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Solanum lycopersicum mRNA Solyc05g053550.2.1

mRNA details  
Name
Solyc05g053550.2.1
Type
mRNA
Length
1,861
Organism
Solanum lycopersicum
Description
Chalcone synthase (AHRD V1 ***- C5IWS6_NICAL); contains Interpro domain(s) IPR011141 Polyketide synthase, type III
Location(s)
SL2.50ch05:63633052..63635193
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008415
  • GO:0008152
  • GO:0009058
Length
2142
Nb exon
2
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g053550.2.1 Chalcone synthase (AHRD V1 ***- C5IWS6_NICAL); contains Interpro domain(s) IPR011141 Polyketide synthase, type III

AACACAAGCCATTTTCTCTTCTTCACTTGCTAAAATTTGTATAATATTTTTTGTATTTTCATATACATAAATCTTAGTAAAAAAAAAAAAAAACCGCGAAAATGGTCACCGTTGAGGAGGTTCGAAGGGCGCAACGTGCAAAGGGACCAGCTACTATCATGGCCATAGGCACGGCGACTCCTTCGAACTGTGTTGATCAAAGCACTTATCCTGATTATTATTTTCGAATCACTAATAGTGAACATATGACTGAGCTTAAGGAGAAATTTAAGCGCATGTGTGATAAATCGATGATTAATAAGAGATATATGCATTTAACTGAAGAAATTTTAAAAGAAAACCCAAATATTTGTGAATACATGGCTCCTTCTTTGGATGCTAGACAAGATATAGTGGTGGTTGAAGTGCCAAAACTTGGCAAAGAAGCAGCCCAAAAGGCCATTAAAGAATGGGGTCAGCCCAAGTCCAAGATCACCCATGTGGTCTTTTGCACCACTAGTGGGGTGGACATGCCTGGGGCCGACTACCAACTCACCAAGCTTCTTGGGCTTCGACCTTCGGTTAAGCGGCTCATGATGTATCAACAAGGTTGCTTTGCTGGTGGGACCGTTATCCGACTGGCAAAGGACTTAGCTGAGAACAACAAGGGTGCTCGAGTTCTTGTTGTTTGCTCAGAGATCACTGCAGTTACTTTTCGTGGTCCAAGTGATACTCATTTGGATAGTATGGTTGGACAAGCCCTTTTTGGTGATGGGGCAGCCGCAATGATTATAGGTTCAGATCCATTACCAGAAGTTGAAAGGCCTTTGTTTGAACTCGTCTCTGCAGCCCAAACTCTACTCCCTGATAGCGAAGGTGCTATTGATGGTCACCTTCGCGAAGTTGGGCTAACATTTCACTTGCTCAAAGATGTTCCTGGATTGATCTCGAAAAACATTGAAAAGAGTTTAATTGAAGCATTCCAACCGTTAGGCATTTCTGATTGGAATTCCATCTTTTGGATCGCGCACCCTGGTGGGCCGGCGATTCTAGATCAAGTTGAACTAAAACTGAGCCTAAAGCCCGAAAAACTTCGGGCTACTAGGCAAGTTTTAAGTGACTATGGAAATATGTCTAGTGCTTGTGTTCTATTTATTTTAGATGAAATGAGAAAGGCCTCATCCAAAGAAGGGCTTAGTACCACAGGTGAAGGCCTTGATTGGGGTGTACTTTTTGGATTTGGGCCTGGGCTTACTGTTGAGACTGTTGTGCTCCATAGTGTGTCTACTTAGTATATAATATTACTAAAGGGGGTTATAAGTTAAATAGATTATCTATGTAATCTTATATTATATTTCTTATATTTGGTGTATCATGTATTTATTTTGTTTTCAATTGAACTTTGTAATGCATAATGTGTGTAAGAAAAAGTTCATTTCCCCTTGATCTCTTGTCTTTCTTGATATTATTTTTTGTCCATAGCAAAGTTTCTAAAATCTAGCTTAAAAGATAAGTTGTTAAATTAAGAGGAGATAATTTAACTGAATGATACGTTTCTATATTTTGTTAATAAGAAGTATAATTATATTAATTGGCTCCCACTCGAGACATAAATAAAGATATGGATATTTTTTCATGATTTTTTATACGTTTTCTATTTCATTATATGATACTGTTTAGCTTGATACAAAATTTAAAAAAAAGAAGAAAGAATTTGGAAATTAGATTTGTGGTCTAAAATACAACTTAGGTATTTATGTAGCAACAAATCAGTTTATTAAATGTAAAAAAAAAAATGATGTTTGATTCTTTTTAATTATAAAAATGTAATATTTTTTTTTAATTAAAAAAAGTATGTTATATAAGCTTAGAAAGAGGGAGT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g053550.2.1SL2.50ch05:63633152..63634603390+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g053550.2SL2.50ch05:63633052..636351932,142+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g053550.2.1.1SL2.50ch05:63633052..63633330279+n/a
exonexon:Solyc05g053550.2.1.2SL2.50ch05:63633612..636351931,582+n/a
intronintron:Solyc05g053550.2.1.1SL2.50ch05:63633331..63633611n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17832121%2Fdetails feature 17832121
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