Solanum lycopersicum mRNA Solyc05g014160.2.1
 mRNA details
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| Name | Type |
Length
1,610
|
Organism |
|
Description
Genomic DNA chromosome 3 P1 clone MPE11 (AHRD V1 **-- Q9LU81_ARATH); contains Interpro domain(s) IPR000342 Regulator of G protein signalling
|
|
Location(s)
SL2.50ch05:7895688..7906289
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0004871
- Length
- 10602
- Nb exon
- 12
- Sifter term
- GO:0005515
- GO:0004930
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc05g014160.2.1 Genomic DNA chromosome 3 P1 clone MPE11 (AHRD V1 **-- Q9LU81_ARATH); contains Interpro domain(s) IPR000342 Regulator of G protein signalling
ATGGATCACCAGACCACTCTTCCGAAGCTCTTATACATACTGCGGCAGAAACGACTTCTATTGAAAGCGACATTACCTTACATGATTCACAAGATTCCTAGGTCCAAAGGCAGTAGCTTTTGGCTAGTGGCAATTCAAGTTATTGCAAGCTTAAATCTATTGTTGTCGATAGTGATGGCTCTCAATTTTCTGAAGTTCAGAAAGAGACATTGGTGGAGGTCATGCTATCTTTGGGCAGTCTGGATTGAAGGTCCACTGGGATTTGGTTTGCTGTTGAGCTGCCGTATTACACAGATATTCCAACTTTATTATATATTTGTGAAGAGACGTCTGCCACCACTTAGATCCTATATTTTTCTTCTGCTGATTCTCTTGCCATGGATAGCTCTTGCTGCAGTTATTCAGATAAAAAAGCCTCTGAACGACCGGTGCCACATGGGGACGCTGTGGATCATCATTGTTATGGGCCTTCATGCATTATATGTTGTAGCTTTGATTGCTTTTGCTGGGGCTGTGCATCATGTGGAATTCAGATTTCATGAACTCAAAGACCTTTGGAGAGGAATTCTTGTCTCTTCAGCTTCCATTGGAATATGGGTGGCTGCTTATGTAATGAATGAGGTTCGCGAAGATATATCATCGCTAGAAATTGCCTCAAGATTCTTATTATTGGTTATGACAAGTGTCCTTGTACTGGCATTCTTCTCTTTCTCGATTTCTCAACCTCTTGTCTCAGTTATGAGCTTGAGGAAGAAGAATCAGAAAGAATACAAGACAATGAGTCAGGCATTAGGTATACCTGATAGTGGGATCCTATTACAGAGGGAATCGACAAGCATTCTAGATCCTAATGAACCTTTGGAAAAGCTCCTGCTGAATCGAAGGTTCCGTCAGTCCTTCATGGAATTTGCAGACAGTTGTCTGGCTGGAGAGAGTGTGCACTTCTATGATGAAGTGCAACATTTTGATAAAATTCCTATTCAGGATTCAGTTAGGAGAATTTACATGGCACGCCACATAATAGAGAAGTATATTGCTGCAGGAGCACCAATGGAGGTGAACATTTCTCACCGAATCCGGCAGGAAATTTTGAATACTAATGATCTCTCCCACACTGACCTATTCAAAAACGCTCTAGGTGAACTGATGCAGCTGATGAAACTGAACTTAGCAAGAGATTACTGGTCGTCAATGTACTTCATGAAGCTGCAAGAGGATATCCGCATGAGAGCAGTTGATCCGGAGATGGAACATGCTAGTGGTTGGAATTTTTCCCCAAGATTGAGTTCTGTCCATTGCAGTGATGACCCTTTCCAGAATGAACATACAGAACTGATGGGCTCCAGCTACCTGATTCTCCTGTTCATAAACGATACGAGCCTTCAAGACCAAATTTTGCTGTGTGATGTTGCACCTCATGCTTTGCAGACCTGAAGGAGCAATGCCAAGACCATGGTATGTGAAAGAACAGGGCAGACTGAAAGTGGGCTTCTAGTTTTCAAATTTGTGGGTGGCAATTCATGCTGGCAGGTAGATTTAACAAATGCATACTTTTGTATGTAATTGGAACTTCATAGGTATATCTTACTGTACTTGTTATATAAATCAAC
ATGGATCACCAGACCACTCTTCCGAAGCTCTTATACATACTGCGGCAGAAACGACTTCTATTGAAAGCGACATTACCTTACATGATTCACAAGATTCCTAGGTCCAAAGGCAGTAGCTTTTGGCTAGTGGCAATTCAAGTTATTGCAAGCTTAAATCTATTGTTGTCGATAGTGATGGCTCTCAATTTTCTGAAGTTCAGAAAGAGACATTGGTGGAGGTCATGCTATCTTTGGGCAGTCTGGATTGAAGGTCCACTGGGATTTGGTTTGCTGTTGAGCTGCCGTATTACACAGATATTCCAACTTTATTATATATTTGTGAAGAGACGTCTGCCACCACTTAGATCCTATATTTTTCTTCTGCTGATTCTCTTGCCATGGATAGCTCTTGCTGCAGTTATTCAGATAAAAAAGCCTCTGAACGACCGGTGCCACATGGGGACGCTGTGGATCATCATTGTTATGGGCCTTCATGCATTATATGTTGTAGCTTTGATTGCTTTTGCTGGGGCTGTGCATCATGTGGAATTCAGATTTCATGAACTCAAAGACCTTTGGAGAGGAATTCTTGTCTCTTCAGCTTCCATTGGAATATGGGTGGCTGCTTATGTAATGAATGAGGTTCGCGAAGATATATCATCGCTAGAAATTGCCTCAAGATTCTTATTATTGGTTATGACAAGTGTCCTTGTACTGGCATTCTTCTCTTTCTCGATTTCTCAACCTCTTGTCTCAGTTATGAGCTTGAGGAAGAAGAATCAGAAAGAATACAAGACAATGAGTCAGGCATTAGGTATACCTGATAGTGGGATCCTATTACAGAGGGAATCGACAAGCATTCTAGATCCTAATGAACCTTTGGAAAAGCTCCTGCTGAATCGAAGGTTCCGTCAGTCCTTCATGGAATTTGCAGACAGTTGTCTGGCTGGAGAGAGTGTGCACTTCTATGATGAAGTGCAACATTTTGATAAAATTCCTATTCAGGATTCAGTTAGGAGAATTTACATGGCACGCCACATAATAGAGAAGTATATTGCTGCAGGAGCACCAATGGAGGTGAACATTTCTCACCGAATCCGGCAGGAAATTTTGAATACTAATGATCTCTCCCACACTGACCTATTCAAAAACGCTCTAGGTGAACTGATGCAGCTGATGAAACTGAACTTAGCAAGAGATTACTGGTCGTCAATGTACTTCATGAAGCTGCAAGAGGATATCCGCATGAGAGCAGTTGATCCGGAGATGGAACATGCTAGTGGTTGGAATTTTTCCCCAAGATTGAGTTCTGTCCATTGCAGTGATGACCCTTTCCAGAATGAACATACAGAACTGATGGGCTCCAGCTACCTGATTCTCCTGTTCATAAACGATACGAGCCTTCAAGACCAAATTTTGCTGTGTGATGTTGCACCTCATGCTTTGCAGACCTGAAGGAGCAATGCCAAGACCATGGTATGTGAAAGAACAGGGCAGACTGAAAGTGGGCTTCTAGTTTTCAAATTTGTGGGTGGCAATTCATGCTGGCAGGTAGATTTAACAAATGCATACTTTTGTATGTAATTGGAACTTCATAGGTATATCTTACTGTACTTGTTATATAAATCAAC
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc05g014160.2.1 | SL2.50ch05:7895863..7906289 | 478 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc05g014160.2 | SL2.50ch05:7895688..7906289 | 10,602 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc05g014160.2.1.1 | SL2.50ch05:7906237..7906289 | 53 | - | 1 |
| exon | exon:Solyc05g014160.2.1.10 | SL2.50ch05:7896399..7896520 | 122 | - | n/a |
| exon | exon:Solyc05g014160.2.1.11 | SL2.50ch05:7896080..7896249 | 170 | - | 1 |
| exon | exon:Solyc05g014160.2.1.12 | SL2.50ch05:7895688..7895963 | 276 | - | n/a |
| exon | exon:Solyc05g014160.2.1.2 | SL2.50ch05:7905558..7905678 | 121 | - | n/a |
| exon | exon:Solyc05g014160.2.1.3 | SL2.50ch05:7905085..7905148 | 64 | - | 2 |
| exon | exon:Solyc05g014160.2.1.4 | SL2.50ch05:7904888..7904972 | 85 | - | 1 |
| exon | exon:Solyc05g014160.2.1.5 | SL2.50ch05:7904248..7904321 | 74 | - | 2 |
| exon | exon:Solyc05g014160.2.1.6 | SL2.50ch05:7899828..7900019 | 192 | - | 2 |
| exon | exon:Solyc05g014160.2.1.7 | SL2.50ch05:7897464..7897552 | 89 | - | n/a |
| exon | exon:Solyc05g014160.2.1.8 | SL2.50ch05:7897132..7897370 | 239 | - | 1 |
| exon | exon:Solyc05g014160.2.1.9 | SL2.50ch05:7896726..7896850 | 125 | - | 2 |
| intron | intron:Solyc05g014160.2.1.10 | SL2.50ch05:7896521..7896725 | n/a | - | n/a |
| intron | intron:Solyc05g014160.2.1.11 | SL2.50ch05:7896250..7896398 | n/a | - | n/a |
| intron | intron:Solyc05g014160.2.1.12 | SL2.50ch05:7895964..7896079 | n/a | - | n/a |
| intron | intron:Solyc05g014160.2.1.2 | SL2.50ch05:7905679..7906236 | n/a | - | n/a |
| intron | intron:Solyc05g014160.2.1.3 | SL2.50ch05:7905149..7905557 | n/a | - | n/a |
| intron | intron:Solyc05g014160.2.1.4 | SL2.50ch05:7904973..7905084 | n/a | - | n/a |
| intron | intron:Solyc05g014160.2.1.5 | SL2.50ch05:7904322..7904887 | n/a | - | n/a |
| intron | intron:Solyc05g014160.2.1.6 | SL2.50ch05:7900020..7904247 | n/a | - | n/a |
| intron | intron:Solyc05g014160.2.1.7 | SL2.50ch05:7897553..7899827 | n/a | - | n/a |
| intron | intron:Solyc05g014160.2.1.8 | SL2.50ch05:7897371..7897463 | n/a | - | n/a |
| intron | intron:Solyc05g014160.2.1.9 | SL2.50ch05:7896851..7897131 | n/a | - | n/a |
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