Solanum lycopersicum mRNA Solyc05g055240.2.1
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Name | Type |
Length
901
|
Organism |
Description
Myb family transcription factor (AHRD V1 **** D7MR44_ARALY); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF class
|
Location(s)
SL2.50ch05:64968899..64972370
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Ontology term(s) |
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0003677
- Length
- 3472
- Sifter term
- GO:0003700
![]() | spliced mRNA sequence, including UTRs |
>Solyc05g055240.2.1 Myb family transcription factor (AHRD V1 **** D7MR44_ARALY); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF class
TGAAAAAAAAAAACACATTTTCTCTTTTAGTCCTCCTCTTTTAGCCATTCTGTCATTTACACAAAAAAAAAATCCCAATCGGCGATTCAATGTCGACATGGACGAGGGACGACGACAAGCTCTTCGAACACGGCCTGGTTTTGTACCCTGAGAACAGCGCCGACCGGTGGCAATTGATCGCCGATCATGTCCCCGGGAAAACAGCCGACGATATCATGGCTCATTACGATGACCTTGTTCACGATGTATATGAAATTGATTCGGGTCGGATTGATCTACCGAGCTATACGGATGATCCGGTTGAATTGGAAGGCGATTGTCAGATTACATCGGGGTCAAACAAGAAGAGTAATGAAATTGAGAGGAAAAAGGGTACACCATGGACTGAAGATGAACACAGGTTATTCCTTATCGGGCTGGACAAATACGGGAAGGGTGACTGGAGAAGCATTTCAAGAAACGTAGTGGTATCAAGGACACCAACACAAGTGGCTAGTCATGCTCAAAAATACTTCATTAGACAACAGGCAATGAAGAAAGAACGGAAAAGGTCAAGCATCCATGATATTACAACTGCAGTGGATACCAACCCAGTGCCTCCTCAAAGCAGCTTTCAAAACCAAAGTGGCAGTCAAAATTTCAACTTCGCGATGTAGCTGGAAACAAAAAAGAACAATCATACCTGTACATAGACGAACCACCTGCAATCAAATGCTCGAACTTGTAAAGTTTATTGTACTTTCTAGTTGACAGTTGATTTTAGTTAGTGAATCCAGGAGCTTAAAGATCGATCTTTGGTCTTTTTTCTCAAGATGAAATTGTTGGCAAAATGGTTGAAGAACATAATATTGTTAAACGTTTCTAGCCATAATGTATTTGTTTAGTAGTTTGTGTGTTTCTG
TGAAAAAAAAAAACACATTTTCTCTTTTAGTCCTCCTCTTTTAGCCATTCTGTCATTTACACAAAAAAAAAATCCCAATCGGCGATTCAATGTCGACATGGACGAGGGACGACGACAAGCTCTTCGAACACGGCCTGGTTTTGTACCCTGAGAACAGCGCCGACCGGTGGCAATTGATCGCCGATCATGTCCCCGGGAAAACAGCCGACGATATCATGGCTCATTACGATGACCTTGTTCACGATGTATATGAAATTGATTCGGGTCGGATTGATCTACCGAGCTATACGGATGATCCGGTTGAATTGGAAGGCGATTGTCAGATTACATCGGGGTCAAACAAGAAGAGTAATGAAATTGAGAGGAAAAAGGGTACACCATGGACTGAAGATGAACACAGGTTATTCCTTATCGGGCTGGACAAATACGGGAAGGGTGACTGGAGAAGCATTTCAAGAAACGTAGTGGTATCAAGGACACCAACACAAGTGGCTAGTCATGCTCAAAAATACTTCATTAGACAACAGGCAATGAAGAAAGAACGGAAAAGGTCAAGCATCCATGATATTACAACTGCAGTGGATACCAACCCAGTGCCTCCTCAAAGCAGCTTTCAAAACCAAAGTGGCAGTCAAAATTTCAACTTCGCGATGTAGCTGGAAACAAAAAAGAACAATCATACCTGTACATAGACGAACCACCTGCAATCAAATGCTCGAACTTGTAAAGTTTATTGTACTTTCTAGTTGACAGTTGATTTTAGTTAGTGAATCCAGGAGCTTAAAGATCGATCTTTGGTCTTTTTTCTCAAGATGAAATTGTTGGCAAAATGGTTGAAGAACATAATATTGTTAAACGTTTCTAGCCATAATGTATTTGTTTAGTAGTTTGTGTGTTTCTG
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc05g055240.2.1 | SL2.50ch05:64968987..64972125 | 189 | + | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc05g055240.2 | SL2.50ch05:64968899..64972370 | 3,472 | + | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc05g055240.2.1.1 | SL2.50ch05:64968899..64969298 | 400 | + | n/a |
exon | exon:Solyc05g055240.2.1.2 | SL2.50ch05:64971870..64972370 | 501 | + | n/a |
intron | intron:Solyc05g055240.2.1.1 | SL2.50ch05:64969299..64971869 | n/a | + | n/a |
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