Solanum lycopersicum mRNA Solyc05g007770.2.1
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Name | Type |
Length
1,308
|
Organism |
Description
NAC domain transcription factor (AHRD V1 **** Q5DM36_WHEAT); contains Interpro domain(s) IPR003441 No apical meristem (NAM) protein
|
Location(s)
SL2.50ch05:2229720..2231644
|
Ontology term(s) |
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0045449
- Length
- 1925
- Sifter term
- GO:0003700
![]() | spliced mRNA sequence, including UTRs |
>Solyc05g007770.2.1 NAC domain transcription factor (AHRD V1 **** Q5DM36_WHEAT); contains Interpro domain(s) IPR003441 No apical meristem (NAM) protein
CTAAAATTTCATTTTCTCTCAATTTCCTTGCTTTTGTTTAAAAAAAACAAAGAAAAAGAAGAATTGTTCCATTTTATTTATTTCTATATTTTTGTATAAAATGGTTGGAAAAATTAGCTCTGATCTTCCTCCTGGATTTAGGTTTCATCCAACAGATGAGGAATTAATCATGTACTATCTTCGATATCAAGCTACTTCAAGGCCATGCCCTGTCTCAATTATCCCCGAAATTGATGTCTACAAGTTCGATCCCTGGGTATTACCTGAAAAGGCAGAATTTGGAGACAATGAGTGGTATTTTTTTACCCCTAGAGATAGAAAATATCCAAATGGTGTTAGGCCAAATAGAGCAGCTGTGTCAGGTTATTGGAAGGCTACTGGCACTGATAAAGCAATTTATAGTGCAAATAAATATGTTGGAATTAAAAAAGCACTTGTTTTTTACAAAGGCAAACCACCAAAAGGTGTCAAGACTGATTGGATCATGCATGAATATCGTTTGAGTGATTCAAAGTCTCAAACATCTAAGCAAAGTGGATCTATGAGGTTAGATGATTGGGTACTATGTAGAATTTATAAGAAGAAAAATTTGGGGAGAACTATAGAGATGATGAAAGTTGAAGAAGAAGAATTAGAGGCACAAAATGTGAGTACTACAAATAATGAAATTGAAGTTGTTGGTGGACCACAAACAATGAAATTACCAAGAATTTGTTCATTGTCACATCTATTGGAATTGGATTATTTTGGATCAATTCCACAATTACTAAGTGACAATTTATTATATGATGACCAAGGTTACACAATGAATAATGTGAATAACACAAGTAATGTGGATCAAGTATCATCACAACAACAAAATACAAATAATATTACAAGCAATAATTGTAATATTTTCTTCAATTATCAACAACCACTTTTTGTGAATCCAACATTTCAATCTCAGTGATGATCAATAGCGGAGACAGAATTTTCATCAAGAATCTTCTAAATAGATTCTCAGTTATATCAAAGGGGTTCAATATGTAGATAATTATATATAAAATATTTTTTCAACGAAGAGGTTCATGGCCGGGTGAAAATATATTTATATGAAGGCTATTGGATGAAAAGGTGACATCAAAAGTTTATGACAACAATTGTAAAATATAATCAAATGTTATGTCATTAGTATTATTAGCAACAAACCTTGTAGTAGGGCAACAAATTGTTGTTGTATTATTTTAGAATTTAGTTTCTCAGTTTGTATTTGGAAAAAAAAAACTAATTTACTTTGTGAAATTTTAATAAATATTTTTCAGTATTCTA
CTAAAATTTCATTTTCTCTCAATTTCCTTGCTTTTGTTTAAAAAAAACAAAGAAAAAGAAGAATTGTTCCATTTTATTTATTTCTATATTTTTGTATAAAATGGTTGGAAAAATTAGCTCTGATCTTCCTCCTGGATTTAGGTTTCATCCAACAGATGAGGAATTAATCATGTACTATCTTCGATATCAAGCTACTTCAAGGCCATGCCCTGTCTCAATTATCCCCGAAATTGATGTCTACAAGTTCGATCCCTGGGTATTACCTGAAAAGGCAGAATTTGGAGACAATGAGTGGTATTTTTTTACCCCTAGAGATAGAAAATATCCAAATGGTGTTAGGCCAAATAGAGCAGCTGTGTCAGGTTATTGGAAGGCTACTGGCACTGATAAAGCAATTTATAGTGCAAATAAATATGTTGGAATTAAAAAAGCACTTGTTTTTTACAAAGGCAAACCACCAAAAGGTGTCAAGACTGATTGGATCATGCATGAATATCGTTTGAGTGATTCAAAGTCTCAAACATCTAAGCAAAGTGGATCTATGAGGTTAGATGATTGGGTACTATGTAGAATTTATAAGAAGAAAAATTTGGGGAGAACTATAGAGATGATGAAAGTTGAAGAAGAAGAATTAGAGGCACAAAATGTGAGTACTACAAATAATGAAATTGAAGTTGTTGGTGGACCACAAACAATGAAATTACCAAGAATTTGTTCATTGTCACATCTATTGGAATTGGATTATTTTGGATCAATTCCACAATTACTAAGTGACAATTTATTATATGATGACCAAGGTTACACAATGAATAATGTGAATAACACAAGTAATGTGGATCAAGTATCATCACAACAACAAAATACAAATAATATTACAAGCAATAATTGTAATATTTTCTTCAATTATCAACAACCACTTTTTGTGAATCCAACATTTCAATCTCAGTGATGATCAATAGCGGAGACAGAATTTTCATCAAGAATCTTCTAAATAGATTCTCAGTTATATCAAAGGGGTTCAATATGTAGATAATTATATATAAAATATTTTTTCAACGAAGAGGTTCATGGCCGGGTGAAAATATATTTATATGAAGGCTATTGGATGAAAAGGTGACATCAAAAGTTTATGACAACAATTGTAAAATATAATCAAATGTTATGTCATTAGTATTATTAGCAACAAACCTTGTAGTAGGGCAACAAATTGTTGTTGTATTATTTTAGAATTTAGTTTCTCAGTTTGTATTTGGAAAAAAAAAACTAATTTACTTTGTGAAATTTTAATAAATATTTTTCAGTATTCTA
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc05g007770.2.1 | SL2.50ch05:2229819..2231285 | 283 | + | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc05g007770.2 | SL2.50ch05:2229720..2231644 | 1,925 | + | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc05g007770.2.1.1 | SL2.50ch05:2229720..2229985 | 266 | + | n/a |
exon | exon:Solyc05g007770.2.1.2 | SL2.50ch05:2230096..2230376 | 281 | + | n/a |
exon | exon:Solyc05g007770.2.1.3 | SL2.50ch05:2230884..2231644 | 761 | + | 2 |
intron | intron:Solyc05g007770.2.1.1 | SL2.50ch05:2229986..2230095 | n/a | + | n/a |
intron | intron:Solyc05g007770.2.1.2 | SL2.50ch05:2230377..2230883 | n/a | + | n/a |
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