Solanum lycopersicum mRNA Solyc06g008030.2.1

mRNA details  
Name
Solyc06g008030.2.1
Type
mRNA
Length
1,678
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch06:1865425..1869982
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4558
Nb exon
7
Sifter term
  • GO:0003700
  • GO:0010313
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g008030.2.1 BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

GTGAAAACTAAAACACAGAGATATTTATAACAAGTCAAAAACTACTAAAACAGTTCTCATGGAGAGCAAAACTCAAAATGAGTTCATGAATAAATCTCAAGTGAGTTTCTGATGATATAATTCAATTAAACTCACAAAGATGAATTACTGTGTTGTTCCTGATTTCAAAATGGATGATGATTATTATGATATTCCTTCTGCTATTTTCAACAAGAAATCCACAATAGCAGATGAAGAAATCATGGAGCTAGTATGGCAAAATGGTGGAGTAATTATGCAAAGCCAAAATCAAAGATCTGTAAGGAAATCTAACCTTTTTCCCGAGCAATCAGCTGTAGAACAAACGGTAGCAGTTTCAGCTCCACTGTATATGCAAGAGGATGAAATGAACTCATGGCTTCAATCTCCACTTGATGATTCCTCCTTCGATGATTTTCTAAATACTACACCGAGTTGTGACGCCGTGACCTCCGCCGCTGCAGCACCGCCGGGAGAAATTGGTACTTCGAAGGTGGAGATCCGTCCGCCTCTGGTTCCGCCGTGTTCGCGGCCGATTAGATGTACAGAGGGTGAATTACCACATCGATTACAGAATTTTGGGCATTTTTCACGGTTGTCTGGTGAAGCGGTTTTACGAAATGGTACTACATCGAGTTCTGGTCACTCAGTTAGGGCATCGACGATTGTGGATTCAAACGAGACTCCGGTAGCAGCACGCGTATCAGAAAATGTAACACCAGTTACCGCCATGAATGTCAGAGGAAGAGAACTGACGGCGACGTCGATGGCGACAACAAGCGGCGGTAGGGAAGTGACGATGGCATGCGAGTTGGCATTGACAGCATCTACACGTGGTTCAGGAGGTAGTGTAAGCGCCAGAGCAGGACCGCCACAGCCGTCGCATACGGAGGCGGATACGGCGGCGTATGATCGGAAACGGAAAAGTAGAGAATCGGACGACAATGAAGGTCAGAGTGAGGATGTTGAATATGAGTTTGCTGATGCAAGGAAGCAAGTAAGAAGTTCTACATCGGCAAAGAAATCTCGCGCAGCAGAGGTCCATAATCTTTCTGAAAGGAAACGCCGAGACAGAATAAATGAGAAGATGAAGGCTCTACAAGAACTCATACCTTGCTGCAATAAGTCAGACAAAGCTTCAATGCTGGATGAAGCAATTGAGTACCTTAAATCATTGCAATTGCAAGTACAGATGATGGCCACGGGATGCAGCATGGTTCCTATGATGTATCCTGGAATCCCGCAATACATGCCAACTATGGGAATGAATATGAGCATGGGGATGGATATGAAAATGGGCAGGAACCGGCCATTAATTTCATATCCACCGCTAATGCCAGGTCCAGCAATGCAGAATGCAGCTGCAGCAGCACAAATGGCTCCTCAATATCCTCTTCCGGCATATCACTTGCCACCATTTCCTGCACCTGATCCATCCAGAATCCCAGTTGCGAACCAGCCAAACTCACATGTTGGACATAATATTAGTCAGCCAAGACTTCCCAATTTTAGTGACCCATACTATCAATATTTTGGTCTACAGCAAGCACAACTGATGTTACCCCAGAATCAGGAAGTGGAACAGCTGAGCAGCAGTAAACTTAACAGCTGCATAGAAGGAAGTAGAGGGAATCATCAATCTGGTGAGCATACTATTTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g008030.2.1SL2.50ch06:1865424..1869843513-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g008030.2SL2.50ch06:1865425..18699824,558-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g008030.2.1.1SL2.50ch06:1869758..1869982225-n/a
exonexon:Solyc06g008030.2.1.2SL2.50ch06:1868485..1869238754-1
exonexon:Solyc06g008030.2.1.3SL2.50ch06:1867614..186771299-n/a
exonexon:Solyc06g008030.2.1.4SL2.50ch06:1867467..186753266-n/a
exonexon:Solyc06g008030.2.1.5SL2.50ch06:1867318..186738366-n/a
exonexon:Solyc06g008030.2.1.6SL2.50ch06:1865970..1866344375-n/a
exonexon:Solyc06g008030.2.1.7SL2.50ch06:1865425..186551793-n/a
intronintron:Solyc06g008030.2.1.2SL2.50ch06:1869239..1869757n/a-n/a
intronintron:Solyc06g008030.2.1.3SL2.50ch06:1867713..1868484n/a-n/a
intronintron:Solyc06g008030.2.1.4SL2.50ch06:1867533..1867613n/a-n/a
intronintron:Solyc06g008030.2.1.5SL2.50ch06:1867384..1867466n/a-n/a
intronintron:Solyc06g008030.2.1.6SL2.50ch06:1866345..1867317n/a-n/a
intronintron:Solyc06g008030.2.1.7SL2.50ch06:1865518..1865969n/a-n/a
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Related viewsNone found
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