Solanum lycopersicum mRNA Solyc05g011920.2.1

mRNA details  
Name
Solyc05g011920.2.1
Type
mRNA
Length
1,622
Organism
Solanum lycopersicum
Description
ACT domain-containing protein (AHRD V1 **-- D7M3X3_ARALY); contains Interpro domain(s) IPR002912 Amino acid-binding ACT
Location(s)
SL2.50ch05:5153637..5156871
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0008152
Length
3235
Nb exon
8
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g011920.2.1 ACT domain-containing protein (AHRD V1 **-- D7M3X3_ARALY); contains Interpro domain(s) IPR002912 Amino acid-binding ACT

ATGGAAGCTACAATGAGCTATTCCCAAAACATAATGGATGATGAGTATGAGAAATTTATCAGAAGAATGAATCCACCAAGAGTGGTAATTGACAATGAATCTTGCAAAAATGCCACTGTTATACAGGTGGATAGTGCTAACAAACATGGAATACTTCTTGAGGTGGTACAAATCCTTACTGATCTTAACTTTATCATTACAAAGGCTTATATTTGCTCTGATGGTGGATGGTTTATGGACGTATTCAATGTCACCAATCAAGAAGGAAACAAGATTACAGAAGAACCAATCTTGGATTATATCATGAAGTCTCTTGGTCCAGATTCTTGTTTTGCTTCTTCTATGAGAAGATCGGTTGGGGTTACTACGGGAATGGACCACACCTCAATTGAGTTAATTGGAAGTGATAGGCCAGGACTACTATCTGAAGTGAGTGCTGTCCTCACAAATCTTAGATGCAATGTGGTGAATGCTGAAGTGTGGACGCATAACACGCGAGCAGCAGCTATAATGCAAGTTACTGATGACGAAACCGGGGGTGCAATTGCTGACGCTGAAAAGTTGTCTATGATCAAGAAACTATTATGCAATGTACTTAGAGGTAGCAATAAATCAAGAGATGCTAAGACATTGTTATCTCATGGGGTCACTCATACTGATAGAAGGCTTCACCAGCTGATGTTTGCAGACCGTGATTATGAACGTGCCACTGGTGACGGATCGGATGATAAAGAAAGGCCCAATGTAAACGTTGTTAATTGGCAAGACAAGGACTACTCAGTAGTGACAATTCGGTGCAAGGATAGACCAAAACTTCTGTTTGATACGATTTGTACTTTGACTGATATGCAGTATGTGGTTTTCCATGGCAATGTCGATACTGAAGGACCAGAAGCTTACCAGGAATACTGCATTAGGCATATCGACGGATCCCCTGTGAAGTCAGATGCAGAAAGACAGAGAGTGATTCAATGTCTTGAAGCAGCAATAGAAAGACGAGTATCCGAGGGGTTGAAGCTAGAACTATGTACTACGGACCGAGTAGGGCTGCTGTCCAACGTTACCAGAATCTTCCGCGAGAACAGCCTTACTGTCACTCGAGCAGAAGTGTCAACAAGAGCAGGCAAAGCCTTGAATACATTCTATGTTCGCGATTCATCAGGGTACCCTGTCGATACTAAGATCATAGAATCAGTTCGACAAACAATTGGCCAAACGATACTTCGAGTGAAAGGCTCCCCTGAAGAGTTGAATCCAGTACAACAAGAATCTCCAACTAGGTTCCTCTTTGGGGGCTTGTTCAAGTCCAGATCCTTTTGTAATTTCGGTTCGGTTCGATCCTACTCTTGAATGGAAAACTCACTAGAGTCCTCTTTCCATTGTATATATTTCCCAGGTTTTAGCCCTTTAGGTATGGTTAATTAGCAAAAGTTGATTACTTACCTAAGTGTTTGTAAATATTACATTCTTGATCACATTTTGCTCTTTTCATTGGTAATGGATTCAACACAATGTTGACCAATTTGAAGCAAATTGAAAATCCAAGAATCATGTCGTTTTCAGACTCTACTTGTGAGATTTTACTGTGGCCATTTGGCCATTTGAAGTATGTTTGACTTGAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g011920.2.1SL2.50ch05:5153636..5156599450+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g011920.2SL2.50ch05:5153637..51568713,235+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g011920.2.1.1SL2.50ch05:5153637..51536404+n/a
exonexon:Solyc05g011920.2.1.2SL2.50ch05:5154630..515470576+2
exonexon:Solyc05g011920.2.1.3SL2.50ch05:5154798..515484346+1
exonexon:Solyc05g011920.2.1.4SL2.50ch05:5154942..5155056115+n/a
exonexon:Solyc05g011920.2.1.5SL2.50ch05:5155169..515523668+2
exonexon:Solyc05g011920.2.1.6SL2.50ch05:5155347..5155940594+n/a
exonexon:Solyc05g011920.2.1.7SL2.50ch05:5156062..5156166105+n/a
exonexon:Solyc05g011920.2.1.8SL2.50ch05:5156258..5156871614+n/a
intronintron:Solyc05g011920.2.1.1SL2.50ch05:5153641..5154629n/a+n/a
intronintron:Solyc05g011920.2.1.2SL2.50ch05:5154706..5154797n/a+n/a
intronintron:Solyc05g011920.2.1.3SL2.50ch05:5154844..5154941n/a+n/a
intronintron:Solyc05g011920.2.1.4SL2.50ch05:5155057..5155168n/a+n/a
intronintron:Solyc05g011920.2.1.5SL2.50ch05:5155237..5155346n/a+n/a
intronintron:Solyc05g011920.2.1.6SL2.50ch05:5155941..5156061n/a+n/a
intronintron:Solyc05g011920.2.1.7SL2.50ch05:5156167..5156257n/a+n/a
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Related viewsNone found
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