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Solanum lycopersicum mRNA Solyc05g014000.2.1

mRNA details  
Name
Solyc05g014000.2.1
Type
mRNA
Length
1,522
Organism
Solanum lycopersicum
Description
Pectate lyase (AHRD V1 **** D3IZZ1_GOSHE); contains Interpro domain(s) IPR002022 Pectate lyase/Amb allergen
Location(s)
SL2.50ch05:7501147..7503953
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
2807
Nb exon
5
Sifter term
GO:0016829
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g014000.2.1 Pectate lyase (AHRD V1 **** D3IZZ1_GOSHE); contains Interpro domain(s) IPR002022 Pectate lyase/Amb allergen

CCCTTCATTCCAAACTCCATTATTTTCTCTTCCCTTAACAACACAAAGGGGATTTCAAATGGGAATGCCACTTTCTTTTCTTCTCCTTCTTACTCTATTATCTCCTATCTTCACATTCTCCTCTCATGTTCCTGACCCTGAAGTTATAGTCCAACAAGTTAATGAGAAAATCAATGCATCAAGAAGGAACTTAGGTTATTTATCATGTGGAACAGGCAATCCAATTGATGATTGTTGGCGATGTGATCCTAATTGGGAAAAAAACAGACAAAGACTAGCTGATTGTGCAATTGGCTTTGGTAAACAAGCAATTGGTGGTAAAGATGGTAAAATCTACGTAGTTACTGACACTAGTGATGATCCAGTAAATCCAAAGCCAGGAACATTAAGATATGGTGCAATTCAAGATGAACCACTTTGGATTATATTTTCTAGAGATATGGTTATTAAGTTAAAAGAAGAATTAATGTTGAATTCATTTAAGACAATTGATGGTAGAGGTGCTAGTGTACATATTGCTGGTGGTCCATGTATAACTATACAATATGTTACAAATATTATAATACATGGATTAAATATTCATGATTGTAAACAAGGTGGAAATGCTTATGTTAGAGATTCACCACAACATTATGGTTGGAGAACAATATCAGATGGAGATGGTGTTTCTATATTTGGTGGAAGTCATGTTTGGGTGGACCATTGTTCTTTGTCAAATTGTAATGATGGTTTGATTGATGCAATTCGTGGTTCTACTGCCATTACTATTTCCAATAATTATATGACACATCACAACAAGGTAATGCTTTTGGGACATAGTGATTCATTCACTAGAGACAAGAATATGCAAGTTACCATTGCTTTTAATCATTTTGGTGAAGGGCTTGTGCAAAGGATGCCAAGATGTAGACATGGATATTTCCATGTGGTGAATAATGACTACACTCATTGGGAGATGTATGCAATTGGAGGAAGTGCTTCTCCAACTATCAATAGTCAAGGCAATAGATTCCTTGCTCCTAATGATATCTTCAACAAGGAGGTGACAAAACATGAGGATGCAGCAGAAAGTGAATGGAAGAATTGGAATTGGAGATCAGAAGGTGATTTAATGCTTAATGGAGCATTTTTCATAAGATCTGGTGCTGGAGCTTCTTCAAGTTATGCAAAAGCATCAAGTTTAAGTGCAAGGCCATCTACTTTGGTTAATTCTATTACAATGAATGCTGGTGCACTTGGTTGCAAAAAGGGCAAAAGATGTTGATTAATATGTATATGATTATTAATAATTTTAATTAGCACTATATGTTCTCTTTTTTAAGTGTATTGTTGAGAAATTGTGAAATATTATAATCTCTCAGTTAATTATATACCATGTAGTATATATAAAAAAAAATGGATGATGAAGGACAGGTTGATGAGTTTGTAACTTGACTTCCCCTCTCATTGTAATGTTATGTGATAATCAAGGATCAAGTGTGAATACTACTACCACATTTCAACTAGAAATTATTTTGCCCTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g014000.2.1SL2.50ch05:7501404..7503895402-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g014000.2SL2.50ch05:7501147..75039532,807-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g014000.2.1.1SL2.50ch05:7503789..7503953165-1
exonexon:Solyc05g014000.2.1.2SL2.50ch05:7502617..7503250634-n/a
exonexon:Solyc05g014000.2.1.3SL2.50ch05:7502383..7502486104-1
exonexon:Solyc05g014000.2.1.4SL2.50ch05:7502148..7502286139-n/a
exonexon:Solyc05g014000.2.1.5SL2.50ch05:7501147..7501626480-n/a
intronintron:Solyc05g014000.2.1.2SL2.50ch05:7503251..7503788n/a-n/a
intronintron:Solyc05g014000.2.1.3SL2.50ch05:7502487..7502616n/a-n/a
intronintron:Solyc05g014000.2.1.4SL2.50ch05:7502287..7502382n/a-n/a
intronintron:Solyc05g014000.2.1.5SL2.50ch05:7501627..7502147n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17820584%2Fdetails feature 17820584
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