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Solanum lycopersicum mRNA Solyc06g063000.2.1

mRNA details  
Name
Solyc06g063000.2.1
Type
mRNA
Length
1,657
Organism
Solanum lycopersicum
Description
Polyadenylate-binding protein (AHRD V1 **** A8N215_COPC7); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plait
Location(s)
SL2.50ch06:39767747..39773238
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0003676
  • GO:0000166
Length
5492
Nb exon
12
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g063000.2.1 Polyadenylate-binding protein (AHRD V1 **** A8N215_COPC7); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plait

TTTTTGGTTTTTCCCTTTGTTCGAGGACCTTCTTTTTCTATTTGCTTAGAGAACCCTACCACCGCGTTCGAAGGGCTGGTGAGTATCTCCTTCTTCGTTTATCAATCGATTGAATCGATCTTTGAAGAAAATGCAGAATCAGAGGCTGAAGCAGCAACAACAGCAAGCTTTGATGCAACAAGCGCTTCTTCAACAACAGTCTCTCTATCATCCTGGCCTCTTAGCTCCTCCTCAGATTGAGCCAATACCTAGTGGGAATCTGCCTCCTGGGTTTGATCCAACCACCTGCCGCAGTGTGTTTGTTGGGAATATTCACCCGCAAGTGACTGAACCTCTTCTTCAGGAAGTTTTCTCTAGTACTGGTCTGGTGGAAGGATGTAAGCTGATAAGGAAGGAAAAGTCATCTTATGGTTTCATCCACTACTATGATCGTAGATCAGCTGCACTTGCTATAGTCACTCTTAATGGAAGGCATCTGTTTGGGCAGCCTATTAAAGTTAATTGGGCATTTGCCAGTGGACAGAGGGAGGACACTTCAAGTCACTTTAATATATTTGTTGGTGATCTGAGCCCTGAAGTTACTGATGCAATGCTATTTGCTTGCTTCTCTGTTTACCCTGGTTGCTCTGATGCAAGGGTAATGTGGGATCAAAAGACTGGGCGTTCTAGAGGTTTTGGTTTTGTTTCTTTCCGTAACCAACAGGATGCTCAAAGTGCCATCAATGATTTAACAGGCAAATGGCTTGGTAGTAGGCAGATACGTTGCAACTGGGCTACCAAAGGTGCTAACTCGAATGATGACAAACAGAGTTCTGATGCCAAAAGTGTTGTGGAATTAACAAATGGTTCATCAGAAGATGGTAAAGAGGCAGCGAATAGTGATGCTCCTGAAAATAACCCACAGTACACCACTGTTTATGTGGGCAATATTGCTCCTGAGGTAACACAGATTGATCTCCATCGCTACTTTCATGCCCTTGGTGCAGGAGTGATAGAGGAAATTCGAATTCAGCGTGATAAAGGATTTGGTTTTGTAAGATACAATACTCATGCTGAGGCAGCTTTAGCGATTCAAATGGGAAATACCCACTCAGTTCTCGGTGGAAGGCAGATTAAGTGTTCGTGGGGCAACAAGCCAACTCCACCTGGAACAACCTCGAACCCACTTCCTCCACCAGCTCCCACACCATTAGGTATTTCGGCCACTGACCTTTTGGCTTATGAGAGACAGCTAGCTATGAGCAAGATGGGTGGTGTCCCGGGCCTCATGGGTCAATATCCTTTGAAGCAAGGATCGATGGGGATGGCCTCTGGAGCAAGCCAAGCTATATATGATGGCGGTTTCCAGAATGTTGCTGCACAACAGCTCATGTATTATCAGTGATGTGGCTCTGGGGTTGTCGTTGCCTTTCTACCTAGTTTACCTTTAATAACGCTTGTTTTTTTCTTTTCATGTTCTCTTTTTTTTTGTTCTTAATATTTAGGCATCATGCCTAGTTAGATGTGAGTGCCACGTGTATCAATACGTATAATGTATGCTTTGTGTCCCAGTTTATTAGTAGGAATGAGGGAATACTACGAGGTTTGCTCCATTATTGTTGTTCATACATGCTTTGATGTTGTGACAGATCTATAACATTTTCTTCTTCTCTAGCAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g063000.2.1SL2.50ch06:39767876..39772965418+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g063000.2SL2.50ch06:39767747..397732385,492+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g063000.2.1.1SL2.50ch06:39767747..39767981235+n/a
exonexon:Solyc06g063000.2.1.10SL2.50ch06:39772191..3977227686+2
exonexon:Solyc06g063000.2.1.11SL2.50ch06:39772445..39772621177+2
exonexon:Solyc06g063000.2.1.12SL2.50ch06:39772699..39773238540+n/a
exonexon:Solyc06g063000.2.1.2SL2.50ch06:39770395..3977045662+n/a
exonexon:Solyc06g063000.2.1.3SL2.50ch06:39770658..39770760103+n/a
exonexon:Solyc06g063000.2.1.4SL2.50ch06:39770887..3977096377+1
exonexon:Solyc06g063000.2.1.5SL2.50ch06:39771035..3977109662+n/a
exonexon:Solyc06g063000.2.1.6SL2.50ch06:39771217..3977130488+1
exonexon:Solyc06g063000.2.1.7SL2.50ch06:39771484..3977155976+2
exonexon:Solyc06g063000.2.1.8SL2.50ch06:39771643..3977167331+1
exonexon:Solyc06g063000.2.1.9SL2.50ch06:39771859..39771978120+n/a
intronintron:Solyc06g063000.2.1.1SL2.50ch06:39767982..39770394n/a+n/a
intronintron:Solyc06g063000.2.1.10SL2.50ch06:39772277..39772444n/a+n/a
intronintron:Solyc06g063000.2.1.11SL2.50ch06:39772622..39772698n/a+n/a
intronintron:Solyc06g063000.2.1.2SL2.50ch06:39770457..39770657n/a+n/a
intronintron:Solyc06g063000.2.1.3SL2.50ch06:39770761..39770886n/a+n/a
intronintron:Solyc06g063000.2.1.4SL2.50ch06:39770964..39771034n/a+n/a
intronintron:Solyc06g063000.2.1.5SL2.50ch06:39771097..39771216n/a+n/a
intronintron:Solyc06g063000.2.1.6SL2.50ch06:39771305..39771483n/a+n/a
intronintron:Solyc06g063000.2.1.7SL2.50ch06:39771560..39771642n/a+n/a
intronintron:Solyc06g063000.2.1.8SL2.50ch06:39771674..39771858n/a+n/a
intronintron:Solyc06g063000.2.1.9SL2.50ch06:39771979..39772190n/a+n/a
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