Solanum lycopersicum mRNA Solyc06g019170.2.1
 mRNA details
|
| Name | Type |
Length
2,595
|
Organism |
|
Description
Gamma-glutamyl phosphate reductase (AHRD V1 ***- D3TQ43_GLOMM); contains Interpro domain(s) IPR005766 Delta l-pyrroline-5-carboxylate synthetase
|
|
Location(s)
SL2.50ch06:17955931..17964972
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0008652
- GO:0008152
- GO:0006561
- GO:0005737
- GO:0055114
- Length
- 9042
- Nb exon
- 20
- Sifter term
- GO:0004349
- GO:0017084
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc06g019170.2.1 Gamma-glutamyl phosphate reductase (AHRD V1 ***- D3TQ43_GLOMM); contains Interpro domain(s) IPR005766 Delta l-pyrroline-5-carboxylate synthetase
CACTCTTATCACTTTTATTCTACTATACTCACTATATACTAAACCCTCAAAGCAGCAGCAGCCAGCCAGCAGAAACATACATACGGGTATTCTTTAACAATGGATTCCGCTGATCCTGCTCGGGCATTTGTAAAGGATGTCAAACGAATCATTATTAAGGTTGGAACTGCCGTGGTTACCCGAGGTGATGGAAGATTAGCACTTGGAAGAATGGGATCACTGTGTGAGCAGATTCGGGAACTTACCTCTCAAGGCTTTGAAGTTATTTTGGTCACCTCAGGTGCTGTTGGTGTTGGCCGTCAGCGCCTTCGATATAGGAAGCTTATTAATAGCAGCTTTGCGGACCTTCAAAAGCCTCAAGGTGATCTTGATGGCAAGGCTTGTGCCGCTGTAGGTCAGAATGGCCTCATGGCTCTGTATGATACGTTGTTCAGTCAGTTGGATGTAACCTCAGCTCAGCTTATGGTGACTGATAATGACTTTAGAGATCCAGATTTTAGGAGACAACTCAATGAAACTGTAAACTCATTGCTCTGTCTAAAAGTTGTACCTATATTTAATGAGAACGATGCTATCAGCACGCGGAAAGCTCCTTATGAGGATTCTTCTGGAATCTTTTGGGATAATGACAGTTTGGCAGCTCTATTGGCTTTGGAGCTAAAAGCTGATCTGCTTGTTTTGTTGAGTGATGTTGAAGGCCTTTACACTGGCCCTCCAACCGATCCACAATCAGAGCTAATTCATACATATGTTAAGGAGAAGCATGAGGGATTGATTACTTTTGGAGACAAGTCTAGAGTTGGAAGAGGTGGTATGACTGCCAAGGTAAAAGCTGCAGTTTATGCGGCTTATGCTGGCATTCCCGTTGTGATAACTAGTGGCTTTGCCAACAATAATATCATTAAAGCACTAGATGGACAACGTGTTGGCACTCTCTTTCATCGTGAAGCCATTAAATGGGCATCAATAGGAGATTTTGATGCTCGAGAGATGGCAGTTTCTGCGAGGGAATGTGCCAGGCGGCTTCAGACCCTCTCTTCTCAAGAAAGGAGTAAAATTTTGCTAGATATAGCTGATGCACTGGAAGCAAAAGAAGAAGAAATCCTGGCTGAAAATGAAGCTGATGTGGCTGCGGCTCAACAAGCTGGATATGAGAATGCTTTGATATCTCGGTTAGCTATGAAACCAGGAAAAATTTCAAGTCTTGCAAACTCAGTCCGTGTGCTTGCTAACATGGATGAGCCAGTTGGCCGCATTTTAAAGAGGACGGAGCTTGCTGATGGAATCATATTGGAGAAAACATCATCTCCATTGGGTGTTCTCCTGATTATATTTGAGTCACGACCTGATGCACTGGTACAGATAGCTTCTCTAGCAGTCCGAAGTGGGAATGGCCTTTTGTTGAAAGGAGGGAAGGAGGCTAAAAGATCGAATGCAATTTTACACAAGGTGATTACCTCATCCATTCCTCCAATTGTTGGTGAAAGACTTATTGGGTTAGTGACTTCTAGAGAAGAGATCCCTGAATTGCTTAAGCTTGATGATGTGATTGATCTTGTTATTCCAAGAGGTAGCAATAAACTTGTTTCTCAAATTAAAGCTGCAACAAAAATTCCTGTTCTTGGCCATGCTGATGGTATTTGCCACGTTTTCATTGATAAGTCTGCTGACTTGGATATGGCCAAACGTATTGTGTTGGATGCAAAAACAGATTACCCAGCAGCCTGCAATGCAATGGAAACACTTCTCGTTCATGAGGATCTGGTGCAAACTGGAGGTCTTAATGACCTGATTCTGGAACTTCAGGAAAAAGGTGTATCTTTGTTTGGTGGACCTAAAGCAAGCTCAGTTCTTAATATTCCTGAAGCAAATTCCTTCCATCATGAATATGGTGCACTGGCTTGCACCGTGGAAATTGTTGAAGATGTGAATACTGCAATAGAGCACATACATCGTCATGGAAGTGCTCACACTGATAGCATCATTACTGAAGACAAAGAAGTTGCTGAACTGTTTTTACGTCAAGTTGACAGTGCTGCTGTACTTCATAATGCAAGCACAAGATTTAGTGATGGGTTCCGCTTTGGACTTGGTGCAGAGGTGGGGATTAGTACAAGTCGCATTCATGCTCGTGGTCCAGTTGGAGTTGAGGGATTGCTGACAACTAGATGGCTTGCAAGGGGATCTGGACAAGTTGTTGATGGTGATAAAGAAATTGTATACACTCACAAAGACCTTAATCTGGAGGCTTGAGAGTAAATGTATGCAAGTATTATTATTGTTAACGTTATTATTATTATTATTATTACTATTATCCTCTTTGGATCTACCTACACTTGGATTTGGTAAAGCGCATTTTGATGCTTATCCTGAGATTTACAAGTGTTTCAGCTGTTGATATTGATTTGTAATGGGAAGAAAAGAGGAACCAGGGGCAGGTGGGTGAAATAATTTTTGTAATTAGCAGAGGTTAATGAAGTTGGTTTACTACTTGGTTGCTCTAGTCAATTAGCTGCCAATTAGTTATTATTAAAACTTCGAATTCTGTACCCCAACAATAAAAACGTTAATGATATTTAATACTACTTTATGGTA
CACTCTTATCACTTTTATTCTACTATACTCACTATATACTAAACCCTCAAAGCAGCAGCAGCCAGCCAGCAGAAACATACATACGGGTATTCTTTAACAATGGATTCCGCTGATCCTGCTCGGGCATTTGTAAAGGATGTCAAACGAATCATTATTAAGGTTGGAACTGCCGTGGTTACCCGAGGTGATGGAAGATTAGCACTTGGAAGAATGGGATCACTGTGTGAGCAGATTCGGGAACTTACCTCTCAAGGCTTTGAAGTTATTTTGGTCACCTCAGGTGCTGTTGGTGTTGGCCGTCAGCGCCTTCGATATAGGAAGCTTATTAATAGCAGCTTTGCGGACCTTCAAAAGCCTCAAGGTGATCTTGATGGCAAGGCTTGTGCCGCTGTAGGTCAGAATGGCCTCATGGCTCTGTATGATACGTTGTTCAGTCAGTTGGATGTAACCTCAGCTCAGCTTATGGTGACTGATAATGACTTTAGAGATCCAGATTTTAGGAGACAACTCAATGAAACTGTAAACTCATTGCTCTGTCTAAAAGTTGTACCTATATTTAATGAGAACGATGCTATCAGCACGCGGAAAGCTCCTTATGAGGATTCTTCTGGAATCTTTTGGGATAATGACAGTTTGGCAGCTCTATTGGCTTTGGAGCTAAAAGCTGATCTGCTTGTTTTGTTGAGTGATGTTGAAGGCCTTTACACTGGCCCTCCAACCGATCCACAATCAGAGCTAATTCATACATATGTTAAGGAGAAGCATGAGGGATTGATTACTTTTGGAGACAAGTCTAGAGTTGGAAGAGGTGGTATGACTGCCAAGGTAAAAGCTGCAGTTTATGCGGCTTATGCTGGCATTCCCGTTGTGATAACTAGTGGCTTTGCCAACAATAATATCATTAAAGCACTAGATGGACAACGTGTTGGCACTCTCTTTCATCGTGAAGCCATTAAATGGGCATCAATAGGAGATTTTGATGCTCGAGAGATGGCAGTTTCTGCGAGGGAATGTGCCAGGCGGCTTCAGACCCTCTCTTCTCAAGAAAGGAGTAAAATTTTGCTAGATATAGCTGATGCACTGGAAGCAAAAGAAGAAGAAATCCTGGCTGAAAATGAAGCTGATGTGGCTGCGGCTCAACAAGCTGGATATGAGAATGCTTTGATATCTCGGTTAGCTATGAAACCAGGAAAAATTTCAAGTCTTGCAAACTCAGTCCGTGTGCTTGCTAACATGGATGAGCCAGTTGGCCGCATTTTAAAGAGGACGGAGCTTGCTGATGGAATCATATTGGAGAAAACATCATCTCCATTGGGTGTTCTCCTGATTATATTTGAGTCACGACCTGATGCACTGGTACAGATAGCTTCTCTAGCAGTCCGAAGTGGGAATGGCCTTTTGTTGAAAGGAGGGAAGGAGGCTAAAAGATCGAATGCAATTTTACACAAGGTGATTACCTCATCCATTCCTCCAATTGTTGGTGAAAGACTTATTGGGTTAGTGACTTCTAGAGAAGAGATCCCTGAATTGCTTAAGCTTGATGATGTGATTGATCTTGTTATTCCAAGAGGTAGCAATAAACTTGTTTCTCAAATTAAAGCTGCAACAAAAATTCCTGTTCTTGGCCATGCTGATGGTATTTGCCACGTTTTCATTGATAAGTCTGCTGACTTGGATATGGCCAAACGTATTGTGTTGGATGCAAAAACAGATTACCCAGCAGCCTGCAATGCAATGGAAACACTTCTCGTTCATGAGGATCTGGTGCAAACTGGAGGTCTTAATGACCTGATTCTGGAACTTCAGGAAAAAGGTGTATCTTTGTTTGGTGGACCTAAAGCAAGCTCAGTTCTTAATATTCCTGAAGCAAATTCCTTCCATCATGAATATGGTGCACTGGCTTGCACCGTGGAAATTGTTGAAGATGTGAATACTGCAATAGAGCACATACATCGTCATGGAAGTGCTCACACTGATAGCATCATTACTGAAGACAAAGAAGTTGCTGAACTGTTTTTACGTCAAGTTGACAGTGCTGCTGTACTTCATAATGCAAGCACAAGATTTAGTGATGGGTTCCGCTTTGGACTTGGTGCAGAGGTGGGGATTAGTACAAGTCGCATTCATGCTCGTGGTCCAGTTGGAGTTGAGGGATTGCTGACAACTAGATGGCTTGCAAGGGGATCTGGACAAGTTGTTGATGGTGATAAAGAAATTGTATACACTCACAAAGACCTTAATCTGGAGGCTTGAGAGTAAATGTATGCAAGTATTATTATTGTTAACGTTATTATTATTATTATTATTACTATTATCCTCTTTGGATCTACCTACACTTGGATTTGGTAAAGCGCATTTTGATGCTTATCCTGAGATTTACAAGTGTTTCAGCTGTTGATATTGATTTGTAATGGGAAGAAAAGAGGAACCAGGGGCAGGTGGGTGAAATAATTTTTGTAATTAGCAGAGGTTAATGAAGTTGGTTTACTACTTGGTTGCTCTAGTCAATTAGCTGCCAATTAGTTATTATTAAAACTTCGAATTCTGTACCCCAACAATAAAAACGTTAATGATATTTAATACTACTTTATGGTA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc06g019170.2.1 | SL2.50ch06:17956272..17964873 | 718 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc06g019170.2 | SL2.50ch06:17955931..17964972 | 9,042 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc06g019170.2.1.1 | SL2.50ch06:17964814..17964972 | 159 | - | n/a |
| exon | exon:Solyc06g019170.2.1.10 | SL2.50ch06:17960461..17960550 | 90 | - | n/a |
| exon | exon:Solyc06g019170.2.1.11 | SL2.50ch06:17960127..17960213 | 87 | - | n/a |
| exon | exon:Solyc06g019170.2.1.12 | SL2.50ch06:17959928..17960014 | 87 | - | n/a |
| exon | exon:Solyc06g019170.2.1.13 | SL2.50ch06:17959758..17959854 | 97 | - | 2 |
| exon | exon:Solyc06g019170.2.1.14 | SL2.50ch06:17959544..17959647 | 104 | - | n/a |
| exon | exon:Solyc06g019170.2.1.15 | SL2.50ch06:17959380..17959455 | 76 | - | 2 |
| exon | exon:Solyc06g019170.2.1.16 | SL2.50ch06:17957638..17957788 | 151 | - | 1 |
| exon | exon:Solyc06g019170.2.1.17 | SL2.50ch06:17957447..17957515 | 69 | - | 1 |
| exon | exon:Solyc06g019170.2.1.18 | SL2.50ch06:17957180..17957246 | 67 | - | n/a |
| exon | exon:Solyc06g019170.2.1.19 | SL2.50ch06:17957022..17957092 | 71 | - | 1 |
| exon | exon:Solyc06g019170.2.1.2 | SL2.50ch06:17964613..17964684 | 72 | - | n/a |
| exon | exon:Solyc06g019170.2.1.20 | SL2.50ch06:17955931..17956354 | 424 | - | n/a |
| exon | exon:Solyc06g019170.2.1.3 | SL2.50ch06:17964441..17964544 | 104 | - | 1 |
| exon | exon:Solyc06g019170.2.1.4 | SL2.50ch06:17964112..17964214 | 103 | - | n/a |
| exon | exon:Solyc06g019170.2.1.5 | SL2.50ch06:17963811..17963972 | 162 | - | n/a |
| exon | exon:Solyc06g019170.2.1.6 | SL2.50ch06:17963029..17963306 | 278 | - | 1 |
| exon | exon:Solyc06g019170.2.1.7 | SL2.50ch06:17961645..17961795 | 151 | - | n/a |
| exon | exon:Solyc06g019170.2.1.8 | SL2.50ch06:17961392..17961556 | 165 | - | n/a |
| exon | exon:Solyc06g019170.2.1.9 | SL2.50ch06:17961216..17961293 | 78 | - | n/a |
| intron | intron:Solyc06g019170.2.1.10 | SL2.50ch06:17960551..17961215 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.11 | SL2.50ch06:17960214..17960460 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.12 | SL2.50ch06:17960015..17960126 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.13 | SL2.50ch06:17959855..17959927 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.14 | SL2.50ch06:17959648..17959757 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.15 | SL2.50ch06:17959456..17959543 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.16 | SL2.50ch06:17957789..17959379 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.17 | SL2.50ch06:17957516..17957637 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.18 | SL2.50ch06:17957247..17957446 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.19 | SL2.50ch06:17957093..17957179 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.2 | SL2.50ch06:17964685..17964813 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.20 | SL2.50ch06:17956355..17957021 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.3 | SL2.50ch06:17964545..17964612 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.4 | SL2.50ch06:17964215..17964440 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.5 | SL2.50ch06:17963973..17964111 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.6 | SL2.50ch06:17963307..17963810 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.7 | SL2.50ch06:17961796..17963028 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.8 | SL2.50ch06:17961557..17961644 | n/a | - | n/a |
| intron | intron:Solyc06g019170.2.1.9 | SL2.50ch06:17961294..17961391 | n/a | - | n/a |
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