Solanum lycopersicum mRNA Solyc05g055750.2.1
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Name | Type |
Length
1,808
|
Organism |
Description
WRKY transcription factor-a (AHRD V1 *-** Q1XD53_CAPAN); contains Interpro domain(s) IPR003657 DNA-binding WRKY
|
Location(s)
SL2.50ch05:65264002..65267417
|
Ontology term(s) |
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0045449
- Length
- 3416
- Sifter term
- GO:0005515
- GO:0003700
![]() | spliced mRNA sequence, including UTRs |
>Solyc05g055750.2.1 WRKY transcription factor-a (AHRD V1 *-** Q1XD53_CAPAN); contains Interpro domain(s) IPR003657 DNA-binding WRKY
ACTCAACAAGAATTTGTGAAAATTTTTAAGTTAATCAAAATAAATGTTTAGTGAAAATTCCTCTTAATTAGTAGTAATAATAAGCCTAGCATTTGTTGAATGCTAGGCAACCAAATGTGATTTTTTTTGAGGCAAACAAGTTGACGTAGTGACATTTTTGAGACAGACAATATGAGCAAACTTCTCTTAATTTATTTGGGATTGAAGCGATGTTATTGTTATTGCTGGTGAACGTTTATTTACGAGTTTCTAGTGATATTATTTTCGTTTACCGGCCACGTCATCATCATCGCCACCTTGCCGGATGGATTTTCTGACGATACCTCCCGGCATTAGTCCGGCGGCATTGCTTGATTCTCCGTTCATGCAACCAACTTCACTGACACCAACTAAGAATGTTGGAGAAATATTGAATTGTATTGAATCAAGAAAGAATGAAGAAGAATTTAGCAAGAAACAAAACCAACAATATGAGCAGAGAGGCATATATAATAGTGCTAACAATTCATCAGATGATGGATATACATGGAGAAAATATGGACAAAAGCAAGTTAAAGGGAGTAATTTTCCAAGAAGTTACTATAAATGTACTGAACCAAAGTGTCTAGTGAGGAAAAAAGTTGAGTCTGCACCAAATGGACATGTTATAGAAATTGTCTACAATGGTGCTCATACTCATCCGAAAACTCGACGAAAAACTAGTGATGTTGTTGCACAACAAAATGGATCATCATCATCATCTGATTTATTATGGAGAAATGATCAGTACAGTAGAGATGTTGCAGCAGCACTAGAACCTGTCATCTCTGATGCCTCCGATTCAATGTTGTCCAACAATATCAATAACGTCTTTGAATCTAATGACATTTCCTCTAAACTTACTACATTTGATGCTGAAAATGAACATTTAGCCACTCATTTTCTTGGTGATGGTATCAATCAGTATGAATTCGAGACTAAAAGAAGGAAGAAAGACGGTTATTTAGCTGAACCAAGTTCACTGTCGAGAACAGTGAGAGAACCAAAAGTAGTCCTACAGGTGGCGAGTGAAATTGATATTCTTGAAGATGGCTATCGCTGGAGAAAATATGGCCAGAAAGTTGTCAAAGGAAACCCGAACCCCAGGAGCTACTACAAATGTACGAGTGGTGGATGCACAGTGAGGAAACACGTCGAAAGGGCAGCAGATGACTTCAAATCAGTAATCACAACATATGAAGGGAAACATAACCATGAAGTGCCATCAACAAACAAGACGAATGGTGTTTCAGGAAATGTTCGTTCAGCATCTATGTTAAACAACGGGCAACAGCCTTGCACAACAACATCTCGTAAAAGTCTCAAAGATTCAAATACGAGAGTGCAATTTCAAGATCTACCAATTCCATTCGAAAGAAAGCATTTCATGGGAAGCGAATATTTAAGGCCAAGTTACCTCGGGGACTTGAGTTACGGAGCTACTTCTTTACAACTCCCAGACTTCCCATTACCATTGCCATTGCCATCGCGAATGAGCTTTCCTGCAAGACAGAACGAATCTCACTTTCATTTGAATACCAATTTCTTACTGCCAAATGGTGCATCCAATTCTTTTTTAGCAGATGGGAGTACACAAAATATTCACGGTGACAACAATAATTCAAGACTCGTCAAAGCCAAAGACGAGATTCAGTACTGGACCTAGCTCTTCCGCTAGCTGTCTTCTGATACATCATTCAGTATAGATTCTTTGCAGTCACTGCTTTCGACTTAAATAATACACACACAGTTCGACGTTTAGAAATATATATGTATTTATCCCCTTTGAT
ACTCAACAAGAATTTGTGAAAATTTTTAAGTTAATCAAAATAAATGTTTAGTGAAAATTCCTCTTAATTAGTAGTAATAATAAGCCTAGCATTTGTTGAATGCTAGGCAACCAAATGTGATTTTTTTTGAGGCAAACAAGTTGACGTAGTGACATTTTTGAGACAGACAATATGAGCAAACTTCTCTTAATTTATTTGGGATTGAAGCGATGTTATTGTTATTGCTGGTGAACGTTTATTTACGAGTTTCTAGTGATATTATTTTCGTTTACCGGCCACGTCATCATCATCGCCACCTTGCCGGATGGATTTTCTGACGATACCTCCCGGCATTAGTCCGGCGGCATTGCTTGATTCTCCGTTCATGCAACCAACTTCACTGACACCAACTAAGAATGTTGGAGAAATATTGAATTGTATTGAATCAAGAAAGAATGAAGAAGAATTTAGCAAGAAACAAAACCAACAATATGAGCAGAGAGGCATATATAATAGTGCTAACAATTCATCAGATGATGGATATACATGGAGAAAATATGGACAAAAGCAAGTTAAAGGGAGTAATTTTCCAAGAAGTTACTATAAATGTACTGAACCAAAGTGTCTAGTGAGGAAAAAAGTTGAGTCTGCACCAAATGGACATGTTATAGAAATTGTCTACAATGGTGCTCATACTCATCCGAAAACTCGACGAAAAACTAGTGATGTTGTTGCACAACAAAATGGATCATCATCATCATCTGATTTATTATGGAGAAATGATCAGTACAGTAGAGATGTTGCAGCAGCACTAGAACCTGTCATCTCTGATGCCTCCGATTCAATGTTGTCCAACAATATCAATAACGTCTTTGAATCTAATGACATTTCCTCTAAACTTACTACATTTGATGCTGAAAATGAACATTTAGCCACTCATTTTCTTGGTGATGGTATCAATCAGTATGAATTCGAGACTAAAAGAAGGAAGAAAGACGGTTATTTAGCTGAACCAAGTTCACTGTCGAGAACAGTGAGAGAACCAAAAGTAGTCCTACAGGTGGCGAGTGAAATTGATATTCTTGAAGATGGCTATCGCTGGAGAAAATATGGCCAGAAAGTTGTCAAAGGAAACCCGAACCCCAGGAGCTACTACAAATGTACGAGTGGTGGATGCACAGTGAGGAAACACGTCGAAAGGGCAGCAGATGACTTCAAATCAGTAATCACAACATATGAAGGGAAACATAACCATGAAGTGCCATCAACAAACAAGACGAATGGTGTTTCAGGAAATGTTCGTTCAGCATCTATGTTAAACAACGGGCAACAGCCTTGCACAACAACATCTCGTAAAAGTCTCAAAGATTCAAATACGAGAGTGCAATTTCAAGATCTACCAATTCCATTCGAAAGAAAGCATTTCATGGGAAGCGAATATTTAAGGCCAAGTTACCTCGGGGACTTGAGTTACGGAGCTACTTCTTTACAACTCCCAGACTTCCCATTACCATTGCCATTGCCATCGCGAATGAGCTTTCCTGCAAGACAGAACGAATCTCACTTTCATTTGAATACCAATTTCTTACTGCCAAATGGTGCATCCAATTCTTTTTTAGCAGATGGGAGTACACAAAATATTCACGGTGACAACAATAATTCAAGACTCGTCAAAGCCAAAGACGAGATTCAGTACTGGACCTAGCTCTTCCGCTAGCTGTCTTCTGATACATCATTCAGTATAGATTCTTTGCAGTCACTGCTTTCGACTTAAATAATACACACACAGTTCGACGTTTAGAAATATATATGTATTTATCCCCTTTGAT
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc05g055750.2.1 | SL2.50ch05:65264125..65267025 | 460 | - | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc05g055750.2 | SL2.50ch05:65264002..65267417 | 3,416 | - | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc05g055750.2.1.1 | SL2.50ch05:65267256..65267417 | 162 | - | n/a |
exon | exon:Solyc05g055750.2.1.2 | SL2.50ch05:65266948..65267167 | 220 | - | n/a |
exon | exon:Solyc05g055750.2.1.3 | SL2.50ch05:65265085..65265668 | 584 | - | 1 |
exon | exon:Solyc05g055750.2.1.4 | SL2.50ch05:65264777..65264935 | 159 | - | 1 |
exon | exon:Solyc05g055750.2.1.5 | SL2.50ch05:65264002..65264684 | 683 | - | n/a |
intron | intron:Solyc05g055750.2.1.2 | SL2.50ch05:65267168..65267255 | n/a | - | n/a |
intron | intron:Solyc05g055750.2.1.3 | SL2.50ch05:65265669..65266947 | n/a | - | n/a |
intron | intron:Solyc05g055750.2.1.4 | SL2.50ch05:65264936..65265084 | n/a | - | n/a |
intron | intron:Solyc05g055750.2.1.5 | SL2.50ch05:65264685..65264776 | n/a | - | n/a |
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