Solanum lycopersicum mRNA Solyc06g035580.2.1

mRNA details  
Name
Solyc06g035580.2.1
Type
mRNA
Length
1,943
Organism
Solanum lycopersicum
Description
Choline dehydrogenase (AHRD V1 ***- C0G363_9RHIZ); contains Interpro domain(s) IPR012132 Glucose-methanol-choline oxidoreductase
Location(s)
SL2.50ch06:24597492..24603412
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0016614
  • GO:0016491
  • GO:0006066
  • GO:0050660
Length
5921
Nb exon
5
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g035580.2.1 Choline dehydrogenase (AHRD V1 ***- C0G363_9RHIZ); contains Interpro domain(s) IPR012132 Glucose-methanol-choline oxidoreductase

TCAATGGTCTCCTAAGAAGATCAACTTGTTATTTCTTTATTTTATTTTATCTATATAACATTTCTTAATTATATATCACACGTCCAAATATAATTCTAGAAATAGAATATGGTTAGCTCATGTTGGAACCCCTTCCTATTTTCATCTTTTTTTGGAATTCTCATTCTTTCCATTCCTTGTTTCTCTGAGAAAGCCCCATATTCGACGTTTGCGAGAGATGCTACGTCATCACCAAAGGTTATTTCGTTCGATTACATCATAATAGGAGGAGGAACTGCTGGTTGTGCATTAGCAGCAACACTCTCACAATCGTTCAATGTTCTGTTATTAGAAAGAGGTGACTTACCCTATGGAAACCCAAACATCACAAACATTAACGGTTTCTCAAGCAACTTAGCTAACATTTCTCCGTCATCTCCCTCGCAACTTTTCATCTCTACAGACGGTGTCTTCAACCACCGTGCTCGCGTCTTAGGTGGTGGTTCAGCTATTAATGCGGGGTTCTTTACGAGGGCGAGTGATGAGTACGTTAAGAAAGTGGGATGGAATGAGAAGTTAGTGAGAGATTCGTATGAATGGGTGGAAAAGAAAGTGGCGTTTGAGCCACAAGTAAAGCAGTGGCAATCTGCCGTGAAGAATGGTTTGTTGGAAGTGGGAGTGAAACCGGATAATGGTTTTACGTATCAACATTTATATGGGACTAAAGTTGGTGGAAGTATATTTGATTCACAAGGACAGAGACATACTGCTGCGGATTTGTTGGAGTATGCTAATCCTACCAAAATTACTCTGCTTTTAAATGCCACTGTCCAACAAATCATGTTCAAACCAGCAGGTGGAGGAATGAAGCCAAGAGCTAATGGAGTTCGTTTTCAAGATTCACAAGGTAATAGTCACTTGGCCTATTTGAAAGAAGGATCCATGAATGAGGTGCTCTTGTCAGCTGGAGCATTAGGAAGCCCACAAATGTTAATGTTGAGTGGTATTGGGCCAGCAGAACAACTACAGGCCCATGGTATCTCTGTGTTATTGGATCAACCCATGGTTGGTATGGGTATGTCTGATAACCCAATGAATGCTGTCATTATTCCTTCTCCTAAACCTGTTGAAGTTTCCCTCATTCAAGTTGTTGGTATTACTGAGTTTGAAAGTTACATTGAAGCTTCGAGTGGGCCTTTGGAGTTGGATTGGTTACGCACAATGGCAAATAATTTTGCAAGGATAGCCAATCAGAGTCTGGATCCATCTGTGCTCAACCGAGGCATTCTAAACAGCCCAATACAAGCAGGTGTAATCCTAGAAAAACTTGCAGGACCATTCTCAAGTGGTTTTCTTCAACTTAGTAGCAAAGATCCAAATGTAAATCCACTAGTAACATTCAACTACTTCAAAGATCCGAGAGACCTACAAAGATGTGTACAAGGCATGAGAACAATAGCAGAGGTTATAGAATCAACATCTTTATTCGATTTTAAATACCCTTTTACAACAGCACAATCTTTATTTAATACAATGTTAACTTTTCCACTCAATTTGCGACCAAGACATTTGAGTGCTTCTGTTTCTTTAGAACAATTTTGTGTCGACACTGTAGTCACCATATGGCATTACCATGGAGGTTGTCAAGTTCGGAAAGTGGTTGATAGAGATTATAAAGTTGTTGGAATTGATGGATTGAGAGTTATTGATGGATCTACATTTATTGAATCACCTGGCACTAATCCTCAAGCCACTGTCATGATGCTTGGAAGGTACATGGGGATGAAGATTTTGAGAGAGAGGCTTGTTGGTGCAAGGAACTAAAACATGTCATTTCGCATTTAATTTGGGGAATAAAAATGTAGAATTTACTATCAATTTTTGTGTATTTTCATTTGACAAAATTTAATAAAACGGAAGGGTCATTATTGTTTCTCTACTCCTGAAACAAAGTTATATTTACC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g035580.2.1SL2.50ch06:24597631..24603304565-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g035580.2SL2.50ch06:24597492..246034125,921-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g035580.2.1.1SL2.50ch06:24603220..24603412193-2
exonexon:Solyc06g035580.2.1.2SL2.50ch06:24602184..24602825642-2
exonexon:Solyc06g035580.2.1.3SL2.50ch06:24600868..24601265398-n/a
exonexon:Solyc06g035580.2.1.4SL2.50ch06:24597762..24598279518-1
exonexon:Solyc06g035580.2.1.5SL2.50ch06:24597492..24597683192-n/a
intronintron:Solyc06g035580.2.1.2SL2.50ch06:24602826..24603219n/a-n/a
intronintron:Solyc06g035580.2.1.3SL2.50ch06:24601266..24602183n/a-n/a
intronintron:Solyc06g035580.2.1.4SL2.50ch06:24598280..24600867n/a-n/a
intronintron:Solyc06g035580.2.1.5SL2.50ch06:24597684..24597761n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17841917%2Fdetails feature 17841917
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)