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Solanum lycopersicum mRNA Solyc05g013790.2.1

mRNA details  
Name Type Length
2,293
Organism
Description
Nucleoporin GLE1 (AHRD V1 *-*- C0H9R7_SALSA); contains Interpro domain(s) IPR012476 GLE1-like
Location(s)
SL2.50ch05:7100783..7110858
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005643
Length
10076
Nb exon
15
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g013790.2.1 Nucleoporin GLE1 (AHRD V1 *-*- C0H9R7_SALSA); contains Interpro domain(s) IPR012476 GLE1-like

AAGAACTAGTTTATTCAAAAAAAATGGGTGCTGTTAAACTGCAACTCCCGTTGCCTAAAAGTGTTGATGGAGTCACCCTGGATCCAAATCCTGATTGGACCTTTGATGCTTTATTGGTTGAGCTCAATTCGATTGAGAAGAAGCTCAATCCATCATCAAAATTTCCAATACCTTTTACGAAAACAGAATCTCGACAACTCTCGGCTTCGAAGGATAATTCTCGGAGAGGCTTTGTTATGCAAGTGTCTGATGACGACGTGGAGGATATGGACAGAGATACTAAGCATGAAGTTGGTGATCATTTACTTATGGGAGGAAAACGGTTTGCCTGTCACGAAATCTATCTGAGTGATAGCGACCAATCTGAAGAAGGCCTAAACATCGAACTTCAAGATGATCTAATGGATAAAGTGGGATTAGTGGAAAGTGCTTTATCTGAGTTAGCTCATGACCATCAGCTTACTATTGCGGAGGAAATGAGAGATCAACTATCAGTACTTGAAGCCGAGTTGACGGATGAAAGTGAGAAGCTTGCCTCCATACTAGAACGAGTTGAGAGAAACACTGAAGCTCAAAGGGAAATGAACAGAAAATTCGACATGCAGTACCAACGTAAAATTGCAGAAGCCCTTGATGATCACCTAACTACGGTACAAAGGGATCACGAACACAGATCCCAAATTGAAGAAAGGAGAATAAGAGATGATGCAGCTCGTGAAGAGGCCAAGAGGAAAGAAAAAGCTCTTCATGAAGAAAAAGCCCGGCAAGAAAGGATCAGAGCAGAAACCAAGGTGCAAGCTAGGCTGGAAGCTGAAAGAGTTGAAAAGGAAAAAGCTGCTGCGCTGGAAGCTGAAAGAGTTGAAAAGGAAAAAGCTGCTGCGCTGGAAGCTGAGAGAAAAGCAGCAAAAGAAGCTGCAGCTGCGTCAGATAAGAAGTCATCTGAGTCAGTGATGACTGCTTCTCCAGAGGCTAGCAAGGTTTCAAGGGATGTCACTAGTCAGCCTGCGAGACCCATATCTGATGGGCAGAAACATTCAACAGGAAATACAATCAGGGTGACAGAAAATGCTCAAAAACTGGAGGAGAAAAGATTGTCCGTTTACAATGAAATAGCTGCGCAGAATGACGCACTGGGATTGGGTTCAAACAAGGCTTACCGAAAGTTTGAAATGGAAATAGCCAGACGAATCAGAACTATCACTGGTTCAAAAGAAAATGTCAGAGTGAAAGCAGATGAATTAATTAAGCTAATTAGTGGTTCAACATGTCCACAATCCATCAGCATTGCAATGTTCGCACAGAAGGTGGTGTCCCTGTGTGTGAAGCCTACAGGAAGCTTTAACAGTGCAGTCTATGCTTATGGTCGTGTAATTGTCCATGTTACATCAAAGGTCCCTCTTGCCATGGAAATTCTCATAGCTGAGTTGAACAAAGTTTGCATTTACACAGTTCCTAAGTACATTATGTACTCAGAGGCAGCCTTCCAGACTAAAGAAGCTTACTACAAAGCTATTGGCTATGCAGAGGAAGATGGGAAGATAGAAAGTACTGATAGTTATGTGGATCGCTTAAGTGCATGCATGAAATTATATGGTGCACTTGTTCAGACTGAAGTTGACGGCTGCCAAAACTTGCATGGGATCAGAGAAGGTTGGGCATGGATAGCCAGATTCTTAAATGTTTTTCCTGCAAATTTATACACCGCAGCTGCATTGCAGGCTTTTCTTGAAATGGCAGGTTTTGCTCTACACAAAAGATATAAGACACAATTCAGAAAGCTGCTGGATATTATTACTAGAGATTTTCTAACTGCATTGAAAGATCGAGGTGATGCAAAGTTGGTCAAAGTGATTGTGAGTCTCCGGAGTTATATAGAGTCAAATCAGTTCCTGAATGAACCTGAGGGCTGGCGCCTCAGGAGTTCCTTGGAATCACACAATTTCGCTCCAGATTCAGATCATGATCAACAGTATCATTACCAACAGAATAGATTCTATTAGACTATTACTAGATCTACAAAGAAGGAATCGATTCTTTTTTCCTTCAGTTACTGGAAATTTTATTCAAATCAGCTGATATCAATGAGATGCTTTCTTCTCAGAATCTGAATATGTAACTGCACCTGTATTAGTTGTATACCGTTAATTATGATAAAAGGAAATATGTAATTGCTCTTGTATCAGTTTTTGGTTGATTCTGAACCAGATTACATATGGATTCTTGTAACTTGGAAAAGGCCAGTGTTGTCAATTTCAATGGACCTTGCCTGCAAAGTGTAAGCCAGCCTTATTCA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g013790.2.1SL2.50ch05:7101075..7110345578-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g013790.2SL2.50ch05:7100783..711085810,076-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g013790.2.1.1SL2.50ch05:7110834..711085825-n/a
exonexon:Solyc05g013790.2.1.10SL2.50ch05:7104640..710472182-n/a
exonexon:Solyc05g013790.2.1.11SL2.50ch05:7104284..710437087-n/a
exonexon:Solyc05g013790.2.1.12SL2.50ch05:7103083..710316684-n/a
exonexon:Solyc05g013790.2.1.13SL2.50ch05:7102722..7102853132-n/a
exonexon:Solyc05g013790.2.1.14SL2.50ch05:7101430..7101552123-n/a
exonexon:Solyc05g013790.2.1.15SL2.50ch05:7100783..7101345563-n/a
exonexon:Solyc05g013790.2.1.2SL2.50ch05:7110488..7110655168-n/a
exonexon:Solyc05g013790.2.1.3SL2.50ch05:7110263..7110418156-1
exonexon:Solyc05g013790.2.1.4SL2.50ch05:7109690..7109810121-n/a
exonexon:Solyc05g013790.2.1.5SL2.50ch05:7109423..7109571149-1
exonexon:Solyc05g013790.2.1.6SL2.50ch05:7108827..7108998172-n/a
exonexon:Solyc05g013790.2.1.7SL2.50ch05:7108182..7108431250-2
exonexon:Solyc05g013790.2.1.8SL2.50ch05:7106065..7106174110-n/a
exonexon:Solyc05g013790.2.1.9SL2.50ch05:7104926..710499671-1
intronintron:Solyc05g013790.2.1.10SL2.50ch05:7104722..7104925n/a-n/a
intronintron:Solyc05g013790.2.1.11SL2.50ch05:7104371..7104639n/a-n/a
intronintron:Solyc05g013790.2.1.12SL2.50ch05:7103167..7104283n/a-n/a
intronintron:Solyc05g013790.2.1.13SL2.50ch05:7102854..7103082n/a-n/a
intronintron:Solyc05g013790.2.1.14SL2.50ch05:7101553..7102721n/a-n/a
intronintron:Solyc05g013790.2.1.15SL2.50ch05:7101346..7101429n/a-n/a
intronintron:Solyc05g013790.2.1.2SL2.50ch05:7110656..7110833n/a-n/a
intronintron:Solyc05g013790.2.1.3SL2.50ch05:7110419..7110487n/a-n/a
intronintron:Solyc05g013790.2.1.4SL2.50ch05:7109811..7110262n/a-n/a
intronintron:Solyc05g013790.2.1.5SL2.50ch05:7109572..7109689n/a-n/a
intronintron:Solyc05g013790.2.1.6SL2.50ch05:7108999..7109422n/a-n/a
intronintron:Solyc05g013790.2.1.7SL2.50ch05:7108432..7108826n/a-n/a
intronintron:Solyc05g013790.2.1.8SL2.50ch05:7106175..7108181n/a-n/a
intronintron:Solyc05g013790.2.1.9SL2.50ch05:7104997..7106064n/a-n/a
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