Solanum lycopersicum mRNA Solyc05g011810.2.1

mRNA details  
Name
Solyc05g011810.2.1
Type
mRNA
Length
1,317
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** B5AEK3_ORYSJ); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch05:5042653..5046761
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4109
Nb exon
7
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g011810.2.1 BHLH transcription factor (AHRD V1 *-** B5AEK3_ORYSJ); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGAAATCTGGAAAGGGTCATCATGTGGAAGAAGAAGAGGATGAGTATGATTTTGGTTCTAATAGAGATGCCACACCTTCAAGTAATAGTACTAAAGATGGGAAGAACAGTGACAAGGCAAATGCAATTAGGTCGAAGCATTCAGTAACTGAGCAGCGCCGGAGGAGCAAGATCAATGAGAGATTTCAGATGTTGAGAAATTTGATACCCCATACTGATCAAAAACGAGATACCGCGTCATTCTTGTTCGAGGTAATTCAGTACGTACAGTATTTACAGGATACAGTACAGAAGTATGAAGGATCATATCAACCTTGGAGCTCGGAGCCTACAAAACTTATGCCATGGAGAAACACTCAGTGGCGCGCGCAGAGTTTTCCTGCAAACCCTCAAGCCTTGAACAATGGTACTGACGCTGGACCAACATATTCAGGAAGGTTTGATGAGAATCTCTTAACCGTCACTTCGTCAATGCAAGCCAATCAGCGGAATCCACTTGAATCTCATTCTGGGGGTGATGTTAAATCTATGGATCAAGGAAAGGAACTAGCTAGAACGGCAATTGCAACATCGATGCCTCTTCAGGCTAGTATGCCAGTCCCTTTTCAGAACGATAGTGCCTTCTCTGACTCACTACCTACACCTGCTTCTGATGAATGCCCTAGAACCACTAATGCTCTGAATGATCAGGAGTTTATGGTAGAAGGCGGCACAATTAACTTTTCGAATACTTACTCTCAAGGGTTACTGAATTCGTTGACACACGCGCTACAGGCTACTGGCCTTGATCTTTCACAGGCCAGTATATCGGTGCAGATTAATCTAGGGAAGCGAGCAAACAAGGAAAGGGCCTTGGGGCCATCTGTTGCTAAGGATACAGAAAATCCTCCACCTGCACCTGGCGATCAATTTTTGGAGTTTCGAGATACAAACAATGGTGAAGAGTTGAACCAAGCTCAAAAGAGGCTGAAGAAATAGATACAACTATATAGCATGGCAATACCAAGTCAAATCAACTCAAGTTGGCATCACCTTCGCGTTAATCAGTTTGAGTGTATATCCCGCATTTTTTTATCAGTACCAAATGTTGCTCATATGTTCATAGCAATGCCTTTTGATGTCTTTCCTTTCTTTTTCCTCTTTATTTTATTTTATTTTTATTTTTTTGAATCTTTACGGGTGATACCCTCTTCCTTGTCTGTAGTTAAACTCGAATTCTATATGTTCTGAGTTTGTAAAGTCTCGATCTTGATGTATCTTGTGTAAAAATTTCACAAACACATTTGGTGATCTCGATTGTGTAATGTAAACAGGCCA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g011810.2.1SL2.50ch05:5042652..5046422326+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g011810.2SL2.50ch05:5042653..50467614,109+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g011810.2.1.1SL2.50ch05:5042653..504274997+n/a
exonexon:Solyc05g011810.2.1.2SL2.50ch05:5042917..504300185+2
exonexon:Solyc05g011810.2.1.3SL2.50ch05:5043759..504382870+1
exonexon:Solyc05g011810.2.1.4SL2.50ch05:5043908..504400396+n/a
exonexon:Solyc05g011810.2.1.5SL2.50ch05:5045007..5045401395+n/a
exonexon:Solyc05g011810.2.1.6SL2.50ch05:5046078..5046207130+1
exonexon:Solyc05g011810.2.1.7SL2.50ch05:5046318..5046761444+n/a
intronintron:Solyc05g011810.2.1.1SL2.50ch05:5042750..5042916n/a+n/a
intronintron:Solyc05g011810.2.1.2SL2.50ch05:5043002..5043758n/a+n/a
intronintron:Solyc05g011810.2.1.3SL2.50ch05:5043829..5043907n/a+n/a
intronintron:Solyc05g011810.2.1.4SL2.50ch05:5044004..5045006n/a+n/a
intronintron:Solyc05g011810.2.1.5SL2.50ch05:5045402..5046077n/a+n/a
intronintron:Solyc05g011810.2.1.6SL2.50ch05:5046208..5046317n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17818212%2Fdetails feature 17818212
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