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Solanum lycopersicum mRNA Solyc05g006130.2.1

mRNA details  
Name
Solyc05g006130.2.1
Type
mRNA
Length
1,876
Organism
Solanum lycopersicum
Description
ATP-dependent RNA helicase (AHRD V1 *-** D3BPQ9_POLPA); contains Interpro domain(s) IPR001650 DNA/RNA helicase, C-terminal
Location(s)
SL2.50ch05:839061..843802
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
4742
Nb exon
7
Sifter term
GO:0004004
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g006130.2.1 ATP-dependent RNA helicase (AHRD V1 *-** D3BPQ9_POLPA); contains Interpro domain(s) IPR001650 DNA/RNA helicase, C-terminal

TGTAGCTGTTTATAAAGAAGCCCCAAATTCTTAATTTTAGCTAAAAAGGGGTTAAAGCTGATGATTTTACAGCATTCAATTTCAATTTGTAAGCTATGGAGGTCGTCATCTCCACCAAACCTCTATTTGTTTCGACCCTTTGTTGCTTATCAACCACACTGTTGTAGGATTAGAGCATTTGGGTCTGCTGTTTCAGCCTCTAAAGTTGTTGAAACAAATACAAATGAGACATTTTTTGCTGAAGAAAGTGTTTCTTGGACCTCTTTGGGTGTGTCTGAATCATTATCTCGTGCTTTATCTAGCAGTGGCCTTCATAGACCATCTTTAATTCAGGCAGCTTGTATACCAAGTATACTTTCAGGTGTTGATGTGGTGGTTGCTGCAGAGACTGGTAGCGGCAAGACTCATGGTTACCTAGTGCCACTGATTGATAAGCTATGCCAAATATCTGATAGTTCAGGGGCTATTACTGGCCAGGATGCCAGGAAGCACAATCGTCTTTCGCTTGTTCTTTGTCCTAATGTTATGTTATGTGAGCAAGTGGTTCGAATGGCTAATAGTCTTTGCAATGATAGTGGTACACCACTTCTCAGTATTGCAGCTGTTTGTGGCCGACAGGTCTGGCCTGTAAAAGAACCAGATGTAATGGTGTCTACTCCGGCAGCACTTCTAAATTATCTCTATTCTATAGACCCAGAAAGGCGAAGACGTTCAGAGTTTATACGAAGTGTTAAATATGTGGTTTTTGATGAGGCAGATATGCTGCTTTGTGGAAGTTTCCAGAACCAAGTGGTCCGACTTATAAATATGCTTCGTTTTGATGAGAAGCAGTTATCTCGTTCTAAAAATTCTGGAGCTGAGATGTCATCTACTTCAGACTTGGAAGAGTTTAGGGACCTAAAAGCAGATTATGGTGAAGATGCAGATGAAGTTGAAGATGAAGATGAAGATGAGGATGAAGATACTGAAGTTGGCAAAGATAGAGCAAATCTAGAAACAGATACCAAGGGGCTAAAGAGAAGAGATTGGCGAAGAGTGAGAAAGATATATGAGCGGAGCAAGCAGTACATTTTTGTTGCAGCGACCCTTCCTGAAAATGGGAAGAGAACTGCTGGAGGAGTGTTGAAGCGGATGTTTCCTGAAGCTACCTGGGTTAGTGGAAATTATCTTCATCAGCACAGCCCGAGGTTGGAGCAAAGGTGGATTGAAGTTTCAGTTGACACCCAAGTGGACATTCTCATAAATGCTGTGGAAAATGGGAATTCTATGGCAGATAGTAGTCCTGGAGTGCTCCGAACCATGGTCTTTGCAAATACTGTTGACGCTGTGGAAGCTGTTGCTAATATCTTGACAAGAGTTGGACTTGAATGTTTCCGTTACCATAGTGATAGCTCTTTGGAGGAGCGCACAAAGAATTTACTTGATTTCCAACAGAAAGGTGGTGTTTTTGTGTGCACGGATGCTGCAGCACGTGGTATTGACATTCCAAATGTTTCACATGTTATTCAGGCAGAGTTTGCCACATCTGCTGTAGATTTCTTGCACAGGGTTGGACGTACAGCTAGAGCAGGCCAACCTGGCCTTGTTACGAGTCTATATTCAGAATCAAACCGTGATCTAGTTGCTGCCATTCGTCATGCAGAAAAAATTGAAGAGCCAGTGGAGAAAGCATTTAGCAGAAAAAGGAGTTTTCGCAATAAAATCAAGAAAAGAGGCAGAGAAGCTTCACACATGAGGTGAAAAATGTGAATTTTGACTTGGGACTTGGGAGTGAGTTTCTATTTGCATTTGTTTTCTCCACACTGTTTGTATTTTATAGTGTTATTGTAATATACTGTAAAAGAAATTAATTAGTTCAGAGTATTTAATATGAAAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g006130.2.1SL2.50ch05:839120..843666560+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g006130.2SL2.50ch05:839061..8438024,742+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g006130.2.1.1SL2.50ch05:839061..839393333+n/a
exonexon:Solyc05g006130.2.1.2SL2.50ch05:840968..841252285+n/a
exonexon:Solyc05g006130.2.1.3SL2.50ch05:841425..841547123+n/a
exonexon:Solyc05g006130.2.1.4SL2.50ch05:841631..842076446+n/a
exonexon:Solyc05g006130.2.1.5SL2.50ch05:842436..842757322+n/a
exonexon:Solyc05g006130.2.1.6SL2.50ch05:843079..843231153+1
exonexon:Solyc05g006130.2.1.7SL2.50ch05:843589..843802214+n/a
intronintron:Solyc05g006130.2.1.1SL2.50ch05:839394..840967n/a+n/a
intronintron:Solyc05g006130.2.1.2SL2.50ch05:841253..841424n/a+n/a
intronintron:Solyc05g006130.2.1.3SL2.50ch05:841548..841630n/a+n/a
intronintron:Solyc05g006130.2.1.4SL2.50ch05:842077..842435n/a+n/a
intronintron:Solyc05g006130.2.1.5SL2.50ch05:842758..843078n/a+n/a
intronintron:Solyc05g006130.2.1.6SL2.50ch05:843232..843588n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17813340%2Fdetails feature 17813340
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