Solanum lycopersicum mRNA Solyc05g009500.2.1

mRNA details  
Name
Solyc05g009500.2.1
Type
mRNA
Length
1,965
Organism
Solanum lycopersicum
Description
Peptide transporter (AHRD V1 **-* A6YJX4_9MAGN); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region
Location(s)
SL2.50ch05:3668010..3672604
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016020
Length
4595
Nb exon
4
Sifter term
  • GO:0042937
  • GO:0042936
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g009500.2.1 Peptide transporter (AHRD V1 **-* A6YJX4_9MAGN); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular region

GAGCACACAATTACATACAAATATGGAAGTGATGAATAAGAAGGAAAACTCCTCTAGAAGGATGAAGGGTGGAATGATCACTATGCCCTTCATATTTGCAAATGAGATATGTGAGAAATTGGCAGTGGTTGGGTTTGGTACAAATATGGTCATTTACTTGACAAATGAACTCCATCTTCCATTAACAAAAGCAGCAAATACACTAACAAATTTTGGTGGCACTGCAAGTTTGACACCATTGTTTGGAGCTTTTATTGCTGATACTTTTGCTGGAAGATTTTGGACTATAACTGTTGCTTCTATCATCTACCAAATTGGCATGATCATATTAACATTATCAGCAATACTACCACAACTAAGGCCACCATCATGCAAAGATGATGAATATTGCAAAGAAGCAAATTCAAGTCAAATAGCCATTTTATATGTGTCATTACTCTTAACAGCCTTTGGGTCAGGTGGAATTAGGCCATGTGTTGTTGCATTTGGGGCTGACCAATTTGATGAAAATGATCCAAATCAAAAAACACAAACATGGAAATTCTTTAATTGGTATTATTTTTGTATGGGATTTTCAATGCTTGTGGCTGTCACAGTAATTGTTTATATTCAAGACAATATTGGATGGGGTGTTGGATTTGGTGTCCCAACAATTGCTATGCTTATATCAATTGTTGTTTTTATATTTGGATACCCTTTGTATAGAAATTTGGATCCTGCTGGTAGCCCTTTTACTAGGCTAGTGCAAGTTTGTGTTGCTGCCTACAAAAAGAGGAAATTGGATATGGTAAATGATACTAATTTGCTTTATCAAAATCAAGAACTTGATGCTGATATTTCTACTGCTGGCAAGCTTGTCCACACTAAGCAAATGAAATTGTTGGACAGAGCAGCAATAGTAACAGAGGAGGACAACCCTAAATCTCCGAATCTATGGAGGCTAAACACAGTTCATCGCGTAGAAGAACTCAAATCGATCATAAGAATGGGTCCAATATGGGCATCAGGGATCATCCTGATCACAGCATACGCTCAACAATCCACATTCTCAGTCCAACAAGCCAAAACAATGAACAGACACCTACTAAACTCCTTCGAAATCCCAGCTGCCTCGATGACTGTCTTCACATTAACGACAATGCTATGCACCATTGCCTTCTATGACCGCGTATTTGTACCTATTGCACGTAAGTTCACTGGACTCGAACGAGGAATCTCATTCCTAAGTAGAATGGGAATTGGATTCTTCATTTCTGTTCTAGCTACATTAGTAGCTGGATTTATTGAAGTTAAACGAAAAAATGTTGCATCGACTTATGGACTAGTCGATAAACCTAAATCACTAGTTCCAATTTCAGTATTTTGGCTAGTGCCACAGTATTGTTTACATGGTATAGCTGAGGCATTTATGTCAATTGGACATCTTGAATTTTTCTATGATCAAGCTCCAGAGAGTATGAGAAGTACAGCAACCGCGTTATTTTGGACATCGATTTCAGCTGGGAACTATTTGAGTACATTTCTGGTTTCGTTAGTTCATAAATTTACCAATTGGCTGCCTGATAATAACTTGAATGAGGGGAGATTAGAGTATTTTTACTGGTTAATTACGATTTTACAAGTGGTTAATTTGATTTACTATGTGTTTTGTGCAAGACTATATACTTTTAAGCCTATTCAGATGCACAAAACAGAGGAGTTGGAGACTAGAAAAGAGGGGATTGAACTTGTAAACAATGTTTAGTTTGTATTTTGCAACTTTAGTTTTATAGTATTATGTAATAGTTTTTTTAGGTTATGAGGAAAGAAAAGAATATGGTTATGAATAGTTTAATGTATTATGTAATAATAATTATTAATAGATGGAATAGTAAAACTTTGACTATTTGTATTACGAATTTAAGTTATATGTGCATGAACTTCAGGTAAATGACTGGAGTTTATTATTCATACGTGTATGAACGT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g009500.2.1SL2.50ch05:3668230..3672582574-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g009500.2SL2.50ch05:3668010..36726044,595-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g009500.2.1.1SL2.50ch05:3672507..367260498-2
exonexon:Solyc05g009500.2.1.2SL2.50ch05:3671845..3672062218-n/a
exonexon:Solyc05g009500.2.1.3SL2.50ch05:3670495..3671054560-1
exonexon:Solyc05g009500.2.1.4SL2.50ch05:3668010..36690981,089-n/a
intronintron:Solyc05g009500.2.1.2SL2.50ch05:3672063..3672506n/a-n/a
intronintron:Solyc05g009500.2.1.3SL2.50ch05:3671055..3671844n/a-n/a
intronintron:Solyc05g009500.2.1.4SL2.50ch05:3669099..3670494n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17816905%2Fdetails feature 17816905
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