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Solanum lycopersicum mRNA Solyc06g008590.2.1

mRNA details  
Name
Solyc06g008590.2.1
Type
mRNA
Length
966
Organism
Solanum lycopersicum
Description
Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein
Location(s)
SL2.50ch06:2498340..2501460
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0046983
Length
3121
Nb exon
5
Sifter term
  • GO:0005515
  • GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g008590.2.1 Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein

TCTAGTTGCTAGTTTATCTCCTTTCTCTCCACCCTATATATTTTTAACTCTCACTTTTCTATCTCAAACCAAAAGTACTCTTAAAAAAAATAACAAAAAATGAGTAGTAATAAGTTGGATTTTGAGGAGACAGAATTAAGGCTAGGGTTGCCTGGTGGAGCAAGAAAAAATGTTTATGGTGATAATGATACTTGTAATGTTAATGGTAAAAGAGGCTTTGTAGATTTGAAGCTTAATCTTTCTTCTGATATTAACAACATCAAGAATTCAACACACAAAACCCCAGCTGCCAAGGCACAAGTTGTGGGTTGGCCGCCCGTAAGGTCCTTTCGAAAGAATATTTTGACTTCTCAAAAGCTTGATCGAGAGAATGATAATATTTTGGTGAAGGTGAGCATGGATGGTGCACCTTACCTTAGGAAAGTGGACTTAAACATGTACAAGAGTTATCAAGAATTATTTGATGCCTTAACCAAGATGTTCAATTCCTTCACTATTGTCCAAGGAATGAAAGATTTCATGCATGAGGGGAAACTGATGGACCTTTTGAATAGTTCTGATTATGTTCCTACCTATGAAGACAAAGATGGTGATTGGATGCTTGTTGGAGATGTCCCATGGGGGATGTTTGTTGATTCTTGCAAACGCTTGCGCATCATGAAAGGAACTGAAGCAATAGGACTAGCACCAAGGGCTATGGAGAAGTGCAAGAACAGAAATGGATGAAATCAAGTTAACCTTTTTAAATGAATTTCATCAATCAAAATTTCATCGATTATAGTAAATGTTTATTCGAATTGAATAGTGTGTTATGTATTAATGCTGCTATTATAAAGTGCTTGTATGTATTAATAATGAGTGTAGCATATTTATTTCTGTAAATGTAATTTATTTAGTGCTATAATATTTCTTATTTAATACAACTCGATAAATCGTTTGTCTAATAATAATTTAGTTTAAGTTGCT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g008590.2.1SL2.50ch06:2498438..2501220209+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g008590.2SL2.50ch06:2498340..25014603,121+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g008590.2.1.1SL2.50ch06:2498340..2498632293+n/a
exonexon:Solyc06g008590.2.1.2SL2.50ch06:2499195..2499400206+n/a
exonexon:Solyc06g008590.2.1.3SL2.50ch06:2500295..2500418124+1
exonexon:Solyc06g008590.2.1.4SL2.50ch06:2500939..250100062+2
exonexon:Solyc06g008590.2.1.5SL2.50ch06:2501180..2501460281+1
intronintron:Solyc06g008590.2.1.1SL2.50ch06:2498633..2499194n/a+n/a
intronintron:Solyc06g008590.2.1.2SL2.50ch06:2499401..2500294n/a+n/a
intronintron:Solyc06g008590.2.1.3SL2.50ch06:2500419..2500938n/a+n/a
intronintron:Solyc06g008590.2.1.4SL2.50ch06:2501001..2501179n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17838438%2Fdetails feature 17838438
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