Solanum lycopersicum mRNA Solyc05g050010.2.1

mRNA details  
Name
Solyc05g050010.2.1
Type
mRNA
Length
1,707
Organism
Solanum lycopersicum
Description
1-aminocyclopropane-1-carboxylate synthase (AHRD V1 **** Q659H5_SOLLC); contains Interpro domain(s) IPR004839 Aminotransferase, class I and II IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site
Location(s)
SL2.50ch05:59888702..59891616
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0009058
  • GO:0030170
Length
2915
Nb exon
3
Sifter term
  • GO:0042803
  • GO:0016847
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g050010.2.1 1-aminocyclopropane-1-carboxylate synthase (AHRD V1 **** Q659H5_SOLLC); contains Interpro domain(s) IPR004839 Aminotransferase, class I and II IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site

TCTTCCAAACAAAAACTTTTGTACTTCAAATTTCACTAGGCTATTAAACTAAATTCATAAAAATTAGGAAATAATAAAATGGATTTGGAGACGAGTGAGATTTCAAATTACAAGTCATCAGCAGTTTTGTCTAAGTTGGCTAGTAACGAACAACATGGTGAAAACTCACCATATTTTGATGGGTGGAAAGCATACGATAACGACCCTTTCCACTTGGTGAATAATTTGAATGGGGTTATTCAGATGGGTCTCGCGGAAAATCAGCTTTCAGTTGACTTGATTGAAGAATGGATTAAGAGAAATCCAAAAGCTTCCATTTGTACAAATGATGGAATTGAATCTTTCAGGAGAATTGCCAACTTTCAAGATTATCATGGATTGCCTGAATTCACAAATGCGATTGCAAAATTTATGGAGAAAACAAGAGGTGGTAAGGTTAAGTTTGACGCTAAACGTGTAGTAATGGCTGGTGGAGCTACTGGAGCTAATGAGACTCTCATACTTTGTTTGGCTGATCCTGGTGATGCTTTTTTAGTCCCCACACCCTATTACCCAGGATTTAATAGGGACCTAAGGTGGAGAAGTGGTGTACAACTTTTACCAATTTCATGCAAGAGTTGCAATAATTTCAAAATTACAATAGAAGCTATCGAAGAGGCCTATGAAAAAGGTCAACAAGCAAATGTCAAAATCAAAGGCTTGATTTTGACCAACCCTTGTAATCCATTAGGTACCATTTTAGATAGGGACACACTTAAAAAAATCTCCACTTTCACTAACGAACATAATATCCATCTTGTTTGCGACGAAATATATGCTGCTACCGTATTCAATCCTCCAAAATTCGTTAGCATCGCTGAAATTATCAACGAAGATAATTGTATCAATAAAGATTTAGTACACATTGTGTCTAGTCTTTCCAAGGACTTAGGTTTTCCAGGATTTCGAGTGGGAATTGTGTACTCGTTCAACGATGATGTTGTTAACTGTGCTAGAAAAATGTCGAGTTTTGGTCTTGTTTCGACTCAGACACAACATTTGCTAGCTTTCATGTTGTCTGACGATGAATTTGTGGAAGAATTTCTTATTGAAAGCGCGAAAAGGTTGAGAGAAAGGTACGAGAAATTCACTAGAGGACTTGAAGAAATAGGAATCAAGTGCTTAGAAAGCAATGCAGGGGTTTATTGTTGGATGGATTTGCGGTCATTGTTGAAAGAAGCAACACTAGATGCTGAGATGTCACTTTGGAAACTCATCATAAACGAAGTTAAGCTCAACGTCTCCCCTGGATCTTCGTTCAATTGCTCGGAGGTAGGATGGTTTCGAGTTTGTTTTGCAAATATCGATGATCAAACAATGGAGATCGCACTTGCAAGGATTCGGATGTTTATGGATGCTTACAACAATGTTAATAAAAATGGAGTCATGAAGAACAAGCACAATGGAAGAGGAACAACCTACGACTTAACTCCTCAAATGGGGAGTACGATGAAAATGTTATTAGCTTAAATATCATGTCTCCTAATTCTCCAATTCCTTGCTCGTAGTGCGAGCAAACAAAATTATTGTTGTACAATCAAATAAAGTTATAAAGCTTGTAAATAAACTAGATTCGCCCAGGCTCGTGCTAAAGCACGGGCCCAACATAGTTAATTTTAGTGTCCTAACACAACCAAATTAATTTTATGTTGATTTTAGTGTCGCCTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g050010.2.1SL2.50ch05:59888779..59891418477+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g050010.2SL2.50ch05:59888702..598916162,915+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g050010.2.1.1SL2.50ch05:59888702..59889097396+n/a
exonexon:Solyc05g050010.2.1.2SL2.50ch05:59889574..59889734161+n/a
exonexon:Solyc05g050010.2.1.3SL2.50ch05:59890467..598916161,150+n/a
intronintron:Solyc05g050010.2.1.1SL2.50ch05:59889098..59889573n/a+n/a
intronintron:Solyc05g050010.2.1.2SL2.50ch05:59889735..59890466n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17828554%2Fdetails feature 17828554
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