Solanum lycopersicum mRNA Solyc06g062800.2.1

mRNA details  
Name
Solyc06g062800.2.1
Type
mRNA
Length
1,449
Organism
Solanum lycopersicum
Description
ATP-dependent RNA helicase eIF4A (AHRD V1 ***- A8PG49_COPC7); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch06:39623259..39626299
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
3041
Nb exon
5
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g062800.2.1 ATP-dependent RNA helicase eIF4A (AHRD V1 ***- A8PG49_COPC7); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

GCTAAGCTCATTCTCACTTTCTTATACAACGCTATTACCGTCGACGTTCCTAATTTTTTACTAATCATCATGGCACGCTTGGCACCAGAAGGAGCTCAATTTGATGCTCGACAGTTCGATTCTAAGATGAATGATTTACTTGCCGCTGAGGGAAAAGATTTCTTTACTTCATATGACGAGGTGTATGACAGTTTCGATGCTATGGGTCTGCAAGAAAATCTTCTCAGGGGCATTTATGCTTATGGTTTTGAGAAACCATCTGCCATTCAGCAGAGGGGTATCGTACCATTTTGCAAGGGACTTGATGTAATTCAGCAAGCTCAATCTGGCACAGGGAAGACAGCTACTTTTTGTTCTGGAATTTTGCAGCAACTTGATTATGGTTTAATTCAATGCCAATCATTGGTGTTGGCACCTACTCGAGAACTTGCACAGCAGATTGAGAAGGTTATGCGAGCACTTGGTGACTATCTTGGGGTTAAGGTCCATGCTTGTGTAGGTGGCACTAGTGTCAGGGAGGATCAACGCATTCTCGCAGCTGGTGTTCATGTTGTTGTTGGCACCCCTGGACGTGTGTTTGACATGTTGCGAAGACAGTCCCTCCGTCCTGATTGCCTCAGAATGTTTGTGCTAGACGAGGCTGATGAAATGCTGTCACGGGGTTTTAAGGATCAGATATATGATATTTTCCAGATGCTGCCTACCAAAGTTCAAGTCGGAGTGTTTTCTGCGACCATGCCACCAGAAGCCCTTGACATCACAAGAAAGTTCATGAATAAGCCTGTGAGAATCTTGGTTAAACGTGATGAATTGACACTTGAGGGTATCAAACAGTTCTACGTCAATGTAGATAAGGAGGAATGGAAGCTTGAGACGCTCTGTGATCTATACGAGACACTTGCCATCACTCAGAGTGTTATCTTTGTGAACACTAGGCGCAAGGTCGATTGGTTGACGGACAAAATGCGAAGCCGTGACCACACGGTTTCAGCTACACATGGAGATATGGACCAGAACACTAGAGACATAATCATGCGTGAGTTTCGCTCTGGTTCTTCCCGTGTCCTTATCACAACTGATCTGTTGGCTCGTGGTATCGATGTACAACAAGTATCCCTTGTTATCAACTATGATCTCCCAACTCAGCCGGAGAATTATCTCCATCGTATTGGAAGAAGTGGAAGGTTTGGAAGGAAAGGAGTTGCGATCAACTTTGTGACAACAGACGACGAAAGAATGTTGTTTGATATTCAAAAATTCTACAATGTGGTCATCGAAGAACTCCCTTCAAACGTCGCTGACCTCCTCTGAAAACTTCATCTTTATAAGGTGAGTACCAAGCTTATAGTATAGAAGAAATCATTTTAAACTACCATTATTATCTATCGTCAAAAACGCACCCCTGGCATTAATGTTGCTAAGAATTTTGCAGTCAGTATGTAGTAAGGT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g062800.2.1SL2.50ch06:39623396..39625535414-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g062800.2SL2.50ch06:39623259..396262993,041-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g062800.2.1.1SL2.50ch06:39626233..3962629967-n/a
exonexon:Solyc06g062800.2.1.2SL2.50ch06:39625468..3962553770-1
exonexon:Solyc06g062800.2.1.3SL2.50ch06:39625230..39625336107-2
exonexon:Solyc06g062800.2.1.4SL2.50ch06:39624458..39624888431-n/a
exonexon:Solyc06g062800.2.1.5SL2.50ch06:39623259..39624032774-n/a
intronintron:Solyc06g062800.2.1.2SL2.50ch06:39625538..39626232n/a-n/a
intronintron:Solyc06g062800.2.1.3SL2.50ch06:39625337..39625467n/a-n/a
intronintron:Solyc06g062800.2.1.4SL2.50ch06:39624889..39625229n/a-n/a
intronintron:Solyc06g062800.2.1.5SL2.50ch06:39624033..39624457n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17849711%2Fdetails feature 17849711
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