Solanum lycopersicum mRNA Solyc06g064840.2.1

mRNA details  
Name
Solyc06g064840.2.1
Type
mRNA
Length
794
Organism
Solanum lycopersicum
Description
Agamous MADS-box transcription factor (AHRD V1 ***- B2CDE2_9ASPA); contains Interpro domain(s) IPR002487 Transcription factor, K-box
Location(s)
SL2.50ch06:40421183..40426604
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
5422
Nb exon
9
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g064840.2.1 Agamous MADS-box transcription factor (AHRD V1 ***- B2CDE2_9ASPA); contains Interpro domain(s) IPR002487 Transcription factor, K-box

ATGAACTCTCTGTTCTATGTGAAGCTGAGATTGCTCTTATTGTTTTCTCCACACGTGGACGCGTCTATGAATACTCTAACAACAAGTTTCATTAAGGCAACTATTGAACGATACAAGAAGGCAACTGCTGAAACCTCTAATGCTTGCACCACTCAAGAGCTCAATGCTCAGTTTTATCAACAAGAATCAAAAAAGCTGCGCCAACAGATACAAATGATGCAGAATTCAAACAGGCATCTGGTTGGTGAAGGATTAAGTTGTTTGAACGTAAGAGAGCTGAAGCAGTTGGAAAATAGACTTGAACGAGGCATCAGCAGAATCAGATCAAAAAAGCATGAGATGATACTGGCTGAAACTGAGAATTTGCAGAAGAGGGAAATTCTACTGGAACAGGAGAATGCATTCCTTAGATCAAAGATAGCAGAAAATGAGAGGCTTCAGGAACTAAGCATGATGCCAGCAGCAGGAGGACAAGATTACAGTGCAATACAGCAATATTTAGCAAGAAATATGCTTCAACTTAATATGATGGAAGGCCAAGGAGTCTCTTCCTATGATCCATTGCCTCCTCCTCATCATGACAAGAAGTCCCTTGAACTTCAATAAAATCCCCAGCAAGAGGTTTGAGAATTTTACAAAAGAACTTTTAATGTCTACAACCTATCAAGTAATCTCTAATGACTGTATGTTGCTTAAATTAGTACCTTATTTTGTGTATTTGAATTGTTTGTTTTGGGATTTGTAAGAAATTTGAACTTATGATGAGCTTAGAGAGTATGTTGAAGTTCACTTTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g064840.2.1SL2.50ch06:40421182..40426416202+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g064840.2SL2.50ch06:40421183..404266045,422+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g064840.2.1.1SL2.50ch06:40421183..4042126785+n/a
exonexon:Solyc06g064840.2.1.2SL2.50ch06:40421953..404219564+2
exonexon:Solyc06g064840.2.1.3SL2.50ch06:40423800..4042388182+1
exonexon:Solyc06g064840.2.1.4SL2.50ch06:40424024..4042408562+n/a
exonexon:Solyc06g064840.2.1.5SL2.50ch06:40424181..40424280100+1
exonexon:Solyc06g064840.2.1.6SL2.50ch06:40424854..4042489542+n/a
exonexon:Solyc06g064840.2.1.7SL2.50ch06:40425005..4042504642+n/a
exonexon:Solyc06g064840.2.1.8SL2.50ch06:40425780..40425964185+n/a
exonexon:Solyc06g064840.2.1.9SL2.50ch06:40426413..40426604192+1
intronintron:Solyc06g064840.2.1.1SL2.50ch06:40421268..40421952n/a+n/a
intronintron:Solyc06g064840.2.1.2SL2.50ch06:40421957..40423799n/a+n/a
intronintron:Solyc06g064840.2.1.3SL2.50ch06:40423882..40424023n/a+n/a
intronintron:Solyc06g064840.2.1.4SL2.50ch06:40424086..40424180n/a+n/a
intronintron:Solyc06g064840.2.1.5SL2.50ch06:40424281..40424853n/a+n/a
intronintron:Solyc06g064840.2.1.6SL2.50ch06:40424896..40425004n/a+n/a
intronintron:Solyc06g064840.2.1.7SL2.50ch06:40425047..40425779n/a+n/a
intronintron:Solyc06g064840.2.1.8SL2.50ch06:40425965..40426412n/a+n/a
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