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Solanum lycopersicum mRNA Solyc05g012020.2.1

mRNA details  
Name
Solyc05g012020.2.1
Type
mRNA
Length
1,203
Organism
Solanum lycopersicum
Description
Ripening Inhibitor (RIN) MADS-box transcription factor MADS-MC (AHRD V1 *-** Q8S4L5_SOLLC); contains Interpro domain(s) IPR002487 Transcription factor, K-box
Location(s)
SL2.50ch05:5225203..5230962
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
5760
Nb exon
8
Sifter term
  • GO:0003700
  • GO:0046982
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g012020.2.1 Ripening Inhibitor (RIN) MADS-box transcription factor MADS-MC (AHRD V1 *-** Q8S4L5_SOLLC); contains Interpro domain(s) IPR002487 Transcription factor, K-box

TCATGATATATAGTAAAACAAAAAAGTCTTTATTCTCTTTTCTTCTTGACTAGGGAACCATTAGATTTTAAAGACATTAAATCTATTACCCTTACCCTAAGAATAAGAAGATGTAAAGTAGAAGAGAAAACAACCAAAACCATATATATACATATATATAATTACATTATATTGTCTTATAACATATAGTCTTTTAAGGAAAAACAAATTTAGAAAAAAATAATATTATTTTACATTTTTTTTCTTCATACAATATGGGTAGAGGGAAAGTAGAATTGAAGAGAATTGAGAACAAAATAAATAGACAAGTTACCTTTGCAAAGAGAAGAAATGGACTCCTAAAGAAAGCTTATGAACTTTCTATACTTTGTGATGCTGAAATTGCTCTTATTATTTTCTCTAGTCGTGGCAAGCTTTATGAATTTTGCAGCAATTCAAGTATGTCCAAGACATTGGAGAGATACCACAGATACAATTATGGTACACTTGAAGGAACCCAAACTTCATCAGATTCACAGAACAACTACCAAGAGTATTTGAAGCTTAAAACAAGAGTGGAAATGTTACAACAGTCTCAAAGGCATTTGCTAGGTGAGGATTTGGGACAATTGGGCACAAAAGACTTGGAACAGCTTGAACGTCAATTGGATTCATCATTGAGGCAAATTAGGTCAACAAAGACACAACACATTCTTGATCAACTTGCTGAACTTCAACAAAAGGAACAATCTCTTACTGAAATGAACAAATCTTTGAGAATAAAGTTGGAAGAACTTGGTGTTACCTTTCAAACATCATGGCATTGTGGTGAGCAAAGTGTACAATATAGACATGAACAGCCTTCTCATCATGAGGGATTTTTTCAACATGTAAATTGCAATAATACATTGCCTATAAGTTACGGATACGATAATGTACAACCCGAAAATGCAGCACCATCAACACATGATGCTACTGGAGTTGTACCTGGATGGATGCTTTGAATTTGGAGTATATGGAGAGAAAAAATCCTCTTAGTTATACAAGTTATTTATTTTTATTAAAAAAATAAGTTAGATGGAGAATTATATATATCATACTTTAAAGAACTTATATTGTTTGAATGTTTTAGCTAGCAAACACTTTGGATTATATATAATATTGTGATATATTTATTGTCAAGAAGAGTATGGCAATATTGATAACACTATATTTTTGAATTAC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g012020.2.1SL2.50ch05:5225422..5230708243-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g012020.2SL2.50ch05:5225203..52309625,760-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g012020.2.1.1SL2.50ch05:5230524..5230962439-1
exonexon:Solyc05g012020.2.1.2SL2.50ch05:5227571..522764979-n/a
exonexon:Solyc05g012020.2.1.3SL2.50ch05:5226995..522705662-1
exonexon:Solyc05g012020.2.1.4SL2.50ch05:5226669..5226768100-n/a
exonexon:Solyc05g012020.2.1.5SL2.50ch05:5226486..522652742-n/a
exonexon:Solyc05g012020.2.1.6SL2.50ch05:5226345..522638642-n/a
exonexon:Solyc05g012020.2.1.7SL2.50ch05:5225922..5226055134-1
exonexon:Solyc05g012020.2.1.8SL2.50ch05:5225203..5225507305-n/a
intronintron:Solyc05g012020.2.1.2SL2.50ch05:5227650..5230523n/a-n/a
intronintron:Solyc05g012020.2.1.3SL2.50ch05:5227057..5227570n/a-n/a
intronintron:Solyc05g012020.2.1.4SL2.50ch05:5226769..5226994n/a-n/a
intronintron:Solyc05g012020.2.1.5SL2.50ch05:5226528..5226668n/a-n/a
intronintron:Solyc05g012020.2.1.6SL2.50ch05:5226387..5226485n/a-n/a
intronintron:Solyc05g012020.2.1.7SL2.50ch05:5226056..5226344n/a-n/a
intronintron:Solyc05g012020.2.1.8SL2.50ch05:5225508..5225921n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17818438%2Fdetails feature 17818438
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