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Solanum lycopersicum mRNA Solyc05g015750.2.1

mRNA details  
Name
Solyc05g015750.2.1
Type
mRNA
Length
1,033
Organism
Solanum lycopersicum
Description
Transcription factor MADS-box 2 (AHRD V1 **** D5HSY6_9ROSA); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box IPR002487 Transcription factor, K-box
Location(s)
SL2.50ch05:11898903..11905313
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
6411
Nb exon
8
Sifter term
  • GO:0005515
  • GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g015750.2.1 Transcription factor MADS-box 2 (AHRD V1 **** D5HSY6_9ROSA); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box IPR002487 Transcription factor, K-box

TATATATACATATTGCATATGTATATATAAAAAGATTGAAACAAAGAAAAAAGGGGTTTTGTGCTTTTGTAAGTTTGAGAAAGAGGAAAAAGAAAAATGGGAAGGGGTAGGGTTGAGCTAAAGAGAATAGAGAACAAGATCAACAGGCAAGTGACCTTTGCTAAGAGAAGAAATGGGCTTTTGAAGAAAGCTTATGAGCTTTCAGTTCTTTGTGATGCTGAGGTTGCTCTAATCATCTTCTCTAATAGGGGAAAACTCTATGAGTTCTGCAGTAGTTCTAGCATGCTAAAGACGTTGGAGAGGTACCAGAAGTGCAACTATGGAGCACCTGAACCGAATATATCAACACGAGAAGCACTGGAAATTAGTAGCCAGCAGGAGTACTTGAAGCTTAAAGGACGTTACGAAGCATTGCAGCGATCACAGAGGAATCTTCTTGGTGAAGATCTTGGTCCTTTGAACAGCAAAGAACTTGAATCACTTGAGAGACAACTTGATATGTCGCTCAAACAGATCAGATCAACTCGGACTCAGTTAATGTTGGATCAACTTACAGATTATCAGAGAAAGGAACATGCATTGAACGAAGCCAACAGAACCTTGAAACAAAGGTTGATGGAAGGAAGCCAACTAAATCTGCAGTGGCAGCCAAATGCACAAGATGTGGGCTATGGCCGGCAAACAACTCAAACTCAGGGCGATGGCTTCTTTCATCCTTTGGATTGTGAACCTACTTTGCAAATTGGGTATCAGAATGATCCAATAACAGTAGGAGGAGCAGGGCCTAGTGTGAATAACTACATGGCTGGCTGGTTGCCTTGAAGGCTCACGATTCTGATCATAACATTATTATAAATATGCTCAATGGTTTTCCTATCATCATAAACATTGAATATCTCCTAATTTCTGTATGTTGTTTGAGAAAATGTTTCATCCTGGACCTAACGGGGATCCATAAGACAATCCCGTTATTGTTAGTAAATCATAAACTAGATTTCTTTGAGTGCTTAACCAGTTGACTTATGTTCCTCCA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g015750.2.1SL2.50ch05:11899113..11905217242-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g015750.2SL2.50ch05:11898903..119053136,411-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g015750.2.1.1SL2.50ch05:11905033..11905313281-1
exonexon:Solyc05g015750.2.1.2SL2.50ch05:11904106..1190418479-n/a
exonexon:Solyc05g015750.2.1.3SL2.50ch05:11900738..1190080568-1
exonexon:Solyc05g015750.2.1.4SL2.50ch05:11900547..11900646100-n/a
exonexon:Solyc05g015750.2.1.5SL2.50ch05:11900424..1190046542-n/a
exonexon:Solyc05g015750.2.1.6SL2.50ch05:11900228..1190026942-n/a
exonexon:Solyc05g015750.2.1.7SL2.50ch05:11899545..11899678134-1
exonexon:Solyc05g015750.2.1.8SL2.50ch05:11898903..11899189287-n/a
intronintron:Solyc05g015750.2.1.2SL2.50ch05:11904185..11905032n/a-n/a
intronintron:Solyc05g015750.2.1.3SL2.50ch05:11900806..11904105n/a-n/a
intronintron:Solyc05g015750.2.1.4SL2.50ch05:11900647..11900737n/a-n/a
intronintron:Solyc05g015750.2.1.5SL2.50ch05:11900466..11900546n/a-n/a
intronintron:Solyc05g015750.2.1.6SL2.50ch05:11900270..11900423n/a-n/a
intronintron:Solyc05g015750.2.1.7SL2.50ch05:11899679..11900227n/a-n/a
intronintron:Solyc05g015750.2.1.8SL2.50ch05:11899190..11899544n/a-n/a
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Related viewsNone found
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