Solanum lycopersicum mRNA Solyc05g015510.2.1

mRNA details  
Name
Solyc05g015510.2.1
Type
mRNA
Length
3,487
Organism
Solanum lycopersicum
Description
Squamosa promoter-binding-like protein 11 (AHRD V1 ***- B6TF72_MAIZE); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box
Location(s)
SL2.50ch05:10767268..10772201
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
4934
Nb exon
4
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g015510.2.1 Squamosa promoter-binding-like protein 11 (AHRD V1 ***- B6TF72_MAIZE); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box

TTTCTTCTATTCTATATCTTATTTACCAAGTTAATCATTTTTCTTTAACAACCTTTTGTTCTCTCAATCTGAGTTTTGCTTCTTCTTATCGATTCTTGGAGAAATTGATTAATGGTATGGGGATTTCTTGATTTAGAATTAAGTATAATTATTTTTACAACAAGTGTCTTTTTTTTTTTTGCACTTTTGGAGTTAAAGACTTGAGGGAATGGGTTCTTGTTAGCTCAAATCTTCCATATTCGGACACCTTTTTCTTTTCTTGGTTTGTGTTACCTGCTTAACTTACTTTATTTATTTCTGTAATTTTTATCCTTTTTTGGTGAAACAGATTAAGGGAATATATTGTTATTTGCTGATAACTTGCATAATATGGAAAATCTTTATGGGTTTCAGAGACCCTTTTACTTTCTTTATTTTCTGGGTTTGGAATTAAACTGATGTGAGAGAAGCAAAATTGACCCAATTCGTTTGTAGCTTCGGTTGATGTTAGTTTTTCTTAAAGAGATTGGAGGTAAAGTTTGCAGCATTTACGATGCTGACTTCCTAAACGATGAGGTTTACTAGCATTTTTCTTGGAAAAGAATTCATCCGTAAGTTCAAGGATGGAAAAGTCTGTCTTCTTCTTTTGGTGTGGATTCCAATGAAACCCTAAGATGGGGGACCATAACTTTCCAAACAAGTACCAACTACCCATCTCTCTACTCTTAAGAAAAAAATGTGTTTTTTTTTTAATCTTCTTTTCAATCATAGATATATTAGATGAAGAGATAAAAAAAACATACAAATTTTGGAGTGTTTCATATCTGTAAAAAGGGTGTCAGTAAATCTGTCACAATCAAAGAAAACAGAATAATTAAACTTGCATATTTATTAGGCTGAGTCGTCGGCAAGCATTTGTTTGTGCCATTTGTGGGGTTAATGAACCATTTAATGTTTGGTTATTTATTTGGTTTCATTGATTAGGTGATGAAACAAGTAGCTGAAAATGATGTTGTGGAGTTAACAGATGGGAGAAACATTTGTTGTCTTGGACTGGAAGGGATTGAGCTCTGTTTCTGTATTTGAATAGTTATCCTTGTCTCCTTATAGTCTTAATCAGCTTCGTACTAGTTACTGGAATCATACAGCTCTGTCAAAGAGGTGAATCTCATTTTCTACCTTGTCTTGAAATAATTGAAGTTCATCTAGTAGTCGGTAGTTTGTGTGTGAGTTGCTTTAGAGTACGAGTCGCAGTAATTACTATACCCTTTTTGTTTCTTTTCATTTCTCTCTTTTTAAAAAAATAAGCTGCTGTTTGTTAGATTATGAGTGGGAACTAGCAGAGGAATAGTTTCAGACATACTATTAATTGTGTGTATCATGGTGAATCTCTCTTGATTTCAAGAATTCAAGTAGTATATGTTATGGGGCTTGGATGTTTGACTGGTGATCTGAGGGACAGTACTTTTGTCATAATTTAGTTCATTTTGCTTTGAGCTGTTCAAGTAGTAGTGGAAAAGAAGTTGGATTAGGAAAGATACAAAGATCCTGCTAGTGAGAAAGAGAATTAGTGAGCTACAGTAGAGGTAGAACAGCAAATTTGTGAATCTACATAATTGATGGGAAGGTCTCCTTTTCTTTTCTTCTTGTCCTGAATTTGTCTACTTGCATTTCTCTTCTTGCTTCCCTGTTGTCCGACAAAATGCTTGCTTTGCCTTTTGTGAAATTACGTACTTGTTAAACTATCAGTTTAACTTTGTGTGTAAATATTTTGCAGATTCAAGTCTTAATTACTCTTTTGCATTCCATGAGTCTGGGAATTTGGTAAAGCCATCTCGTAGTTTCTTTCCCAAGATGGAGTGGAATGTGAAGTGGGACTGGGGAAATCTGGTAATGTTTGGTTCAAAGGCCTCTGAAAGTCCAAAAGAACTACAATTAACAGATTGGGGAGTTGAAGAAGAGGGAGAACTTGATGGGGGATCTTTTAATTTGTCAAGTGGTGGTAGTGGCACGGGTGGCTATGGTTCTGATCTGAAGTGTGGTTCTTCCATCAAAAGCTCAATATCAGCTTCTACTGACTCTTCACCAAAGGATGGCTTTAAAGTATCCAACTTTGCTTTTGAGACATTTAATGCCTCTCCTGAGGATCCTAGTAAGAAATTGGAATCCTCCAAAGCCGAGGTCTCTAGAAATTCACCACCCATGGAGGCTTCAGTAGGCTCTGTTGAACCAGTGATAGGTCTAAAAATTGGTAAGCGGACATGTGAAACCTTTGGTGGTGGAAGCAGTGCTAAGGTTTCATCCTTCCCCCCGAACCCCGCATCATCTGCTGCTGCAACAAAGAAAGCAAAATCATCTACTCAGAATGCACCAATTCCTCACTGTCAGGTTGAAGGTTGCAACCTTGATCTTTCTTCAGCTAAAGAATATTATCGTAAGCATAGAGTTTGTGACAGTCATTCCAAAAGCCCAAAGGTTATTGTAGCAGGTGTAGCACGCCGCTTTTGTCAACAGTGTAGCAGGTTCCATAGCGTGTCTGAATTTGATGACAAGAAGCGAAGCTGTCGTAGGAGGCTCTCTGATCACAATGCACGGCGCCGCAAACCTCACCAGGAAACTATCCAGTTCAATTCAGCGAGGCTTTCGTCGTTGTTTTATGATAGCAGGCAACCTATGAATCTTGTGCTCAACGAAGCACAACTCATTCACTCCAGAGCTGCTGCAAACGCTACCTGGGAGAGCACTCAAGACTCTAAGTTCAGTATAACAAGAGAGTTTACTCCAAAGCCTGAAAGAACTGGCAGCACAAATGGGAAGTCATTACTGGAGAGGAACCAGTTTTCACGGGCTGTGGGTGCACACAGTAACGCATCTAGCTTGCTCTTGCCCTCCAAGGGCACCACAGCCGAGGTTTTTAATCGAGGTGCCAAGGAATCCATGTTCAATATGGTTACAGGACCGGAATTTCCTCGTGCTCTCTCTCTTCTGTCAACTAATTCGTGGGGTTCATCCGAGCCTGAGAGTGTTTCACTCAACCATGCAAATCAGACCAGCATGCCCGAGCAGATGATGCAGGCAATTCCACCGCATATGTCCAGTCAATACTGGCAGGCTGGACAACATTCATCCGATCCTCGTTACCATACATTGGCTGCTGCAAATAGTAACAGTGGTGGTAGCTTTCAGGAAATGGGAGTGTTCAAAGCTCCTTTCGACACGGACTTTTATCTCAATGCATTGAACTGAAGCCAACAACTGATGACTTTTGTGTATTTTCAGGACTTGGCGAGATGAAGCAGGTCTGTTAGTATGATGATGATCTTGAAGCAAATTAGTTCTGGTATATATTATATATAATATAGGTCGGGCTTTTAAACTATTATGAAAGTCTAATATTATGAATTATGCACTAAATTTTTGTTTGCTTTATTTAAGCAGTGAGACATGAATTCCCAAGAATTGTAATTTCTTGATTCTGCAACTTGGAATATAACTGCACAGTTTATCC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g015510.2.1SL2.50ch05:10767529..10770368464-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g015510.2SL2.50ch05:10767268..107722014,934-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g015510.2.1.1SL2.50ch05:10769701..107722012,501-1
exonexon:Solyc05g015510.2.1.2SL2.50ch05:10769423..10769559137-2
exonexon:Solyc05g015510.2.1.3SL2.50ch05:10768778..10769041264-2
exonexon:Solyc05g015510.2.1.4SL2.50ch05:10767268..10767852585-n/a
intronintron:Solyc05g015510.2.1.2SL2.50ch05:10769560..10769700n/a-n/a
intronintron:Solyc05g015510.2.1.3SL2.50ch05:10769042..10769422n/a-n/a
intronintron:Solyc05g015510.2.1.4SL2.50ch05:10767853..10768777n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17822050%2Fdetails feature 17822050
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