Solanum lycopersicum mRNA Solyc06g064590.1.1
 mRNA details
|
| Name | Type | Organism | |
|
Synonyms / aliases
mRNA:Solyc06g064590.1.1
|
Length
846
|
|
Description
BHLH transcription factor (AHRD V1 *--- Q401N5_9LILI); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
|
|
Location(s)
SL2.50ch06:40250466..40254760
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0005634
- GO:0045449
- Length
- 4295
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc06g064590.1.1 BHLH transcription factor (AHRD V1 *--- Q401N5_9LILI); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
ATGGAAAGTAATTATTACGATTCTTTTCAAGGCATGGAATATAGTGGTAATTATAACTATGAAGATGAGAGCTTCTTTGAATTCAAGCCAAATATTTCTCAAGGTATCTATGATTTATCAAGTGCTTACAACACAAATATTGAAGAAAAAAGTGGTCAAAAGTCAATTTCTTCTAATAATTCTTCCTCTAATTCTGGGGGATTTCTCATTTCATTTTCTTCAAATCAAGAAGAAGATATTGGTGCAATGATAAGCTCAGAAAATTCATGCCAAGAATCATTTTTATTAGGGGAAAATAATAATAACAATAATAATAATAATAATGTTATGTATAAGAGGAGTCCACAACAAGCACAAGATCATGTTATTGCAGAGAGGAAGAGGAGAGAAAAAATGGGAGACCTTTTCATCTCTTTGTCAAAGATTGTACCTGGTCTTAAGAAGTTAGATAAATCATCTATCCTTGGAGATACGATTGAGTACATGAAAGAGCTTCAAGAACAAGTAAAACTTCTTGAAGAGTCAAAGAAAAACACATCATCATCTTTGGAACATAATGATTCTAACAAGGAACAAGTATTAGGATCAAACAAGATTAAGGTAAGGATTATGGACAAAAATGTACTTATTAACATACATTGCAACAAACAAGATGGAATGTTGGGAAGATTGCTAGTCCAAATGGAGCAATTGCATCTTTCAGTCCATGACATGAGGATTATGCCTTTTGGTCCTACTAATCTTGAAATATCACTTCTTGCTCAGATGGAGGATGGATGCTGCATAAATGTAGAGGATATTGTAAAGGCCATCCAAATCAACATCCTGGACCTCGTAAATAATTAA
ATGGAAAGTAATTATTACGATTCTTTTCAAGGCATGGAATATAGTGGTAATTATAACTATGAAGATGAGAGCTTCTTTGAATTCAAGCCAAATATTTCTCAAGGTATCTATGATTTATCAAGTGCTTACAACACAAATATTGAAGAAAAAAGTGGTCAAAAGTCAATTTCTTCTAATAATTCTTCCTCTAATTCTGGGGGATTTCTCATTTCATTTTCTTCAAATCAAGAAGAAGATATTGGTGCAATGATAAGCTCAGAAAATTCATGCCAAGAATCATTTTTATTAGGGGAAAATAATAATAACAATAATAATAATAATAATGTTATGTATAAGAGGAGTCCACAACAAGCACAAGATCATGTTATTGCAGAGAGGAAGAGGAGAGAAAAAATGGGAGACCTTTTCATCTCTTTGTCAAAGATTGTACCTGGTCTTAAGAAGTTAGATAAATCATCTATCCTTGGAGATACGATTGAGTACATGAAAGAGCTTCAAGAACAAGTAAAACTTCTTGAAGAGTCAAAGAAAAACACATCATCATCTTTGGAACATAATGATTCTAACAAGGAACAAGTATTAGGATCAAACAAGATTAAGGTAAGGATTATGGACAAAAATGTACTTATTAACATACATTGCAACAAACAAGATGGAATGTTGGGAAGATTGCTAGTCCAAATGGAGCAATTGCATCTTTCAGTCCATGACATGAGGATTATGCCTTTTGGTCCTACTAATCTTGAAATATCACTTCTTGCTCAGATGGAGGATGGATGCTGCATAAATGTAGAGGATATTGTAAAGGCCATCCAAATCAACATCCTGGACCTCGTAAATAATTAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc06g064590.1.1 | SL2.50ch06:40250465..40254760 | 282 | + | n/a |
Add items to a list:
| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc06g064590.1 | SL2.50ch06:40250466..40254760 | 4,295 | + | n/a |
Add items to a list:
| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc06g064590.1.1.1 | SL2.50ch06:40250466..40250495 | 30 | + | n/a |
| exon | exon:Solyc06g064590.1.1.2 | SL2.50ch06:40250889..40251302 | 414 | + | n/a |
| exon | exon:Solyc06g064590.1.1.3 | SL2.50ch06:40252190..40252510 | 321 | + | n/a |
| exon | exon:Solyc06g064590.1.1.4 | SL2.50ch06:40254680..40254760 | 81 | + | n/a |
| intron | intron:Solyc06g064590.1.1.1 | SL2.50ch06:40250496..40250888 | n/a | + | n/a |
| intron | intron:Solyc06g064590.1.1.2 | SL2.50ch06:40251303..40252189 | n/a | + | n/a |
| intron | intron:Solyc06g064590.1.1.3 | SL2.50ch06:40252511..40254679 | n/a | + | n/a |
Add items to a list:
| Related views |
| User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
Working
