Notice: Due to a wide-spread power outage in the area, SGN was unavailable early on Sunday. We apologize for the inconvenience.

Solanum lycopersicum mRNA Solyc05g014690.1.1

mRNA details  
Name
Solyc05g014690.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc05g014690.1.1
Length
3,009
  
Description
ATP-dependent DNA helicase (AHRD V1 *-** A0Y2E9_9GAMM); contains Interpro domain(s) IPR004589 DNA helicase, ATP-dependent, RecQ type
Location(s)
SL2.50ch05:8814439..8825664
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006310
  • GO:0008026
  • GO:0005524
Length
11226
Nb exon
20
Sifter term
  • GO:0000739
  • GO:0005524
  • GO:0000405
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g014690.1.1 ATP-dependent DNA helicase (AHRD V1 *-** A0Y2E9_9GAMM); contains Interpro domain(s) IPR004589 DNA helicase, ATP-dependent, RecQ type

ATGGATTCCGACGCTGATTCCGATGGCTCTCACGTATCCTCAACACCACCACGTCACCCTCTTCCACCTCCACAGTTCCCGTCGCGCCGTGCTCTTCTTGCTACTGCCAAATCAAGAACTCAACCCAAAAACACCTCTACCATTTCCTCAAAATTTTCCCGCCCAATGCTAAGACCAAAAATCTCAACCAAAAAACCCAAAAAATCCAAGGACGATACCACCATTCAAACCCGACAGAATCTCTCCGATTTACCGGTCCACATTCACCCAAACGACACCGTTTCTAGTGAAGCTCCACCTTCTGGAGGCTCATGTAATTCGAAATTTGCGTCCTCTTCTAAAACCCAGGAAACCCGAATTCAAAATCCATCATCCCCACCAAAATCCTCCGATTTGCCATTCCAAATCCACCGTTCGGTAAATGCCGTTTTGTCCCATGACAATAGTTCCGGTGAAGTTCTTCCTGCAAGTGGCTTGTGCTTACCGAAATTTGCTTCATTTTTGAAAACCCGCAAAACAATTCTCAATTTTGAGCCTGTCGAAGCTGGTTCTATTGACCCCCAGTTGGTCCAAGTGAATGAAAAGGAAGCAGTTGATTCGTGTTGTCGGGCGAAAGCTGTGAGGAAATATCCTAATTTAATAGGGAGCAATGTGTCGTCTTTGTCTTCATTGCCGGTAAAGAAGGTTAAATGTGCTAATGAAGGTAACTTTGTAAGGCTGAACATAAATGGTTATGGTAAAAAGTTTGCATCCAAATTCAAAAGAAGGAATTTTAATTCATCAAGTGGTAAAAAGTTCTACAGGAGATGGAAAAAGAAAGTTAGGGTTGAAGGTAAGGAGGGGGAAAATGGCTTGTTTGATGAAGAAGGTTTAGTTGTGGAAGTTAAGGGAAGAGGGGAAAGATTGGGTTTTGATGCAGAGTTGATTGAAGAAGCTGTGATGGGAGTTAGAAATGAGGCGTCAGATGAGAATTTGTTGAGGTTGTTGAAACTCACTTATGGGTATGATTCATTTAGAGATGGGCAGTTGGAGACACTCAAGATGGTGCTTTCAGGGAAATCTACAATGTTGGTTTTGCCAACAGGTGCTGGGAAGTCGCTGTGTTATCAGTTGCCAGCAATGGTTTTGCAGGGAGTTACCGTCGTTATTAGCCCCTTGGTTTCCTTGATGATTGATCAGTTAAAGCAGCTGCCCGCTGCAGTTGAGGGTGGTCTTTTGTGTAGCAGTCAGACACCTGAGGAGGTCTCGGAAACATTTAGGCTACTAGAAGAAGGATCCATTAAGGTCCTTTTTGTTTCACCTGAGAGGTTTCTCAATTCGGAATTTTTATCCATTTTTTGTAACACTCAAATCTCACTTGTGGTTATTGATGAAGCCCACTGTGTTTCTGAATGGTCACACAATTTTCGGCCTTCATATATGCGGCTTAAAGCATCATTGTTGCGGGATAAACTGAAGGCTCAATGCATACTTGCAATGACAGCAACAGCAACTACTAAAGCATTGTCTCATGTGATGCACGCATTGGATATTCCATCAACTAATCTTATCCAAGTAGTGAAACCAAGGGATAACTTGCAGTTATCAGTATCTTCAAGCGAAAACAGGATGAAAGATTTGATGACCTTGCTGAAGTCTTCCCCCTTTTCAGAGGCTAAAAGCATTATCATTTACTGCAAATTTCAGTCAGAAACTGATTTCATTTGCAAATATCTATGCGACAATAATATCTTAGCAAAGAGTTATCACAGTGGAATTTTCGCAAAAGATAGGAGCCGTACGCAGGAACTGTTTTGTGCAAACAAGATAAGAGTGGTTGTTGCAACTGTGGCATTCGGCATGGGACTCAATAAGAAGGATATTGAAGCTGTAATACATTACAGCTTACCAGAAAGCTTGGAAGAGTATGTCCAGGAGATTGGCCGTGCTGGACGTGATGGTAGAATCTCTTACTGCCATCTGTTTTTTGATGATGTTTCCTATTTTAAGATTCGCAGTCTTATGTACAGTGATGGTGTCGACGAGTATGTGGTGAACAAATTGCTGTGTCAAATTTTCAGTGGCAGCACAACCTCTGCTGGGATAATATGTTCATTAGTTAAAGAGTCTGCTTGTCGTAAATTTGATATGAAAGAAGAGGTAATATTAACAATTTTAACACAATTGGAGCTAGGTGAGGTTCAATACTTACAATTGCTCCCACAGACGAGTGTAACATGCACTTTGAACTTCCACCAGACTTCTCCTGCATTGCTAGCTATGAAAGATGCTGTAGTTGCTGCTATTCTGAAGAACTCCGAGATCAAAGATGGGCAGTATATATTTGACATACCAAGTGTAGCTAACAGCATTGGACTGCAAATTGTTGACTTGTCAAACCATTTGCAAACTCTGAAGATTAAGGGGGAAGTCAGATATGAGCTGAAGGATCAAGCTTATTGTTATGTTATCATGGACACCCCAAAGGATATCTGTTCTTTAGCAACATGGCTTACAAAGTGGTTATCTGAAGTTGAGAGTTGTAAGGTAAGGAAGATGGACACAATGTATGATGCTGCTGTATTTGCAACAGAAGCATGTGACAAAGTGCATGGTTGCCATGACCATCAACATACACCTTGCTTGCAAAGGAAGATTACAGAATATTTTGTAAATGGTACTGAAGTTGAGGTTCCAAAGAGGATTGGTGGAAGCAGCCCATTTTTGACAGCTGACATAAAGGTGTTTCTACAGTGCAACTCATATGCCAAATTTACTCCCAGAGCCATTGCAAGGATATTGCATGGTATTGCAAGTCCAGCATTCCCGTCTGCTGTTTGGTCGAGAACTCACTTCTGGGGAAGGTATATGCAAACAGACTTCAAAGCAATAACCGAAGTAGCAAAGGCGGAGCTCATGAAACTTGTAGGGAAGGATATTACTGGCCCGTGTTCAAGATTGAAGGCCAGTAGATGTTTAGAGGCGGATTTAGGATCTGCAGTTGATGGATACATATCTCGAGAATACTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g014690.1.1SL2.50ch05:8814438..88256641,003+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g014690.1SL2.50ch05:8814439..882566411,226+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g014690.1.1.1SL2.50ch05:8814439..88156681,230+n/a
exonexon:Solyc05g014690.1.1.10SL2.50ch05:8817826..881792095+n/a
exonexon:Solyc05g014690.1.1.11SL2.50ch05:8818003..8818132130+1
exonexon:Solyc05g014690.1.1.12SL2.50ch05:8818783..881888199+n/a
exonexon:Solyc05g014690.1.1.13SL2.50ch05:8819143..881919856+n/a
exonexon:Solyc05g014690.1.1.14SL2.50ch05:8819287..8819389103+1
exonexon:Solyc05g014690.1.1.15SL2.50ch05:8821113..8821241129+n/a
exonexon:Solyc05g014690.1.1.16SL2.50ch05:8823784..8823953170+n/a
exonexon:Solyc05g014690.1.1.17SL2.50ch05:8824266..882429025+1
exonexon:Solyc05g014690.1.1.18SL2.50ch05:8824374..8824489116+n/a
exonexon:Solyc05g014690.1.1.19SL2.50ch05:8825084..882516279+1
exonexon:Solyc05g014690.1.1.2SL2.50ch05:8815758..881581154+n/a
exonexon:Solyc05g014690.1.1.20SL2.50ch05:8825572..882566493+n/a
exonexon:Solyc05g014690.1.1.3SL2.50ch05:8816280..8816389110+n/a
exonexon:Solyc05g014690.1.1.4SL2.50ch05:8816519..8816731213+1
exonexon:Solyc05g014690.1.1.5SL2.50ch05:8816821..881689979+1
exonexon:Solyc05g014690.1.1.6SL2.50ch05:8817011..881706454+n/a
exonexon:Solyc05g014690.1.1.7SL2.50ch05:8817181..881725575+n/a
exonexon:Solyc05g014690.1.1.8SL2.50ch05:8817363..881741654+n/a
exonexon:Solyc05g014690.1.1.9SL2.50ch05:8817692..881773645+n/a
intronintron:Solyc05g014690.1.1.1SL2.50ch05:8815669..8815757n/a+n/a
intronintron:Solyc05g014690.1.1.10SL2.50ch05:8817921..8818002n/a+n/a
intronintron:Solyc05g014690.1.1.11SL2.50ch05:8818133..8818782n/a+n/a
intronintron:Solyc05g014690.1.1.12SL2.50ch05:8818882..8819142n/a+n/a
intronintron:Solyc05g014690.1.1.13SL2.50ch05:8819199..8819286n/a+n/a
intronintron:Solyc05g014690.1.1.14SL2.50ch05:8819390..8821112n/a+n/a
intronintron:Solyc05g014690.1.1.15SL2.50ch05:8821242..8823783n/a+n/a
intronintron:Solyc05g014690.1.1.16SL2.50ch05:8823954..8824265n/a+n/a
intronintron:Solyc05g014690.1.1.17SL2.50ch05:8824291..8824373n/a+n/a
intronintron:Solyc05g014690.1.1.18SL2.50ch05:8824490..8825083n/a+n/a
intronintron:Solyc05g014690.1.1.19SL2.50ch05:8825163..8825571n/a+n/a
intronintron:Solyc05g014690.1.1.2SL2.50ch05:8815812..8816279n/a+n/a
intronintron:Solyc05g014690.1.1.3SL2.50ch05:8816390..8816518n/a+n/a
intronintron:Solyc05g014690.1.1.4SL2.50ch05:8816732..8816820n/a+n/a
intronintron:Solyc05g014690.1.1.5SL2.50ch05:8816900..8817010n/a+n/a
intronintron:Solyc05g014690.1.1.6SL2.50ch05:8817065..8817180n/a+n/a
intronintron:Solyc05g014690.1.1.7SL2.50ch05:8817256..8817362n/a+n/a
intronintron:Solyc05g014690.1.1.8SL2.50ch05:8817417..8817691n/a+n/a
intronintron:Solyc05g014690.1.1.9SL2.50ch05:8817737..8817825n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17821269%2Fdetails feature 17821269
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)