Solanum lycopersicum mRNA Solyc05g043330.2.1
mRNA details
|
| Name | Type |
Length
1,311
|
Organism |
| Description |
|
Location(s)
SL2.50ch05:55977510..55985270
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0006629
- Length
- 7761
- Sifter term
- GO:0004091
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc05g043330.2.1 GDSL esterase/lipase At2g04570 (AHRD V1 ***- GDL34_ARATH); contains Interpro domain(s) IPR001087 Lipase, GDSL
CATAACCTTAACCCAAAAAAAAAATGGAAGCTTATTACAAGTTCATTCCATGTCTTATTATAATTTTTGTTCAACTAACTATTATTATCCCTTGTGTTATAGGAGGAAAAGTTCCAGCAATTATAGTATTCGGCGATTCATCGGTAGATGCTGGAAATAATAATCAAATTTCTACTGTTCTTAAGAGTAATTTTGAGCCTTATGGACGTGATTTTTATGGTAAAATGCCAACAGGAAGATTTTGTAATGGGCGTATTCCGCCTGATTTTATATCAGAGGCTTTTGGTTTGAGACCATTTGTGCCTGCTTATTTGGATCCAATGTTTAGTATTACTGATTTTGCTGGTGGAGTTTGTTTTGCTTCTGCTGGTACTGGTTATGATAATGCCACTTCTCAAGTTCTAAATGTGATACCATTGTGGAAGGAAATAGAGAACTACAAGGAGTATCAAAAGAAACTAGAAGCATATGTAGGGAGGAAAAAAGCAAAATACATAATACAAGAAGCACTCTATCTAGTGAGCTTGGGAACAAATGATTTCTTGGAAAATTATTATTCAATACAAAGCAAACGTGCATCTCAATTTACAATAGAACAATATCAAGGCTTTCTAATTGAACTTGCTGAGAATTTTATCAAAGAAATTTATCAACTTGGAGCTAGGAAAATATCATTTACTGGACTTCCTCCAATGGGATGTTTACCTTTAGAAAGAGCAACAAATATTATAGGAGGACATGGAGTTGCATGCAATGAGAAATATAATGATTGTGCTTTGAGGTTTAATGTGATGTTGAATGGTTTGGTTGACAAGTTAAATAGGGAACTTCCAGGGATGAAAATGGTTTTTTCTAATCCATATGAGCTCATACTTCAAATTATCAGAAATCCTTCCTCATTTGGATTTGAGGTAGCTGGTGTAGCATGTTGTGGCACAGGATTATTTGAAATGAGTTATTTATGTGACAAATTAAACCCACTAACATGCACTGATGCAAATAAATATGTATTTTGGGATTCTTTCCATCTCTCCCAAAAAACTAATCTCATTATCACCAATTTCTTGATGAAAAATGTACTCAATCAATTTTTATAATATCATGTAACTTTGTACAACCATTTATTGTCTTGTTTTTTATTTAATTTGCTAAAATATATTATAAAATGTACTACGATCCAGAGTGTGAAAAAAACAATATATATTTCATTGTATATATTGGTCATATTTGTAATCTTCATGTAATTTGTGATTCTTGTTTGTGTAATAAACTTGTATTTATTCGTTTAAGGATATTAAAAAAGTAAAATAG
CATAACCTTAACCCAAAAAAAAAATGGAAGCTTATTACAAGTTCATTCCATGTCTTATTATAATTTTTGTTCAACTAACTATTATTATCCCTTGTGTTATAGGAGGAAAAGTTCCAGCAATTATAGTATTCGGCGATTCATCGGTAGATGCTGGAAATAATAATCAAATTTCTACTGTTCTTAAGAGTAATTTTGAGCCTTATGGACGTGATTTTTATGGTAAAATGCCAACAGGAAGATTTTGTAATGGGCGTATTCCGCCTGATTTTATATCAGAGGCTTTTGGTTTGAGACCATTTGTGCCTGCTTATTTGGATCCAATGTTTAGTATTACTGATTTTGCTGGTGGAGTTTGTTTTGCTTCTGCTGGTACTGGTTATGATAATGCCACTTCTCAAGTTCTAAATGTGATACCATTGTGGAAGGAAATAGAGAACTACAAGGAGTATCAAAAGAAACTAGAAGCATATGTAGGGAGGAAAAAAGCAAAATACATAATACAAGAAGCACTCTATCTAGTGAGCTTGGGAACAAATGATTTCTTGGAAAATTATTATTCAATACAAAGCAAACGTGCATCTCAATTTACAATAGAACAATATCAAGGCTTTCTAATTGAACTTGCTGAGAATTTTATCAAAGAAATTTATCAACTTGGAGCTAGGAAAATATCATTTACTGGACTTCCTCCAATGGGATGTTTACCTTTAGAAAGAGCAACAAATATTATAGGAGGACATGGAGTTGCATGCAATGAGAAATATAATGATTGTGCTTTGAGGTTTAATGTGATGTTGAATGGTTTGGTTGACAAGTTAAATAGGGAACTTCCAGGGATGAAAATGGTTTTTTCTAATCCATATGAGCTCATACTTCAAATTATCAGAAATCCTTCCTCATTTGGATTTGAGGTAGCTGGTGTAGCATGTTGTGGCACAGGATTATTTGAAATGAGTTATTTATGTGACAAATTAAACCCACTAACATGCACTGATGCAAATAAATATGTATTTTGGGATTCTTTCCATCTCTCCCAAAAAACTAATCTCATTATCACCAATTTCTTGATGAAAAATGTACTCAATCAATTTTTATAATATCATGTAACTTTGTACAACCATTTATTGTCTTGTTTTTTATTTAATTTGCTAAAATATATTATAAAATGTACTACGATCCAGAGTGTGAAAAAAACAATATATATTTCATTGTATATATTGGTCATATTTGTAATCTTCATGTAATTTGTGATTCTTGTTTGTGTAATAAACTTGTATTTATTCGTTTAAGGATATTAAAAAAGTAAAATAG
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc05g043330.2.1 | SL2.50ch05:55977532..55981744 | 358 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc05g043330.2 | SL2.50ch05:55977510..55985270 | 7,761 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc05g043330.2.1.1 | SL2.50ch05:55977510..55977913 | 404 | + | n/a |
| exon | exon:Solyc05g043330.2.1.2 | SL2.50ch05:55980593..55981091 | 499 | + | n/a |
| exon | exon:Solyc05g043330.2.1.3 | SL2.50ch05:55981551..55981944 | 394 | + | n/a |
| exon | exon:Solyc05g043330.2.1.4 | SL2.50ch05:55985257..55985270 | 14 | + | 2 |
| intron | intron:Solyc05g043330.2.1.1 | SL2.50ch05:55977914..55980592 | n/a | + | n/a |
| intron | intron:Solyc05g043330.2.1.2 | SL2.50ch05:55981092..55981550 | n/a | + | n/a |
| intron | intron:Solyc05g043330.2.1.3 | SL2.50ch05:55981945..55985256 | n/a | + | n/a |
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mRNA details
mRNA details

