Solanum lycopersicum mRNA Solyc05g051880.2.1
 mRNA details
|
| Name | Type |
Length
1,005
|
Organism |
|
Description
Trehalose-6-phosphate phosphatase-like protein (AHRD V1 **** Q9LX18_ARATH); contains Interpro domain(s) IPR003337 Trehalose-phosphatase
|
|
Location(s)
SL2.50ch05:62283483..62288578
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| Ontology term(s) |
|
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005992
- Length
- 5096
- Sifter term
- GO:0004805
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc05g051880.2.1 Trehalose-6-phosphate phosphatase-like protein (AHRD V1 **** Q9LX18_ARATH); contains Interpro domain(s) IPR003337 Trehalose-phosphatase
ACACACTCTCTTTCTCTCACCTCTTTGCTATTCTTGTTCAAGAATCACAATTGCTCTGAAGTTCCACTCATCTTTTGTTCAACAAATTTAGATATAATAATGACTAAACAAAATTTATTTGATGCTAAATCCTGTGTCAATTCCACCATGTTCGTGGTGGAGATGGTTTCGCCACCTCCACCACCGCCGCCACGGGGAAGTTGCATCAATAATATTTCAAGAAAAACACTTGTTGAAATAAATGGTGATCCAAAGATAATGAAATCTTGGATTGATTCAATGAGAGCTTCTTCTCCTACTCATCACATGTCCACAACTCTCTATGAAGATAAGACTTCTTGGATGATGAGAGGAACAGTGAGAAAACTTGCTAGATATTTCCCTACTGCTATAGTTAGTGGGAGGTGCAGAGACAAGGTATACAATTTTGTACAATTATCAGAGTTGTACTATGCTGGAAGCCATGGGATGGATATAAAAGGACCATCAAAAGGTTCTAAATACAGTAAGAAAGGAACTCAAGCTATTCTTTTCCAACCAGCAAGTAAATTTCTTCCAATGATTATTGAGGTTTACAAAGAATTATTGGACAAAACAAAGTCTATCGAAGGTGTTAGAGTGGAGAATAATAAGTTTTGTGTGTCTGTGCATTTCCGTTGCGTCGATGAAAAGAAATGGGGTGAATTATCACAAGAAGTAAGGTTAGTGTTAAAAGAATATCCAAAGCTTAAATTATGTCAAGGAAGAAAAGTATTAGAGATCCGTCCTATTATTAAATGGGACAAAGGAAAAGCTCTTCAATTTTTGCTTCAATCACTTGGATATGCTAAATGTAATGATGTCTTTCCCATTTATATTGGTGATGATCGAACAGATGAAGATGCTTTCAAGGTACTTAGAGAAAGAAGGCAAGGTTTAGGCATTCTTGTTTCAAAAACTCCAAAAGAAACACATGCATCATATTCTTTACAAGAACCTTCTGAGGTGAGAATCTTTAAACATTAA
ACACACTCTCTTTCTCTCACCTCTTTGCTATTCTTGTTCAAGAATCACAATTGCTCTGAAGTTCCACTCATCTTTTGTTCAACAAATTTAGATATAATAATGACTAAACAAAATTTATTTGATGCTAAATCCTGTGTCAATTCCACCATGTTCGTGGTGGAGATGGTTTCGCCACCTCCACCACCGCCGCCACGGGGAAGTTGCATCAATAATATTTCAAGAAAAACACTTGTTGAAATAAATGGTGATCCAAAGATAATGAAATCTTGGATTGATTCAATGAGAGCTTCTTCTCCTACTCATCACATGTCCACAACTCTCTATGAAGATAAGACTTCTTGGATGATGAGAGGAACAGTGAGAAAACTTGCTAGATATTTCCCTACTGCTATAGTTAGTGGGAGGTGCAGAGACAAGGTATACAATTTTGTACAATTATCAGAGTTGTACTATGCTGGAAGCCATGGGATGGATATAAAAGGACCATCAAAAGGTTCTAAATACAGTAAGAAAGGAACTCAAGCTATTCTTTTCCAACCAGCAAGTAAATTTCTTCCAATGATTATTGAGGTTTACAAAGAATTATTGGACAAAACAAAGTCTATCGAAGGTGTTAGAGTGGAGAATAATAAGTTTTGTGTGTCTGTGCATTTCCGTTGCGTCGATGAAAAGAAATGGGGTGAATTATCACAAGAAGTAAGGTTAGTGTTAAAAGAATATCCAAAGCTTAAATTATGTCAAGGAAGAAAAGTATTAGAGATCCGTCCTATTATTAAATGGGACAAAGGAAAAGCTCTTCAATTTTTGCTTCAATCACTTGGATATGCTAAATGTAATGATGTCTTTCCCATTTATATTGGTGATGATCGAACAGATGAAGATGCTTTCAAGGTACTTAGAGAAAGAAGGCAAGGTTTAGGCATTCTTGTTTCAAAAACTCCAAAAGAAACACATGCATCATATTCTTTACAAGAACCTTCTGAGGTGAGAATCTTTAAACATTAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc05g051880.2.1 | SL2.50ch05:62283482..62288299 | 281 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc05g051880.2 | SL2.50ch05:62283483..62288578 | 5,096 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc05g051880.2.1.1 | SL2.50ch05:62288488..62288578 | 91 | - | n/a |
| exon | exon:Solyc05g051880.2.1.2 | SL2.50ch05:62288117..62288370 | 254 | - | n/a |
| exon | exon:Solyc05g051880.2.1.3 | SL2.50ch05:62286170..62286241 | 72 | - | n/a |
| exon | exon:Solyc05g051880.2.1.4 | SL2.50ch05:62285974..62286069 | 96 | - | n/a |
| exon | exon:Solyc05g051880.2.1.5 | SL2.50ch05:62285471..62285527 | 57 | - | n/a |
| exon | exon:Solyc05g051880.2.1.6 | SL2.50ch05:62285201..62285302 | 102 | - | n/a |
| exon | exon:Solyc05g051880.2.1.7 | SL2.50ch05:62284462..62284609 | 148 | - | n/a |
| exon | exon:Solyc05g051880.2.1.8 | SL2.50ch05:62284280..62284350 | 71 | - | 2 |
| exon | exon:Solyc05g051880.2.1.9 | SL2.50ch05:62283483..62283596 | 114 | - | n/a |
| intron | intron:Solyc05g051880.2.1.2 | SL2.50ch05:62288371..62288487 | n/a | - | n/a |
| intron | intron:Solyc05g051880.2.1.3 | SL2.50ch05:62286242..62288116 | n/a | - | n/a |
| intron | intron:Solyc05g051880.2.1.4 | SL2.50ch05:62286070..62286169 | n/a | - | n/a |
| intron | intron:Solyc05g051880.2.1.5 | SL2.50ch05:62285528..62285973 | n/a | - | n/a |
| intron | intron:Solyc05g051880.2.1.6 | SL2.50ch05:62285303..62285470 | n/a | - | n/a |
| intron | intron:Solyc05g051880.2.1.7 | SL2.50ch05:62284610..62285200 | n/a | - | n/a |
| intron | intron:Solyc05g051880.2.1.8 | SL2.50ch05:62284351..62284461 | n/a | - | n/a |
| intron | intron:Solyc05g051880.2.1.9 | SL2.50ch05:62283597..62284279 | n/a | - | n/a |
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