Solanum lycopersicum mRNA Solyc06g065040.2.1

mRNA details  
Name
Solyc06g065040.2.1
Type
mRNA
Length
1,221
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch06:40556116..40560821
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4706
Nb exon
5
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g065040.2.1 BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

TCCATCTTCTTCTTTAACCTCACCTTTTTTAAACATAAAAACAACAAAAAATTCACCTGAAGAGAAAAATTAAAGTTAACTTTTGCTAGAAAAAATTTCACCGATGCAACGTGGAACTACCGGTGACGGGGGTGGTGGACTTTCCCGTTTCCGGTCAGCTCCGGCGACATGGTTAGAAGCTCTACTTGAATCCGACACTGAGAGCGAAGTTATTCTTAACCCTTCTTCTCCCATTTTACACACTCCCAATAAACCACCACCTCACCCATCAACTCCGAAGCTTAAGCTGGAAACCGGCGGAGCTACTAGGTTCACTGGCGATCCGGGTCTGTTTGAATCCGGTGGTAGTAGCAATTTTCTCAGGCAGAATAGTTCTCCGGCGGAGTTTCTTTCACATATCAGCTCTGATGGTTACTTCTCAAACTATGGAATTCCGTCCAGTTTGGACTATCTTTCTCCATCCGTTGATGTTTCGCAGTCCGCTAAGCGAACCCGAGACGATGATTCCGAAAGTTCCCCCAGAAAATTAGTATCCCAGTTGAAAGGAGAGTCAAGTGGGCAGTTACATGGTTCTGGTGGGTCACTGGATGCTGAAATGGAGAATCTCATGGATGATTTGGTGCCTTGTAAGGTTCGAGCAAAGCGTGGCTGTGCTACCCATCCTCGCAGCATAGCGGAGCGGGTTCGTCGAACGCGTATAAGTGACAGAATTAGGAAGCTTCAGGAACTGGTGCCAAATATGGACAAGCAAACCAACACAGCCGACATGTTGGAAGAAGCAGTCGAATACGTCAAGTTTCTGCAGAGGCAGATTCAGGAACTTACGGAGCATCAGAAGAAATGCACGTGCTCAATGAAAGATCAATAATGAGAAGAAGAGAGCTCCACTAGAGTATATAGGCAATAGTTTGGTTAGTTGCATGCAGTTTAGAAATGGTAATTCACTCCTATATATCCTATTCTTCTTCATGTGTAGATATTAATGGAAATTTGCAAGAGCTTTGCTACTTTAGAATCCAGAGTCAGCTTTGGCTTTTAATTATTAAATTTAGGTTGTACACTTTTCTGGTGCAGTTGTATCATGTTGTATATGTAGTGTCAATTTGCTTAATAGTCAAATTTCTGCAGCAGAAACACTTCACTTTCTGAAGATGTAATCATGATTTGCAGATCCGTCATGTTAAAATCAATATATATCGTTGCATCAGTGTGAAGTTTAAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g065040.2.1SL2.50ch06:40556218..40560468255+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g065040.2SL2.50ch06:40556116..405608214,706+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g065040.2.1.1SL2.50ch06:40556116..40556656541+n/a
exonexon:Solyc06g065040.2.1.2SL2.50ch06:40557518..40557658141+n/a
exonexon:Solyc06g065040.2.1.3SL2.50ch06:40557772..4055783766+n/a
exonexon:Solyc06g065040.2.1.4SL2.50ch06:40559940..4056000869+n/a
exonexon:Solyc06g065040.2.1.5SL2.50ch06:40560418..40560821404+n/a
intronintron:Solyc06g065040.2.1.1SL2.50ch06:40556657..40557517n/a+n/a
intronintron:Solyc06g065040.2.1.2SL2.50ch06:40557659..40557771n/a+n/a
intronintron:Solyc06g065040.2.1.3SL2.50ch06:40557838..40559939n/a+n/a
intronintron:Solyc06g065040.2.1.4SL2.50ch06:40560009..40560417n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17851163%2Fdetails feature 17851163
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