Solanum lycopersicum mRNA Solyc05g009880.2.1

mRNA details  
Name
Solyc05g009880.2.1
Type
mRNA
Length
1,308
Organism
Solanum lycopersicum
Description
Transcription factor bHLH30 (AHRD V1 **-* BH030_ARATH); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH
Location(s)
SL2.50ch05:4099737..4103336
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3600
Nb exon
3
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g009880.2.1 Transcription factor bHLH30 (AHRD V1 **-* BH030_ARATH); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH

TACAAGTTGAAATCTCAAACCTAAAAAAAAAAAGAACTTTTCTTTTCTCTCTCAAAACAAACCAAAAAAATAAAAATAAATCTTAGTTCTTCACTATTCTACATCAAAGCAAAGCAAAGGTATGCATCCACAAAGTTTCATGAACCCGGTTCACTTCCAAAGCAACTCAGAAATGTTACCATGGTCAATTCCACCGGTTCAACCATTTATGAACCCGGTTCACCACCATGATCAGTCATTTCTCCTCCCTCCATCACCATCGGCTTACGGTTTATTTAATCGTAACACTAACACAGATCAACAACACCTCCGGTTCATCTCAGATAGTTTAGTAGGTCAAGTGGTTCATCATCATCATCATCATAATCAACCCGGCTCAATAGCACCTTTTGGTTTACAAGCTGAGTTACAAAAAATGAGTGCACAAGAAATAATGGATGCTAAGGCATTGGCTGCATCTAAAAGCCATAGTGAAGCTGAGAGAAGACGTAGAGAAAGAATCAATAATCATCTTGCTAAATTGAGAAGCCTTCTTCCTAATACTACTAAAACAGACAAAGCTTCATTGCTAGCAGAAGTGATACAACATGTGAAAGAGTTAAAAAGACAAACATCCTTAATATCAGAGACAAGTCTTGTCCCAACTGAAATTGATGAATTAACAGTTGATAATGCAACATCTGATGAAGATGGTAAGTTTATAATAAAGGCCTCTTTGTGTTGTGAAGATAGATCTGATCTTTTGCCTGATTTAATCAAGACATTGAAAGCACTAAGGTTAAAAACATTAAAAGCTGAAATTACAACACTTGGTGGACGTGTTAGAAATGTGTTGTTTATAACTGGAGACGATTATTATTGTAATAATAATAATAATCGAGAGGTAGATACGTGTATAAGTGGAGACGATGAAGATACTGAGATGATGCAGCAACAACAACAACAACAACCACAGTATTGTATAAGTTCAATACAAGAAGCACTTAAAGCTGTGATGGAGAAATCAAGTGGTGATGATTCTGCTTCTACAAGTGTTAAGAGACAAAGAACTAACAATATCAACATCCTTTCTTAAATTACTTCTTTTCCCTTTTTATGTGTGTTTGTTTTTGTTTTTTTTTGGGGTGTGTGGTTTTTGTTTTTTGTCCATCTTATTTGGGCAGTATAATGTAGAGAGTTGGTGGTGTCTAGGGTTTTGGGTTAATTGTATGATGTGTGAGTTGCATATTGGAAAACCCTATCATAGATAAAACTCGAAATTCAGGTATTTAAGTGGAGAAGTATCTATAGAGGGTCAAATTTAGTATC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g009880.2.1SL2.50ch05:4100285..4103103301+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g009880.2SL2.50ch05:4099737..41033363,600+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g009880.2.1.1SL2.50ch05:4099737..4099855119+n/a
exonexon:Solyc05g009880.2.1.2SL2.50ch05:4100233..4100663431+n/a
exonexon:Solyc05g009880.2.1.3SL2.50ch05:4102579..4103336758+n/a
intronintron:Solyc05g009880.2.1.1SL2.50ch05:4099856..4100232n/a+n/a
intronintron:Solyc05g009880.2.1.2SL2.50ch05:4100664..4102578n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17817325%2Fdetails feature 17817325
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