Solanum lycopersicum mRNA Solyc05g050040.1.1
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Name | Type | Organism | |
Synonyms / aliases
mRNA:Solyc05g050040.1.1
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Length
837
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Description
WRKY transcription factor 22 (AHRD V1 *-*- C5H9Z0_BRANA); contains Interpro domain(s) IPR003657 DNA-binding WRKY
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Location(s)
SL2.50ch05:59979333..59980454
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Ontology term(s) |
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0045449
- Length
- 1122
![]() | spliced mRNA sequence, including UTRs |
>Solyc05g050040.1.1 WRKY transcription factor 22 (AHRD V1 *-*- C5H9Z0_BRANA); contains Interpro domain(s) IPR003657 DNA-binding WRKY
ATGGAGGATGATCATCGGGATATAGGTGCAATAGCAAGAAGTTGTAATATGAATAAACCTAACAATGTTGTAGCTCCTAAATTAGGTTTGAAAGCATCTCATGTTTGGAATTATTTTGACAGAGTTTTAGCTCCTGGCATGAATAGTTTTAATGGTTCATCTAAAAGTGTTTCTTTAGATTTTCCAATAGCTCGTCAGGAAAGATCATATGATCAGGTTAGCAACCAGCAATTCTACTTGCATTCAATTGAACCAGTTCAATTTTTCCAACAAATCATTGTTCCTCAATCTCGAACAGCGGTGGCATGTGTTCCACCAACTACAACACAGCCAGAACGGATAGATCTACAACAACAACTCGATATAGGGAAAAATCAGTCGATAAGGCTTACCTATGAATTATCACAAGAGGAACTCACAAATGACAAATGGGCATGGAGCAAGTATGGTCAAAAGTATATAAAAGGTTCCCCATTTCCAAGGAATTACTATAAGTGTAGCACATCAAAACAATGCGAAGCAAAGAAACAAATTGAGAAAAGCTCAAAGGATGAGAACATTTTCTTTGTATCTTGTTCCGGTGAACACAATCATGATCCACCCATGAGCCGTAGATATCTTGCTAGCTTCAAAAATAATTCCAAATTCAAGATTCCAAAAAGCATAAATATTTTTCCCAAAGAATCAATCTTTAATGCATCATCATCATCGTCCAAGTGCATTAAGCATTCAACAGATGTTGCTTCTTCAATTATCGGAACTAAGCCTCCACTTGAAATCGGGAGCAAAAACAAAATGCTTTTTGCGGTCGTGCAGAACAAAGGTGATGGTAAATAA
ATGGAGGATGATCATCGGGATATAGGTGCAATAGCAAGAAGTTGTAATATGAATAAACCTAACAATGTTGTAGCTCCTAAATTAGGTTTGAAAGCATCTCATGTTTGGAATTATTTTGACAGAGTTTTAGCTCCTGGCATGAATAGTTTTAATGGTTCATCTAAAAGTGTTTCTTTAGATTTTCCAATAGCTCGTCAGGAAAGATCATATGATCAGGTTAGCAACCAGCAATTCTACTTGCATTCAATTGAACCAGTTCAATTTTTCCAACAAATCATTGTTCCTCAATCTCGAACAGCGGTGGCATGTGTTCCACCAACTACAACACAGCCAGAACGGATAGATCTACAACAACAACTCGATATAGGGAAAAATCAGTCGATAAGGCTTACCTATGAATTATCACAAGAGGAACTCACAAATGACAAATGGGCATGGAGCAAGTATGGTCAAAAGTATATAAAAGGTTCCCCATTTCCAAGGAATTACTATAAGTGTAGCACATCAAAACAATGCGAAGCAAAGAAACAAATTGAGAAAAGCTCAAAGGATGAGAACATTTTCTTTGTATCTTGTTCCGGTGAACACAATCATGATCCACCCATGAGCCGTAGATATCTTGCTAGCTTCAAAAATAATTCCAAATTCAAGATTCCAAAAAGCATAAATATTTTTCCCAAAGAATCAATCTTTAATGCATCATCATCATCGTCCAAGTGCATTAAGCATTCAACAGATGTTGCTTCTTCAATTATCGGAACTAAGCCTCCACTTGAAATCGGGAGCAAAAACAAAATGCTTTTTGCGGTCGTGCAGAACAAAGGTGATGGTAAATAA
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc05g050040.1.1 | SL2.50ch05:59979332..59980454 | 279 | - | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc05g050040.1 | SL2.50ch05:59979333..59980454 | 1,122 | - | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc05g050040.1.1.1 | SL2.50ch05:59980087..59980454 | 368 | - | n/a |
exon | exon:Solyc05g050040.1.1.2 | SL2.50ch05:59979842..59979955 | 114 | - | 1 |
exon | exon:Solyc05g050040.1.1.3 | SL2.50ch05:59979333..59979687 | 355 | - | 1 |
intron | intron:Solyc05g050040.1.1.2 | SL2.50ch05:59979956..59980086 | n/a | - | n/a |
intron | intron:Solyc05g050040.1.1.3 | SL2.50ch05:59979688..59979841 | n/a | - | n/a |
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