Sol Genomics Network

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Solanum lycopersicum gene Solyc05g008990.2

Gene

Name Solyc05g008990.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc05g008990	Length 2,841

Description

Receptor-like kinase (AHRD V1 *-*- A7VM40_MARPO); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

Location(s)

SL2.50ch05:3177653..3180493

GFF source

ITAG_eugene

From BOGAS: 1

Length: 2841

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc05g008990.2.1	SL2.50ch05:3177653..3180493	2,248	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc05g008990.2 SL2.50ch05:3177653..3180493
TAGAGTTAAGACTTATGGCTTTAGCCCTTTTTTTTGCTATGTTCTTTATGTTTCATGTTGTTATAGTTGAAGTTGAGAGTAAATCATCATGTCCAAAAGAGTTCAATTGTGGAAGACTTGGTATCATGAGTTATCCTTTTTCAGAATTCAATAAACCATATTGTGGATTATCAAAGATTGATTGTAACAACACATTTCAATATCCAAAAGTTGAGATTGAAAGTGTGACATACAATGCTTACAAGAAGTGGCTATGGGTGAATGGTATCGATCTTTCGGACTCGATTCTTGAAGGTTATTTAGCTAATAGAAGTTGTAAATCCTTTGAAAGGAACTTATCTTTTCCTAATACACCTTCTGTTTCATTTGGTGTATTCAACAATATCACTTTGTTCAAATGTATGAATGGTAGTAGTAGTAGTAATGAGGAGGTAGATGGCTATTTTCGACGTTATGAAAAGTACTTGAACTGTGATGGATTTAACTTGTACTATCATAAACCAAGAACAGATCATAGAAACTATAGTATGGAAGTTGATGAAGATGATCTTCCTGTAAACTGCTCGATTATTCGATTACCTTTGAAGTATATTTCACCTTCAGTACCTGTTCCTTCTGATTTGTTTGAGTTGTTGAGTTCTAATTTCACATTGGATTGGGAAGTGTCTAAAGATTGTTCCAAGTGTTCTTATAGAGAAGGACAATGCCAAAATGACAGCAAAAATAACTTCTTTTGCTCTAAAGGTATTTGTTGCTATCTTTACTATTGTTAATGTGGATGAATGTGCATTTATTTCAGTCTTATTGTGACTGATTTGAACTGTCATTTGTGTGTATTGCAGCAGCTAAAAAGAATTTGGGATTGATACTAGGCTCAGGTACTTTACTATAGTATACAATCAATAACTTTTGGCATAATACATAAATAATCAACCGACAAGTAAACATTCCAACTTTGAGTATATATATGCACATCTAGACATCTAAACTTGTCTTGGTTGTGTTAGTTGAACACTCCAACTCACAAAATGATCATCAGAACACCTCCAAAATGTATTCACATTGGCTGTCCATGAGACATAGTAAGGATGAGTTTGGAGTGTTTTAGTTGTAAGTTAAGCCCACGCTGAGGTGTCTAGATGTGCACTAATACTATGCCATAACTTTTATTTGTAACTCTGTGTTGCTCGAACTCTTCAAAAATGTTATCAGGTTCATGGTGACACGTGTACGAGAGCATTTTGGGTGAGTCTGAACTAACCTGTTTAATGTCTTATCTGATCTGCAGTGCTTGGTGGATTGTTTATAATAGCAATCATCATAGTGATCAATATAATCTGCTGTTGCAAGAAGAGTCATAGAAGTTTTACTAATGTTCTTCCAAGAAGCACCCCTTCAGACCCCTCAACACAAAGCTATGAATTAGACAGCGGGTTCTCTGGGGTTCCCGTCTTCTCTTATGCTGAACTTCAACAAGCTACCATGAATTTCGATTCATCCAGAGAACTCGGGGATGGAGGATATGGAACAGTTTACTATGGTAAGAAACTTTTGACAATGCAGATGTGTCTAGCCATCACTCTCTTCATTTTCGTTGATTCTAGTTCTTGTATGCTACAAACTAGGGAAACTTCAGGATGGAAGAGAAGTTGCAGTAAAACGCCTCTACGACCACAATGCTAGGAGAAAGGAACAGTTTGCAACTGAGATTGAAATTCTAACAAGGTTAAGACACAAAAATCTTGTCACTCTTTATGGTTGCACGTCTAAACTCAGCGATCAACTCTTACTTGTATATGAGTACGTCCCAAATGGAACGATTGCTGATCACTTGCACGGTCATAAGATGAAGGACGGCTCACTCACGTGGCCTATACGCATGAAAATTGCTGTTGAAGCTGCCACTGCTCTGGCATATCTCCATGCTTCTGATATAATCCACCGCGATGTGAAGAGTAACAACATACTACTTGATCAAAACTTCTGTGTCAAAGTTGGAGATTTTGGACTTTCAAGACTTCATCCAACGGATATTTCTCACATATCAACTGCACCTCAAGGTACCCCTGGTTACGTCGATCCAAAGTACCACGAATGTTACCAGCTTACTGATAAAAGTGATGTTTATAGCTTTGGGGTTGTCCTTGTTGAGCTGTTATCATCCATGCCTGCAGTAGACTTCAGTAGACATAACGAAGAGATCAACTTATCTAACTATGCAATAAACAGGATTTTAAGGTGTGCATTTGATGAGTTGATAGACCCATCCCTCGGTTTTCAGTCTGATGGAGAAGTTAGGAGGATGACTATTTCAGTAGCCGAGATATCGTTTAGATGCTTGCAACATGACAAGGACATGAGACCTAGTATGGTTGAAGTACTAGAAACATTGCAAGAAATTCAGCATGGTGAGTATATACATGATAAGAAAATCGATTGTGACGGAAACACGAAAGAGAGTGTACAAGTCCCTCTTTCACCTGAATCAGAAGTAGATGTATTATTGAAGAAACTCAACAACAAGTTTCCAACTTCACCAATTTCAGTAACTCAAGTGTGGATTAGTGACTCTAGCACAAGTATCACAAGTACATAATATTCATCTTTTTTTGGTTTCACAGTTCATGTAGATAAACAAAAATACACAGAAAACTGAGCCAAGTCATAACATTAACTGAATATTATTGGGTACTTGTTTCATGCTCGATTCGTTCTAGAAGTCGCCTCCAAGTCTCCTGCTCTTATTAAGACCGCCCGCAGTAGAAGCTACTAGTGGCACTGAGTGTACAGTCTATCCGCTCTCAAGTGGTATTACTAACCATTCTAGAGGAGCAGTCGATT

Download sequence region

Download sequence (2.8Kb)

Get flanking sequences on SL2.50ch05

mRNA Solyc05g008990.2.1

Ontology terms

terms associated with this mRNA

GO:0006468 – protein phosphorylation

cDNA sequence

spliced cDNA sequence, including UTRs

>Solyc05g008990.2.1 Receptor-like kinase (AHRD V1 *-*- A7VM40_MARPO); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
TAGAGTTAAGACTTATGGCTTTAGCCCTTTTTTTTGCTATGTTCTTTATGTTTCATGTTGTTATAGTTGAAGTTGAGAGTAAATCATCATGTCCAAAAGAGTTCAATTGTGGAAGACTTGGTATCATGAGTTATCCTTTTTCAGAATTCAATAAACCATATTGTGGATTATCAAAGATTGATTGTAACAACACATTTCAATATCCAAAAGTTGAGATTGAAAGTGTGACATACAATGCTTACAAGAAGTGGCTATGGGTGAATGGTATCGATCTTTCGGACTCGATTCTTGAAGGTTATTTAGCTAATAGAAGTTGTAAATCCTTTGAAAGGAACTTATCTTTTCCTAATACACCTTCTGTTTCATTTGGTGTATTCAACAATATCACTTTGTTCAAATGTATGAATGGTAGTAGTAGTAGTAATGAGGAGGTAGATGGCTATTTTCGACGTTATGAAAAGTACTTGAACTGTGATGGATTTAACTTGTACTATCATAAACCAAGAACAGATCATAGAAACTATAGTATGGAAGTTGATGAAGATGATCTTCCTGTAAACTGCTCGATTATTCGATTACCTTTGAAGTATATTTCACCTTCAGTACCTGTTCCTTCTGATTTGTTTGAGTTGTTGAGTTCTAATTTCACATTGGATTGGGAAGTGTCTAAAGATTGTTCCAAGTGTTCTTATAGAGAAGGACAATGCCAAAATGACAGCAAAAATAACTTCTTTTGCTCTAAAGCAGCTAAAAAGAATTTGGGATTGATACTAGGCTCAGTGCTTGGTGGATTGTTTATAATAGCAATCATCATAGTGATCAATATAATCTGCTGTTGCAAGAAGAGTCATAGAAGTTTTACTAATGTTCTTCCAAGAAGCACCCCTTCAGACCCCTCAACACAAAGCTATGAATTAGACAGCGGGTTCTCTGGGGTTCCCGTCTTCTCTTATGCTGAACTTCAACAAGCTACCATGAATTTCGATTCATCCAGAGAACTCGGGGATGGAGGATATGGAACAGTTTACTATGGGAAACTTCAGGATGGAAGAGAAGTTGCAGTAAAACGCCTCTACGACCACAATGCTAGGAGAAAGGAACAGTTTGCAACTGAGATTGAAATTCTAACAAGGTTAAGACACAAAAATCTTGTCACTCTTTATGGTTGCACGTCTAAACTCAGCGATCAACTCTTACTTGTATATGAGTACGTCCCAAATGGAACGATTGCTGATCACTTGCACGGTCATAAGATGAAGGACGGCTCACTCACGTGGCCTATACGCATGAAAATTGCTGTTGAAGCTGCCACTGCTCTGGCATATCTCCATGCTTCTGATATAATCCACCGCGATGTGAAGAGTAACAACATACTACTTGATCAAAACTTCTGTGTCAAAGTTGGAGATTTTGGACTTTCAAGACTTCATCCAACGGATATTTCTCACATATCAACTGCACCTCAAGGTACCCCTGGTTACGTCGATCCAAAGTACCACGAATGTTACCAGCTTACTGATAAAAGTGATGTTTATAGCTTTGGGGTTGTCCTTGTTGAGCTGTTATCATCCATGCCTGCAGTAGACTTCAGTAGACATAACGAAGAGATCAACTTATCTAACTATGCAATAAACAGGATTTTAAGGTGTGCATTTGATGAGTTGATAGACCCATCCCTCGGTTTTCAGTCTGATGGAGAAGTTAGGAGGATGACTATTTCAGTAGCCGAGATATCGTTTAGATGCTTGCAACATGACAAGGACATGAGACCTAGTATGGTTGAAGTACTAGAAACATTGCAAGAAATTCAGCATGGTGAGTATATACATGATAAGAAAATCGATTGTGACGGAAACACGAAAGAGAGTGTACAAGTCCCTCTTTCACCTGAATCAGAAGTAGATGTATTATTGAAGAAACTCAACAACAAGTTTCCAACTTCACCAATTTCAGTAACTCAAGTGTGGATTAGTGACTCTAGCACAAGTATCACAAGTACATAATATTCATCTTTTTTTGGTTTCACAGTTCATGTAGATAAACAAAAATACACAGAAAACTGAGCCAAGTCATAACATTAACTGAATATTATTGGGTACTTGTTTCATGCTCGATTCGTTCTAGAAGTCGCCTCCAAGTCTCCTGCTCTTATTAAGACCGCCCGCAGTAGAAGCTACTAGTGGCACTGAGTGTACAGTCTATCCGCTCTCAAGTGGTATTACTAACCATTCTAGAGGAGCAGTCGATT

Download sequence (2.2Kb)

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc05g008990.2.1	SL2.50ch05:3177666..3180248	663	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc05g008990.2	SL2.50ch05:3177653..3180493	2,841	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc05g008990.2.1.1	SL2.50ch05:3177653..3178396	744	+	n/a
exon	exon:Solyc05g008990.2.1.2	SL2.50ch05:3178495..3178530	36	+	n/a
exon	exon:Solyc05g008990.2.1.3	SL2.50ch05:3178941..3179192	252	+	2
exon	exon:Solyc05g008990.2.1.4	SL2.50ch05:3179278..3180493	1,216	+	2
intron	intron:Solyc05g008990.2.1.1	SL2.50ch05:3178397..3178494	n/a	+	n/a
intron	intron:Solyc05g008990.2.1.2	SL2.50ch05:3178531..3178940	n/a	+	n/a
intron	intron:Solyc05g008990.2.1.3	SL2.50ch05:3179193..3179277	n/a	+	n/a

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Related views

Genetic loci

Tomato locus Solyc05g008990

http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17816387%2Fdetails feature 17816387

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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