Solanum lycopersicum mRNA Solyc06g053830.2.1

mRNA details  
Name
Solyc06g053830.2.1
Type
mRNA
Length
1,117
Organism
Solanum lycopersicum
Description
Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein
Location(s)
SL2.50ch06:36689902..36692281
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0046983
Length
2380
Nb exon
5
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g053830.2.1 Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein

TGAGTAATATCTTAAGCTAATCGACATACTCTATATATGTCCACGTGTCACATGTCCATACGCTGGAACTTCATAAGAAAATTGAAATAAATATGCACATAAATCAATGTACATGCACCCCTTATTTTGCTTAGCACTATCCATACATTATTAATCCCAAAACTTTGTGTGAGTACATCTCTCTCTCTATTTTCAATTTCCATAAACCATTGCCCATATAGTATTATTAATTTGTATAGTGGAGAAGAAAAACAAGTAATGGACTTGAAAACTGAGTTATGTTTGGGGCTGCCTGGTGGTGGAGGAGATCACAATATTAAGAAAAGAGGATTTTCTCAAACTGTTGATCTCAAACTCAACCTCCATCATAATGATAATATTCCTTCTATGAACATCAACAATCCTCCAAAGGATAATTCCTCCAACAAGCCACCAACTAAGGCTCAAGTGGTGGGGTGGCCACCAGTAAGATCTTTCAGAAAGAACATGTTGTCTCAAAAAGGGAATAATAATAATAATAATAATGAAGAAATTAGTGAGAAGGATGAAAAAACAATAGCATTTGTGAAGGTTTCCATGGATGGTGCACCTTACCTTCGTAAGGTAGATTTAAAGATGTACAAGAGTTACCAACAACTCTCTCATTCTTTGACCAACATGTTTAGCTCCTTCACTATGGGTAATTATGGGTCCCAAGGAATGATAGATTTTATGAATGAGAGGAAACTGATGGATGTCCTCAATAGTTCTGACTATGTACCAACCTATGAAGATAAGGATGGGGATTGGATGCTTGTTGGAGATGTACCTTGGCAAATGTTTGTTGATTCATGCAAGCGTTTACGCATAATGAAAGGATCAGAAGCTATTGGACTAGCACCAAGAGCCATGGAGAAATGCAAGAACAGGAGCTGAGCAATTAATTTGTTCATGGAGATTCAAAAATGTAGATGAAGAATGAAGCAATCAATTATTTCCATGCTGTCTGTATTTTAAATTATTTTGATAGTTAGTATTTAGTACTATATATAAAATATATAGATAATTATCTTTGGACATTTGTAATTGGACAAGAAGCAATAAACGAAAAAAAATACTATAGTCAGGCTTATTTATT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g053830.2.1SL2.50ch06:36690103..36692023219-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g053830.2SL2.50ch06:36689902..366922812,380-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g053830.2.1.1SL2.50ch06:36691842..36692281440-1
exonexon:Solyc06g053830.2.1.2SL2.50ch06:36691049..36691287239-2
exonexon:Solyc06g053830.2.1.3SL2.50ch06:36690361..36690496136-1
exonexon:Solyc06g053830.2.1.4SL2.50ch06:36690223..3669028462-2
exonexon:Solyc06g053830.2.1.5SL2.50ch06:36689902..36690141240-n/a
intronintron:Solyc06g053830.2.1.2SL2.50ch06:36691288..36691841n/a-n/a
intronintron:Solyc06g053830.2.1.3SL2.50ch06:36690497..36691048n/a-n/a
intronintron:Solyc06g053830.2.1.4SL2.50ch06:36690285..36690360n/a-n/a
intronintron:Solyc06g053830.2.1.5SL2.50ch06:36690142..36690222n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17846621%2Fdetails feature 17846621
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)