Solanum lycopersicum mRNA Solyc06g005150.2.1

mRNA details  
Name
Solyc06g005150.2.1
Type
mRNA
Length
1,113
Organism
Solanum lycopersicum
Description
Ascorbate peroxidase (AHRD V1 ***- Q52QQ4_SOLLC); contains Interpro domain(s) IPR019793 Peroxidases heam-ligand binding site IPR019794 Peroxidase, active site IPR002016 Haem peroxidase, plant/fungal/bacterial
Location(s)
SL2.50ch06:170218..173338
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0055114
Length
3121
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g005150.2.1 Ascorbate peroxidase (AHRD V1 ***- Q52QQ4_SOLLC); contains Interpro domain(s) IPR019793 Peroxidases heam-ligand binding site IPR019794 Peroxidase, active site IPR002016 Haem peroxidase, plant/fungal/bacterial

CATTCCAGTGTTGTACACACACTCTCTCTCTAGGGTTTATCATTTTTGCCTTTCTCTCTCTTCAGATCAACTACTATGGGCAAGTCCTATCCCACTGTGAGCGCAGAGTACCTCAAGGCCGTTGACAAATGTAAAAGGAAACTCAGAGCACTCATTGCTGAGAAGAATTGTGCTCCTATTATGCTTCGTCTTGCATGGCACTCTGCTGGTACCTATGATGTGTGTTCCAAAACTGGTGGTCCTTTTGGTACCATGAGGTTCAAAGCTGAGCAAGCTCATGGTGCAAACAATGGTCTTGACATTGCTCTCAGACTCTTGGAGCCCATTAGGGAGCAGTTTCCCACTCTCTCCCATGCTGATTTCCATCAATTGGCTGGTGTTGTTGCTGTTGAAGTTACGGGAGGACCTGATGTTCCCTTTCACCCTGGCAGAGAGGACAAACCAGAACCACCTGTTGAAGGTCGCTTGCCTGATGCCACCAAGGGCTGTGACCACTTGAGGGACGTGTTTGTGAAACAAATGGGTCTTTCTGACAAGGATATTGTTGCACTCTCTGGTGCCCATACCTTGGGAAGATGCCACAAGGAGCGTTCTGGTTTTGAGGGACCTTGGACCGCCAATCCCCTTATCTTTGACAACTCATACTTTACGGAGCTTTTGAGTGGGGAAAAGGAAGGGCTCTTACAGTTGCCATCAGACAAAGCTCTCCTCAGTGATCCTGCTTTCCGCCCCCTTGTTGAGAAATATGCTGCGGATGAAGATGCCTTCTTTGCTGACTATGCTAAGGCTCACTTGACACTCTCTGAATTGGGATTTGCTGAAGCTTAAAATGGTGACGGGAAGAGTTGGGAGGGTGGTGACATATTTTGCTTTTGTTTCAATTCTGAAAAGCTTGCTGGAATTGTTGGATATCGTTAGGCTTTTTAATAAGTTTCATTTTCTTTTTTGATAATTCTCCAGCTGGTACTTTGATACTTATTTTGCTAAACTTGTTACTTTTAGGAAAGAAATGAAAGATGGGAAGTTATGCACTTCAAATTGTTGTATCTACAGTGCAGCAAAATTGCGATTTTCTTAATCCTTTCTTTTGTCACAAAGTACTGTCTATAAGAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g005150.2.1SL2.50ch06:170502..172406251-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g005150.2SL2.50ch06:170218..1733383,121-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g005150.2.1.1SL2.50ch06:173274..17333865-n/a
exonexon:Solyc06g005150.2.1.10SL2.50ch06:170218..170518301-n/a
exonexon:Solyc06g005150.2.1.2SL2.50ch06:172288..172416129-1
exonexon:Solyc06g005150.2.1.3SL2.50ch06:171911..172085175-n/a
exonexon:Solyc06g005150.2.1.4SL2.50ch06:171772..17183766-n/a
exonexon:Solyc06g005150.2.1.5SL2.50ch06:171344..17139249-2
exonexon:Solyc06g005150.2.1.6SL2.50ch06:171146..17123186-n/a
exonexon:Solyc06g005150.2.1.7SL2.50ch06:170980..17105980-1
exonexon:Solyc06g005150.2.1.8SL2.50ch06:170763..170865103-n/a
exonexon:Solyc06g005150.2.1.9SL2.50ch06:170624..17068259-1
intronintron:Solyc06g005150.2.1.10SL2.50ch06:170519..170623n/a-n/a
intronintron:Solyc06g005150.2.1.2SL2.50ch06:172417..173273n/a-n/a
intronintron:Solyc06g005150.2.1.3SL2.50ch06:172086..172287n/a-n/a
intronintron:Solyc06g005150.2.1.4SL2.50ch06:171838..171910n/a-n/a
intronintron:Solyc06g005150.2.1.5SL2.50ch06:171393..171771n/a-n/a
intronintron:Solyc06g005150.2.1.6SL2.50ch06:171232..171343n/a-n/a
intronintron:Solyc06g005150.2.1.7SL2.50ch06:171060..171145n/a-n/a
intronintron:Solyc06g005150.2.1.8SL2.50ch06:170866..170979n/a-n/a
intronintron:Solyc06g005150.2.1.9SL2.50ch06:170683..170762n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17835900%2Fdetails feature 17835900
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)