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Solanum lycopersicum mRNA Solyc05g005960.2.1

mRNA details  
Name
Solyc05g005960.2.1
Type
mRNA
Length
1,850
Organism
Solanum lycopersicum
Description
Peptide transporter 1 (AHRD V1 **-* Q7XAC3_VICFA); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region
Location(s)
SL2.50ch05:721713..723812
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016020
Length
2100
Nb exon
4
Sifter term
  • GO:0080054
  • GO:0042936
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g005960.2.1 Peptide transporter 1 (AHRD V1 **-* Q7XAC3_VICFA); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region

CAGAGAACGAAACTGAAAATGGGCACTGAAATACAAGATGAAGTGAACACAAGAAAGGGTGGTCTTAGGACCATGCCATTCATCATTTTGAATGAATCATTTGAAAGGATAGCAAGTTATGGTTCACAAACAAATCTGATAATTTATTTGATGACATATTATAGCATGAGTGCTGCTACGGGTACTAGTATTATTGGATTATGGGGTGCACTTTCAGGTGGATTAGCTATTGTTGGGGCGATTATTGCCGATTGTTATTGGGGTCGATATAATGCTGTTGCCTATGGAACCATCTTCACTTTTATTGGAATGGTTATTCTTTGGCTCACATCAATGATACCGCAACTCACGACTTTCGCCTGTTCACATTTTCAACATGTTTGTAATGGACCAACAGCATTCCAACTTGCTGTTCTGTCTACATCATTTGCGTTTACGTCTATTGGAGCTGGTTTTGTTAGACCTTGTTCTATAATGTTTGGTGCTGATCAATTGGAACAAAAAGGGAACCCTGAGAATGAGAAGATTATTGAGAGATATTTCAATTGGTACTATGCTAGCAATGGGGTTGCAACTATGATTGCAGTTACCACAATTATTTATATTCAAGATCGTTATGGTTGGCAAATTGGCTTTGGCGTCCCTGTTTTACTCATGGTTTTGTCTATCTCAACGTTCCTAATCGGTTCTCCTCTTTATATCAAAGTGAAAACTGATACAAACAACTTGCTAGTAGGATTGTCCCAAGCATGTGTAGCAGCATTTAGAAAAAGAAAAACCCGTCTTTCATTGACTGGTTGCGATGACTACTATCATTCGCCATATGAAACAGAGGTCTTAACGCCATCAAAGGACTTCAGGTGTTTAAATAGAGCTTGTATGATTGAAGATCGTGAAAGAGATTTGAATCCTGATGGATCAGCTTCAAATCCATGGAATCTGTGTAGTGTGGAACGAGTTGAATCACTCAAGGCTCTTATTAGAATAATTCCTATGTGGTCAACCGGTTTAATGGTGTTTGTGGACATGAATGTATTCGCATTTGCTGTACTTCAAACAAAGACAATGGATAGACATATCTTGCCGCACTTTGAAGTACCAGCAGCATCATTCAGTGTGTTCCTGATTATCGCTTTAACAATGTGGATTATTTTCTATGATCGTCTTTTGGTCCCTTTGCTATCTAAATATACTGGAAGTCCAAGAGGGCTAAGTCCTGTTACCCGAATGAGAATTGGGTTAACAGTCTCTTGTATGTCAATGGCATTGTCAGCAATAACAGAAAGCATAAGACGAAAAAGGGCAATCACAGAAGGGCATGAGGACGATCCAAATGCTTTAGTAAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTCGGTATAGCTACGGCTACACATGGAGTTGGACAAATTGAGTTCTTCTACACTCTATTACCGAAAAGCATGGCAAGCATCGCGTCTGCTATAGACACTGTTGGGAATGCAGCGTCGAGTTTGATTGGAAGTTTTCTTGTGAGTAGTGAGGATTGGCTTACATCAACAGGAGGTAAAACAAGCTGGCTTTCTAGCAACATTAATAAAGGTCACCTGGATTACCATTTCTGGCTGCTTACTTTTTTGAGTTTGCTCAACTTGTTATATTTTCATTTCATCTGCCGGTTTTATGAAACTGGGAATGATGCATTACCTCATGTGGCTGATGAGGAAGAGTGTGATTATAGACTCTTACATGAATCTTGATGATATATGTTGTACTGCATTCTTGACAGTTAATAAAGTTAGATAATGAAGTGTTTTTGTATGTTAACACCTCTACAATCTTCATATAATTTTTCTATGTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g005960.2.1SL2.50ch05:721730..723711577+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g005960.2SL2.50ch05:721713..7238122,100+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g005960.2.1.1SL2.50ch05:721713..72180088+n/a
exonexon:Solyc05g005960.2.1.2SL2.50ch05:721884..722101218+n/a
exonexon:Solyc05g005960.2.1.3SL2.50ch05:722187..722740554+2
exonexon:Solyc05g005960.2.1.4SL2.50ch05:722823..723812990+n/a
intronintron:Solyc05g005960.2.1.1SL2.50ch05:721801..721883n/a+n/a
intronintron:Solyc05g005960.2.1.2SL2.50ch05:722102..722186n/a+n/a
intronintron:Solyc05g005960.2.1.3SL2.50ch05:722741..722822n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17813153%2Fdetails feature 17813153
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