Solanum lycopersicum mRNA Solyc05g050340.2.1
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Name | Type |
Length
1,277
|
Organism |
Description
WRKY transcription factor 6 (AHRD V1 *-*- C9DHZ5_9ROSI); contains Interpro domain(s) IPR003657 DNA-binding WRKY
|
Location(s)
SL2.50ch05:60452745..60454931
|
Ontology term(s) |
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0045449
- Length
- 2187
![]() | spliced mRNA sequence, including UTRs |
>Solyc05g050340.2.1 WRKY transcription factor 6 (AHRD V1 *-*- C9DHZ5_9ROSI); contains Interpro domain(s) IPR003657 DNA-binding WRKY
GGAGACTTGTAAACAAGTCTTCAAACTGCTCATTTATATACAACTATCAAATTACTTTTTCTCAAAATTCATATTCAGATCTGTTTATTGTTGGCTATTAGCTTTGTTTGAACATAGTCAGTCAGTTTCGTGACTTTGTATAGCTGCGAAAAAAATGGGAGAAAACAGTTGTTGGGAGAGGGAAGTAGTGATTACTGAGCTAACAAAGGGGAAAGAATTGATGTTGCAGCTGCAAAAGCACTTTGATCCCATGAAACAGGGTGTGTGCCAGTATTTGGCTGCAGAAATACTTTCTTCCTATGATAAAGCTATGTCCCTCTTGAATGGCACAGCTTTATCTGGTATGATGATGAGTAAAGGTAAAGAGATTATTCATTCAACACCGTCTTCATCAACTGCGCCACAGCTGGAATCTCCTCATCTTCTGGCTGATAGTAGCACTAAGAGTTGTCACCGCCCCTCTAACTACAGGAAGAGGAAGATGCTGGAACGAAGGAAAGAGTATGTAGAAGCTCGACCCGGAGAAGAGGTTCCACCTGAAGATGGACTTAGTTGGAGAAAATATGGACAGAAAGTTATCTCAGGTTCAAAATATCCCAGAGAATATTATCGATGTGCTCGTCGTTGTTGTGGGGCTACTAAGATGGTCCAACGTATCGAGACAGGACCATTAACTTTTGAAATTACCTATGGAGGAAGTCACAGTTGTGGTCAAGAAACCAAAAATCAAGATGAAGAACTACTTGCTGTGCAGCAGACAAAATGTGATGAAGTTGAAAGAGGAGCTGGGGAAATATTTGAATCCTATATTCATAAGATGGTTTCAACCCCAAATAATTCATATAACAATTCCTCAACGGGGGTTGTGTTCTCAAACTCCAATTCTTTGTTCAACATCCCCACACCGACTTCTTCACCTCATCCAGACACAGACTTTCTACTTGACGATAATAATCTCGCTCTCTTGTTTGATCATGATGTGCCTGAAAATTCTGGCAATGATTCTCTGGCTGCTCTGGCTGGTGAGGTCTATAAACTCTATGAGGAGAATAACAAACTCAATTTTCCTCATCGTTACGACAAACAGGCTGAGGCTGAGAATTCCAGACCCTTGAACAATGTTGGGGACCGATCATAACGTAAGCCTACGAGTATTTCTCTTTGCTGGAACAGCACAAGCATGCAATTAATATAAAGGGAGAAGAAGAGGGCTCAAAATTTCTTCTTGTGTTCTACCTATAGCTCACGTGATAGATTTAAGACCACAAGTTTCTGTA
GGAGACTTGTAAACAAGTCTTCAAACTGCTCATTTATATACAACTATCAAATTACTTTTTCTCAAAATTCATATTCAGATCTGTTTATTGTTGGCTATTAGCTTTGTTTGAACATAGTCAGTCAGTTTCGTGACTTTGTATAGCTGCGAAAAAAATGGGAGAAAACAGTTGTTGGGAGAGGGAAGTAGTGATTACTGAGCTAACAAAGGGGAAAGAATTGATGTTGCAGCTGCAAAAGCACTTTGATCCCATGAAACAGGGTGTGTGCCAGTATTTGGCTGCAGAAATACTTTCTTCCTATGATAAAGCTATGTCCCTCTTGAATGGCACAGCTTTATCTGGTATGATGATGAGTAAAGGTAAAGAGATTATTCATTCAACACCGTCTTCATCAACTGCGCCACAGCTGGAATCTCCTCATCTTCTGGCTGATAGTAGCACTAAGAGTTGTCACCGCCCCTCTAACTACAGGAAGAGGAAGATGCTGGAACGAAGGAAAGAGTATGTAGAAGCTCGACCCGGAGAAGAGGTTCCACCTGAAGATGGACTTAGTTGGAGAAAATATGGACAGAAAGTTATCTCAGGTTCAAAATATCCCAGAGAATATTATCGATGTGCTCGTCGTTGTTGTGGGGCTACTAAGATGGTCCAACGTATCGAGACAGGACCATTAACTTTTGAAATTACCTATGGAGGAAGTCACAGTTGTGGTCAAGAAACCAAAAATCAAGATGAAGAACTACTTGCTGTGCAGCAGACAAAATGTGATGAAGTTGAAAGAGGAGCTGGGGAAATATTTGAATCCTATATTCATAAGATGGTTTCAACCCCAAATAATTCATATAACAATTCCTCAACGGGGGTTGTGTTCTCAAACTCCAATTCTTTGTTCAACATCCCCACACCGACTTCTTCACCTCATCCAGACACAGACTTTCTACTTGACGATAATAATCTCGCTCTCTTGTTTGATCATGATGTGCCTGAAAATTCTGGCAATGATTCTCTGGCTGCTCTGGCTGGTGAGGTCTATAAACTCTATGAGGAGAATAACAAACTCAATTTTCCTCATCGTTACGACAAACAGGCTGAGGCTGAGAATTCCAGACCCTTGAACAATGTTGGGGACCGATCATAACGTAAGCCTACGAGTATTTCTCTTTGCTGGAACAGCACAAGCATGCAATTAATATAAAGGGAGAAGAAGAGGGCTCAAAATTTCTTCTTGTGTTCTACCTATAGCTCACGTGATAGATTTAAGACCACAAGTTTCTGTA
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc05g050340.2.1 | SL2.50ch05:60452898..60454792 | 328 | + | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc05g050340.2 | SL2.50ch05:60452745..60454931 | 2,187 | + | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc05g050340.2.1.1 | SL2.50ch05:60452745..60453221 | 477 | + | n/a |
exon | exon:Solyc05g050340.2.1.2 | SL2.50ch05:60454003..60454125 | 123 | + | n/a |
exon | exon:Solyc05g050340.2.1.3 | SL2.50ch05:60454255..60454931 | 677 | + | 1 |
intron | intron:Solyc05g050340.2.1.1 | SL2.50ch05:60453222..60454002 | n/a | + | n/a |
intron | intron:Solyc05g050340.2.1.2 | SL2.50ch05:60454126..60454254 | n/a | + | n/a |
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