Solanum lycopersicum mRNA Solyc06g063360.2.1
 mRNA details
|
| Name | Type |
Length
2,575
|
Organism |
|
Description
Receptor like kinase, RLK
|
|
Location(s)
SL2.50ch06:40036694..40046129
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0005515
- GO:0006468
- Length
- 9436
- Nb exon
- 16
- Sifter term
- GO:0004674
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc06g063360.2.1 Receptor like kinase, RLK
CAATGTATTCTTTCGAGAGTCTACAAACAATTTTCTCTTAATAATTTTGATCCTACAGTTTCCCTTCGAGATATCATCACCCTTCGCGCAGAGGCCGATTGGGGAATGTTCTCAACTTGCTCTTCGCGTAGGGAAGCAATGTACAGACTTGGAATCATCACCCTACTCAAATTCCGTGTAGTAGTACTAATTTACTGATTTTCATAATACTGCTGTTTTTGTTGTTGTTTGACAAAGTATTTTAGGTTTTGGGCAATTGATCGCCCAAATATGATGATGATGATAAGTCCGTGCACTTTCCTTTGTTGGATCATCCTTACAAGCTCCTTCAATATTGATGTGGTGCTTTCGAAAACAGATTCCCAGCAAGTTTCAGCCCTCAATGACATGTATCAGTATTTGAAGCCCCATTCCAAACTTGATGGATGGAAATCCAATGGAGGAAATCCTTGTGATGATTCTTGGACGGGTGTCAAGTGTTCCGGTTCAGATGTCACTGAAATTAATCTATCTGGCTTGGGGCTCACTGGATCACTTGGCTTCCAGCTTGATAAGTTGGACAAAGTTACCTACTTTGATGTGAGCAAAAACAACCTAAAGGACAACATACCATACCAACTTCCTCCTCGCACACAACACCTAGATCTTTCTGGAAATCAATTTGGTGGAACTGTACCTTATTCAATTTCTCAGATGACTGAGCTTAAATCTATGAATCTTAATCATAATAAGCTAAGTGGATCACTGAGTGATTTATTTGGAAAACTTACAAAACTTACTGAGATGGATATCTCCTACAATTCAATATCAGGCAGTTTGCCTCAGAGTCTTAAATCCCTCTCAAGCCTCAGCAAATTGCATATACAGAACAATCAGTTTACTGGATCAATAAATGTTCTTGCGGATCTTGAACTTGACGATTTGAATGTAGCAAACAACCAATTTAATGGATGGATTCCGAATGAGCTGAAAGACATCAAAAAATTAGAGACTGGCGGAAATAGTTGGTCTACTGGATCAGCTCCTCCTCCACCTCCTGGGCAGAAAGCTAAACCACACACCAGGAACTCAGATAAGGAATCTGGAAAATCTGGCCTGGGTATAGGGGCCATTGCAGGGATATTATTGGGTGTTTTGTTGCTACTTAGTGTTATAATTGCTCTATTGTCAAGGAAAAAAAGATCATCATCTTCCTCCCATTTTATTGAAGAAGATAAATTTAGCCGACGTCAAACTTTTACTCCTCTTGCATCTCAGGAGTTATCTAGTAGCGTACGTGCCAACATGCAGGAGGACTTCAGAGTTGCAGAGAAACATTTGCAAACCTCTTCCTCAATGGTTCTTAAGCGTCTTAATTCAGAGCGTCACAAGTCTTTTAATGAGAAGGAGATGAAAAATGTTCCACCTTCAGATCATGTCAAGTCGGCCAATGATAAAGAATTCGCAAATCCTATGAAACAGAACAGTTCAGTTAAGTTAGATCATTATCCTTTAGTTGATTTGCAAAATGCAACCAGTAACTTTGCAAGTTCTCGCCTTCTTGGTGAGGGATCAATTGGTCGAGTATACATGGCAAAATATCCGGATGGCAAGGTTCTGGCGGTAAAGAAAATAGACTCCTCCTTTTTCCGAGATGGGCAGTGCACAGAATTCACAGAAATTGTTGGCAATATGTCCAAACTTCACCACACAAATATAGCTGAAGTTATTGGTTATTGTTCAGAGCAGGGACATAATATGTTAATCTTTGAGTATTTTAGAAATGGTTCACTTTATGAATTCCTTCATGTGTCAGATGACTTCAGCAAACCTCTTACATGGAACACAAGAGTCAGAATTGCTCTAGGGGTCGCCCGTGCTCTTGAGTACCTGCATGAGGTTTGTTCTCCATCATGTCTCCACGGCAATATAAGAACTTCAAACATTGTGCTCGATGCTGAATTGAATTCTCGTCTCTGTGAGTGTGGCATGGCAATGTTTCATCAGCGATCAAGCAAAAACTTGGATGCTGGATACACTGCTCCAGAATGCACAAAACCTTCTGCATTTACTTTGAAGAGTGATGTTTATAGCTTCGGAGTTGTCATGTTGGAACTGTTGACAGGGCGAAAGCCTTTTGACAGTTCAAAGCCAAGATTAGAACAGTGTCTGGCCGAATGGGCATCGCCACAACTACATGATCTAGATGCCTTAGAGCAAATGGCTGATCCTGCTCTGCGTGGACTTTATCCTCCTAAATCTCTCTCTAGATTTGCCAATGTGACTGCTCTGTGCGTTCAGCCGGAGCCAGAATTTCGACCACAAATGTCTGAGGTGGTCCGTTTAGTACAAAAGTCGAATATGAGCCAGAGAGGTGATGATGATGATTACTGATATATACTTTCAGGTTCTCGGAGGAAAAAAAAGGAAGAAAATCTTTTCAGACTTGAGAAGACGGGACTCCCATTTTTTTTCTTACTTCATCTTCTCCTTTTAGAAAATCAAGTGTTTTTGGGTAGTGCAAACGCTTTCCAGTACTTTGAAGTCTAGTTGAAAGCAATGATCTGTTTGTCATGGCATATCACGCCAATAGCAG
CAATGTATTCTTTCGAGAGTCTACAAACAATTTTCTCTTAATAATTTTGATCCTACAGTTTCCCTTCGAGATATCATCACCCTTCGCGCAGAGGCCGATTGGGGAATGTTCTCAACTTGCTCTTCGCGTAGGGAAGCAATGTACAGACTTGGAATCATCACCCTACTCAAATTCCGTGTAGTAGTACTAATTTACTGATTTTCATAATACTGCTGTTTTTGTTGTTGTTTGACAAAGTATTTTAGGTTTTGGGCAATTGATCGCCCAAATATGATGATGATGATAAGTCCGTGCACTTTCCTTTGTTGGATCATCCTTACAAGCTCCTTCAATATTGATGTGGTGCTTTCGAAAACAGATTCCCAGCAAGTTTCAGCCCTCAATGACATGTATCAGTATTTGAAGCCCCATTCCAAACTTGATGGATGGAAATCCAATGGAGGAAATCCTTGTGATGATTCTTGGACGGGTGTCAAGTGTTCCGGTTCAGATGTCACTGAAATTAATCTATCTGGCTTGGGGCTCACTGGATCACTTGGCTTCCAGCTTGATAAGTTGGACAAAGTTACCTACTTTGATGTGAGCAAAAACAACCTAAAGGACAACATACCATACCAACTTCCTCCTCGCACACAACACCTAGATCTTTCTGGAAATCAATTTGGTGGAACTGTACCTTATTCAATTTCTCAGATGACTGAGCTTAAATCTATGAATCTTAATCATAATAAGCTAAGTGGATCACTGAGTGATTTATTTGGAAAACTTACAAAACTTACTGAGATGGATATCTCCTACAATTCAATATCAGGCAGTTTGCCTCAGAGTCTTAAATCCCTCTCAAGCCTCAGCAAATTGCATATACAGAACAATCAGTTTACTGGATCAATAAATGTTCTTGCGGATCTTGAACTTGACGATTTGAATGTAGCAAACAACCAATTTAATGGATGGATTCCGAATGAGCTGAAAGACATCAAAAAATTAGAGACTGGCGGAAATAGTTGGTCTACTGGATCAGCTCCTCCTCCACCTCCTGGGCAGAAAGCTAAACCACACACCAGGAACTCAGATAAGGAATCTGGAAAATCTGGCCTGGGTATAGGGGCCATTGCAGGGATATTATTGGGTGTTTTGTTGCTACTTAGTGTTATAATTGCTCTATTGTCAAGGAAAAAAAGATCATCATCTTCCTCCCATTTTATTGAAGAAGATAAATTTAGCCGACGTCAAACTTTTACTCCTCTTGCATCTCAGGAGTTATCTAGTAGCGTACGTGCCAACATGCAGGAGGACTTCAGAGTTGCAGAGAAACATTTGCAAACCTCTTCCTCAATGGTTCTTAAGCGTCTTAATTCAGAGCGTCACAAGTCTTTTAATGAGAAGGAGATGAAAAATGTTCCACCTTCAGATCATGTCAAGTCGGCCAATGATAAAGAATTCGCAAATCCTATGAAACAGAACAGTTCAGTTAAGTTAGATCATTATCCTTTAGTTGATTTGCAAAATGCAACCAGTAACTTTGCAAGTTCTCGCCTTCTTGGTGAGGGATCAATTGGTCGAGTATACATGGCAAAATATCCGGATGGCAAGGTTCTGGCGGTAAAGAAAATAGACTCCTCCTTTTTCCGAGATGGGCAGTGCACAGAATTCACAGAAATTGTTGGCAATATGTCCAAACTTCACCACACAAATATAGCTGAAGTTATTGGTTATTGTTCAGAGCAGGGACATAATATGTTAATCTTTGAGTATTTTAGAAATGGTTCACTTTATGAATTCCTTCATGTGTCAGATGACTTCAGCAAACCTCTTACATGGAACACAAGAGTCAGAATTGCTCTAGGGGTCGCCCGTGCTCTTGAGTACCTGCATGAGGTTTGTTCTCCATCATGTCTCCACGGCAATATAAGAACTTCAAACATTGTGCTCGATGCTGAATTGAATTCTCGTCTCTGTGAGTGTGGCATGGCAATGTTTCATCAGCGATCAAGCAAAAACTTGGATGCTGGATACACTGCTCCAGAATGCACAAAACCTTCTGCATTTACTTTGAAGAGTGATGTTTATAGCTTCGGAGTTGTCATGTTGGAACTGTTGACAGGGCGAAAGCCTTTTGACAGTTCAAAGCCAAGATTAGAACAGTGTCTGGCCGAATGGGCATCGCCACAACTACATGATCTAGATGCCTTAGAGCAAATGGCTGATCCTGCTCTGCGTGGACTTTATCCTCCTAAATCTCTCTCTAGATTTGCCAATGTGACTGCTCTGTGCGTTCAGCCGGAGCCAGAATTTCGACCACAAATGTCTGAGGTGGTCCGTTTAGTACAAAAGTCGAATATGAGCCAGAGAGGTGATGATGATGATTACTGATATATACTTTCAGGTTCTCGGAGGAAAAAAAAGGAAGAAAATCTTTTCAGACTTGAGAAGACGGGACTCCCATTTTTTTTCTTACTTCATCTTCTCCTTTTAGAAAATCAAGTGTTTTTGGGTAGTGCAAACGCTTTCCAGTACTTTGAAGTCTAGTTGAAAGCAATGATCTGTTTGTCATGGCATATCACGCCAATAGCAG
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc06g063360.2.1 | SL2.50ch06:40036895..40045859 | 701 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc06g063360.2 | SL2.50ch06:40036694..40046129 | 9,436 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc06g063360.2.1.1 | SL2.50ch06:40045760..40046129 | 370 | - | 2 |
| exon | exon:Solyc06g063360.2.1.10 | SL2.50ch06:40041966..40042279 | 314 | - | 2 |
| exon | exon:Solyc06g063360.2.1.11 | SL2.50ch06:40040829..40041118 | 290 | - | n/a |
| exon | exon:Solyc06g063360.2.1.12 | SL2.50ch06:40038804..40039075 | 272 | - | 1 |
| exon | exon:Solyc06g063360.2.1.13 | SL2.50ch06:40038446..40038566 | 121 | - | n/a |
| exon | exon:Solyc06g063360.2.1.14 | SL2.50ch06:40037341..40037477 | 137 | - | 1 |
| exon | exon:Solyc06g063360.2.1.15 | SL2.50ch06:40037103..40037259 | 157 | - | n/a |
| exon | exon:Solyc06g063360.2.1.16 | SL2.50ch06:40036694..40036988 | 295 | - | n/a |
| exon | exon:Solyc06g063360.2.1.2 | SL2.50ch06:40045441..40045573 | 133 | - | 1 |
| exon | exon:Solyc06g063360.2.1.3 | SL2.50ch06:40045255..40045326 | 72 | - | 1 |
| exon | exon:Solyc06g063360.2.1.4 | SL2.50ch06:40045078..40045143 | 66 | - | 1 |
| exon | exon:Solyc06g063360.2.1.5 | SL2.50ch06:40044807..40044878 | 72 | - | 1 |
| exon | exon:Solyc06g063360.2.1.6 | SL2.50ch06:40044655..40044726 | 72 | - | 1 |
| exon | exon:Solyc06g063360.2.1.7 | SL2.50ch06:40043225..40043296 | 72 | - | 1 |
| exon | exon:Solyc06g063360.2.1.8 | SL2.50ch06:40043091..40043156 | 66 | - | 1 |
| exon | exon:Solyc06g063360.2.1.9 | SL2.50ch06:40042352..40042417 | 66 | - | 1 |
| intron | intron:Solyc06g063360.2.1.10 | SL2.50ch06:40042280..40042351 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.11 | SL2.50ch06:40041119..40041965 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.12 | SL2.50ch06:40039076..40040828 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.13 | SL2.50ch06:40038567..40038803 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.14 | SL2.50ch06:40037478..40038445 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.15 | SL2.50ch06:40037260..40037340 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.16 | SL2.50ch06:40036989..40037102 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.2 | SL2.50ch06:40045574..40045759 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.3 | SL2.50ch06:40045327..40045440 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.4 | SL2.50ch06:40045144..40045254 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.5 | SL2.50ch06:40044879..40045077 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.6 | SL2.50ch06:40044727..40044806 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.7 | SL2.50ch06:40043297..40044654 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.8 | SL2.50ch06:40043157..40043224 | n/a | - | n/a |
| intron | intron:Solyc06g063360.2.1.9 | SL2.50ch06:40042418..40043090 | n/a | - | n/a |
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