTCATACATTCTGGATGAGTATGTCTCTGAACTTAACTTGTATTGAGTTGATAACTTTGAGTGTGCAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g005950.2.1SL2.50ch05:717823..719815577-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g005950.2SL2.50ch05:717668..7200262,359-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g005950.2.1.1SL2.50ch05:719746..720026281-2
exonexon:Solyc05g005950.2.1.2SL2.50ch05:719433..719650218-n/a
exonexon:Solyc05g005950.2.1.3SL2.50ch05:718798..719351554-1
exonexon:Solyc05g005950.2.1.4SL2.50ch05:717668..7187121,045-n/a
intronintron:Solyc05g005950.2.1.2SL2.50ch05:719651..719745n/a-n/a
intronintron:Solyc05g005950.2.1.3SL2.50ch05:719352..719432n/a-n/a
intronintron:Solyc05g005950.2.1.4SL2.50ch05:718713..718797n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17813144%2Fdetails feature 17813144
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