Solanum lycopersicum mRNA Solyc05g010610.2.1

mRNA details  
Name
Solyc05g010610.2.1
Type
mRNA
Length
2,156
Organism
Solanum lycopersicum
Description
Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch05:4848664..4852023
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3360
Nb exon
8
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g010610.2.1 Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

TAGTTTTGAGTGAATCTTCTGGTAGACATAGTTTGTTCACCTGAAAAGTCTTGCTTTTTTGGATAGTTTGAACACATGTTTGGTTGTATGGTCTTTCTTGAGGATAGTTAAATGCATAAAGATGAAAACTTTAAGTTCCCAGCATGTTGAATTTCAATGTTTTAGGTTGTTTTCTTGATACTCAAGTGCTGTGGTAAAAGAAGTTTGGTTAAGTTTTTTCTATACTTGGAAAAATATGGATATAGAAATCAAGAATGACAGTGAACCAGAAAAGAGGAATGATCAAGAAGTGTCAATGAACTATCAGTCACCAAATGTTTCTTCAGAATGGCAATTAAATGGGAGTAATTTGACTAATTCATCAATGGGAATGGTGGATTCGTTTTGTCCTACTACTTGGGATCAGCCTACCACCAATTCATCAAATTTAGGCTTTTGTGATGCTAGTGTTCAAATGGATTTAGGACCTTTTAGAGCTGGTGTTGATAGTACACTTGGTCCTAATTGGACTCCATCAAATGCAGTGTTGAAAGGGGGTATGTTTCTACCTCCTGTTCCGATGATGCTTCCGCAAAGCTTAGCTCAGTTTCCGGCTGATTCGGGGTTTATTGAAAGAGCTGCAAGGTTTTCTTGCTTTAGTGGAGGGAACTTTGGTGATATGATGAACCCTTTTAGCATCCCCGAGTCGTCGATGAATCCTTATTATAGGGGATTGTCATCAATGCAGGGTCCTCAAGAGGTTTTGGCAAATAATGGGTTGAAATCACCTCAGAAGCTGCAGCATTTGAGTAATGTGGCTGAAAGTTCTAAGGATGTTTCTTTAACTCATAGGGACACACAAAGAAGTCCCCTCAAGAATGAGAAAAAGAGTGAAAATGTTGCTAAGTCTCAGGATGAAGCAAAAGAAGTTGCTGGAGTCTCTGGTAATGAGTCTGATGAAGCAGGATGTAGTGGCCGTCAAGAAGAAACTGAGGGTGCTGGTGAGGAGTCCTGTGGAAAGAATATTGGCTCAAAGAAAAGGAAAAGAGGTGGTCAGGATACTGAACCTGATCAAATGAAGGGAGCACAGCAGCCACCATCCGAAATTCAGAAAGGGGAACAGAACTTGAATCCAATTGCCAGCAAGCCTGGTGGAAAGAATGGTAAACAGGGGTCTCAGTTTTCAGATCCAACCAAAGAAGAATATATACATGTTCGTGCTCGAAGAGGCCAGGCAACAAATAGCCATAGTCTTGCAGAAAGAATAAGGAGGGAGAAAATCAGTGAACGGATGAAGTATCTTCAGGATCTTGTGCCTGGTTGCAACAAGGTCACCGGCAAAGCTGTGATGCTGGATGAAATCATTAACTATGTACAGTCTTTGCAAAGGCAGGTTGAGTTCCTCTCAATGAAGCTTGCAACAGTAAACCCGCGGCTTGATTTTGATATTGATGGTCTCCTGGCAAAAGATATCCTCCAGTCTCGAGCAGGTCCTTCATCCTCACTCGCTTTTCCGCCTGATATGACCATGGCATATTCTCCTTTACATCCACCGCAAGCTGGACTGCTTCAATCTGGTCTTCCTGGTTATGGATTTCCTAGTGAAGGATTTCGTAGAGCCATCAATCCTCATTTAGCCACTACTAGTTGTGGGCCTGGTGACTACAAGGATCCGTCATCTCAGGCACCGAATGAATGGGATAATGAACTACATAATATTGTCCAAATGGGGTTAAATTCAAGTGTACCTTCATCTAGTCAAGATTTAAGTGGTTCTCTACCAGCAGGACAAATGAAAGCAGAACCATGACTCATCATAGATACCAAATATGCTTAACTTTACCTGTTATTGGGAGATTAAGGTGCACTGATTATGTTATCTGGGAAGTGCGTTGCACCGAGAGCTCTTCTTATTTCACATTTGCACGAGACGCCCCATCCAGGAGTTCCCAGTAAGTCTGTACAGCAAATCCATAACGCGTATTTGTTGACACAGTGAATTCACCTCCTTTTCATAAGCGACACAATCGGCTTGTAGCACGAGAGTGATGATTCATTCCACGAGATTGATGTTCTTCAGATCAACAACAGCAAATGAAGGTTCAAGAACTAATGTTTTGTTGATACATTCTTGAATCTTACGTTGCGGAAATGCTTATATTCTTCCTGTTCATTCC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g010610.2.1SL2.50ch05:4848898..4851656518+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g010610.2SL2.50ch05:4848664..48520233,360+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g010610.2.1.1SL2.50ch05:4848664..48496991,036+n/a
exonexon:Solyc05g010610.2.1.2SL2.50ch05:4849980..4850186207+n/a
exonexon:Solyc05g010610.2.1.3SL2.50ch05:4850270..485033566+n/a
exonexon:Solyc05g010610.2.1.4SL2.50ch05:4850608..485067669+n/a
exonexon:Solyc05g010610.2.1.5SL2.50ch05:4850987..485105872+n/a
exonexon:Solyc05g010610.2.1.6SL2.50ch05:4851150..4851362213+n/a
exonexon:Solyc05g010610.2.1.7SL2.50ch05:4851453..485154088+n/a
exonexon:Solyc05g010610.2.1.8SL2.50ch05:4851619..4852023405+n/a
intronintron:Solyc05g010610.2.1.1SL2.50ch05:4849700..4849979n/a+n/a
intronintron:Solyc05g010610.2.1.2SL2.50ch05:4850187..4850269n/a+n/a
intronintron:Solyc05g010610.2.1.3SL2.50ch05:4850336..4850607n/a+n/a
intronintron:Solyc05g010610.2.1.4SL2.50ch05:4850677..4850986n/a+n/a
intronintron:Solyc05g010610.2.1.5SL2.50ch05:4851059..4851149n/a+n/a
intronintron:Solyc05g010610.2.1.6SL2.50ch05:4851363..4851452n/a+n/a
intronintron:Solyc05g010610.2.1.7SL2.50ch05:4851541..4851618n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17817999%2Fdetails feature 17817999
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